| Definition | Mesoplasma florum L1, complete genome. |
|---|---|
| Accession | NC_006055 |
| Length | 793,224 |
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The map label for this gene is yeeN [C]
Identifier: 50365363
GI number: 50365363
Start: 639879
End: 640592
Strand: Reverse
Name: yeeN [C]
Synonym: Mfl546
Alternate gene names: 50365363
Gene position: 640592-639879 (Counterclockwise)
Preceding gene: 50365364
Following gene: 50365362
Centisome position: 80.76
GC content: 32.63
Gene sequence:
>714_bases ATGGGAAGAGCACACGAAGTCCGCGCCGCCTCAATGGCTAAAACAGCTGCAAAAAAATCTGCAGCTAATGGTAGAGCAAG TAAAGAAATTTATATGGCAGCCAAAGCAGGTGGATCTGATCCATCTTCAAACTTAGCATTAAGAGCTTTAATTGATAAAG CCAAATCAAATCAAATTCCAAAAGAAGTTATTGATAGAGCTATTAAAAGAGCAACTGGAGGAGACGCAGAAAACTACGTA TCAAATAGATATGAAGGTATGGGTCCAGGAAATACAGCAATTATAGTTGATGCTTTAACAAGTAATGTTAACCGTGCAGC TGCCAATATTAGAGAAGTATTTAATAAAAATCATGGTAATCCCGAAGGAAAAGTTGCTTTTATGTTTGAAGAAGTTTCAA TGTTTGCTTTTAAAGGTAAAACAGAAGAAGAAGTACTTGAACAATTAATGATGAGTGAAGTTGATGTAAATGATGTTGAA GTTGAAGAAGACATGATCATTGTTACAGCTCCATATAAATCATTTAATGCAGTTAAACACTCACTTGATGAATTAGGTAT TGAAGAATACTTAATGTCAGAAATAAAGTTAATTCCAATAGATGACTATATTGAAGTTTCAGATGCTGAATTAAAACAAC AATTACAAACTTTATTGGATAAACTTGATGAATTAGAAGATGTACAAAATGTATATCACAATGCAACTATTTAA
Upstream 100 bases:
>100_bases GATTTTCCATTTTTAGTAATTGATGCAAACAATGATAACTTAAACGAAAAAGTTGAAGAAGTTATAAGAAATATAGAAAA AATTAAAAAGGAGTTTTAAT
Downstream 100 bases:
>100_bases TTAATAAAATCTTTTTATAACACTTAGGTGTTATTTTTTTTATAATCATTATAGGTGATAATATGGATAACTTATTTATT ATAAATTTAATGTTATTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MGRAHEVRAASMAKTAAKKSAANGRASKEIYMAAKAGGSDPSSNLALRALIDKAKSNQIPKEVIDRAIKRATGGDAENYV SNRYEGMGPGNTAIIVDALTSNVNRAAANIREVFNKNHGNPEGKVAFMFEEVSMFAFKGKTEEEVLEQLMMSEVDVNDVE VEEDMIIVTAPYKSFNAVKHSLDELGIEEYLMSEIKLIPIDDYIEVSDAELKQQLQTLLDKLDELEDVQNVYHNATI
Sequences:
>Translated_237_residues MGRAHEVRAASMAKTAAKKSAANGRASKEIYMAAKAGGSDPSSNLALRALIDKAKSNQIPKEVIDRAIKRATGGDAENYV SNRYEGMGPGNTAIIVDALTSNVNRAAANIREVFNKNHGNPEGKVAFMFEEVSMFAFKGKTEEEVLEQLMMSEVDVNDVE VEEDMIIVTAPYKSFNAVKHSLDELGIEEYLMSEIKLIPIDDYIEVSDAELKQQLQTLLDKLDELEDVQNVYHNATI >Mature_236_residues GRAHEVRAASMAKTAAKKSAANGRASKEIYMAAKAGGSDPSSNLALRALIDKAKSNQIPKEVIDRAIKRATGGDAENYVS NRYEGMGPGNTAIIVDALTSNVNRAAANIREVFNKNHGNPEGKVAFMFEEVSMFAFKGKTEEEVLEQLMMSEVDVNDVEV EEDMIIVTAPYKSFNAVKHSLDELGIEEYLMSEIKLIPIDDYIEVSDAELKQQLQTLLDKLDELEDVQNVYHNATI
Specific function: Unknown
COG id: COG0217
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TACO1 family
Homologues:
Organism=Homo sapiens, GI27545315, Length=217, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=3e-13, Organism=Escherichia coli, GI1788294, Length=247, Percent_Identity=41.2955465587045, Blast_Score=167, Evalue=7e-43, Organism=Escherichia coli, GI1788171, Length=214, Percent_Identity=36.4485981308411, Blast_Score=130, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6321458, Length=250, Percent_Identity=31.6, Blast_Score=88, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y546_MESFL (Q6F0R9)
Other databases:
- EMBL: AE017263 - RefSeq: YP_053788.1 - ProteinModelPortal: Q6F0R9 - SMR: Q6F0R9 - GeneID: 2898009 - GenomeReviews: AE017263_GR - KEGG: mfl:Mfl546 - HOGENOM: HBG715231 - OMA: VSHMFDH - ProtClustDB: PRK12378 - BioCyc: MFLO265311:MFL546-MONOMER - HAMAP: MF_00693 - InterPro: IPR002876 - InterPro: IPR017856 - Gene3D: G3DSA:1.10.10.200 - PANTHER: PTHR12532
Pfam domain/function: PF01709 DUF28; SSF75625 DUF28
EC number: NA
Molecular weight: Translated: 26072; Mature: 25941
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRAHEVRAASMAKTAAKKSAANGRASKEIYMAAKAGGSDPSSNLALRALIDKAKSNQIP CCCCHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCCCCHHHHHHHHHHHHHCCCCC KEVIDRAIKRATGGDAENYVSNRYEGMGPGNTAIIVDALTSNVNRAAANIREVFNKNHGN HHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHCCCCC PEGKVAFMFEEVSMFAFKGKTEEEVLEQLMMSEVDVNDVEVEEDMIIVTAPYKSFNAVKH CCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCEEEEECCCHHHHHHHH SLDELGIEEYLMSEIKLIPIDDYIEVSDAELKQQLQTLLDKLDELEDVQNVYHNATI HHHHCCHHHHHHHHCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GRAHEVRAASMAKTAAKKSAANGRASKEIYMAAKAGGSDPSSNLALRALIDKAKSNQIP CCCHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCCCCHHHHHHHHHHHHHCCCCC KEVIDRAIKRATGGDAENYVSNRYEGMGPGNTAIIVDALTSNVNRAAANIREVFNKNHGN HHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHCCCCC PEGKVAFMFEEVSMFAFKGKTEEEVLEQLMMSEVDVNDVEVEEDMIIVTAPYKSFNAVKH CCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCEEEEECCCHHHHHHHH SLDELGIEEYLMSEIKLIPIDDYIEVSDAELKQQLQTLLDKLDELEDVQNVYHNATI HHHHCCHHHHHHHHCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA