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The map label for this gene is oppF [H]

Identifier: 50364912

GI number: 50364912

Start: 118640

End: 120493

Strand: Direct

Name: oppF [H]

Synonym: Mfl097

Alternate gene names: 50364912

Gene position: 118640-120493 (Clockwise)

Preceding gene: 50364911

Following gene: 50364913

Centisome position: 14.96

GC content: 26.91

Gene sequence:

>1854_bases
ATGGCTAAGGAATCAATCATAAAAGTACGTGACCTTTTAATCGAATATGGGCACGGAAAAAATAAAGTTTCTGCTGTTAA
AGAAGTTTCTTTTGATATTTATAAAGGAGAAACTTTTGGACTAGTTGGTGAATCTGGGTCAGGTAAATCAACTATTGGTA
AAGCCTTAATGGGAATTGAACCAATTAATGATGGAACTATTTATTATCAAGATACATTAGCTTTTGGTAAAGCACCAAAT
TTAATTAAGATGAATGAAAAAATGGAACACCATATTAAAGTAATGAAACTTAATCAAACTGCTATTACTAAAGCTTTAGA
AATTTATTCAGAAGAGTACAAACGTGTTTACTTCAAATATATTGAAGGAAAATACTATGATTTAAAATCAAAAGAAACTG
TTGAATATTCTGATAATAAAATTAGAAAAATTGAAGAAGGTTTAGACTTAAAAGATCATAAATTAGTTTCTAAATCAAAA
GATCCAAAATTAAAACTAGTTGAGGATGCTGTTAGAGAAATTATTAAAAGAATTTTAAAATTATACAAACTTCAAGACAA
GTCTTTAGCATTTTTAAAAATGTTAAAAGAAGACGGAATCATTAACCCAGAATTATTAAAAAAAGTTAATGAATTACATT
CAAAAACAAACAAATTAACAGTTAAAATTAGAAAATCAGAATCTAAGATGTATTTAACAATTCAAGAAATTGAAAAAGTT
AGAAATGATGTTAGAAAAGGTAAATATAAATCAGTAAAAAGATTTTTCTTTGATTTAGGTAAACTATTAGAAGTTTTAAT
TGCTGAACATAAATTAGTGTCGCCTATGATTTCTGATTTAAAACAAGCTCAAAAATTAAGTTCTGCAATTGTATCAACAG
GTAGTGATAAAAAACAATGATTAAAATGAATTGATGAAAAAATAGCAACAATCGATGATAAATCAAAAGTTGCCGAATTT
GAATTAATTAAAGATCTAATGTCTATTGAAAGTATTCAAAAAACATTAGAAAAATCACCAAAGTATTCATTACCAACTAG
TTCAGAAAGACATGAATTAAAAAAACAAATGCAAATGATTTTCCAAGACCCAGCATCATCATTAAATGATAGAATGCCAG
TTGAAGAAATTATTGCTGAAGGTTTAGATAATTTCCCTGAATTATACAAAAATGAACAAGCTGCTCAAACTTACATTGAC
TGATTTAATTCAAATAATCCAGATAAAGTAGGAAAAATAACATTAGAAAATATTAGATACCAAAAAGTAAAACAATTTTT
AATTTTACAATTATTAACTACTGTTGGTATGTTACCTGAACACTTGTCACGTTACCCACATGAATTCTCTGGTGGTCAAC
GTCAACGTATCGGTATTGCCAGAGCATTAGTTATGAAACCATCATTTGTAGTTTGTGATGAGCCAATTTCAGCACTAGAC
GTTTCTATTAGAGCACAAGTTATTAATTTATTAGCTAAATTCCAATTAGAATTTGACTTAACATATATATTCATTGCTCA
TGATTTAAGTGTTGTTAGATTTATTGCAAATAGAATTGCAGTTATTTATCGTGGAGATATTGTTGAATTAGCTGATGCTG
ATGAATTATTCAATAATCCTTTACACCCATATACTAAATCATTATTATCTGCAGTACCATTACCAGATCCTGATTTAGAG
AAAAAGAAAAAAAGTATTAAATACAAACCCGAAGAACAACATTTTGATTACATTACAGATTCACCTAAATGAATCGAAGT
TCAAAAAGGACATTTTATATTAGCAAATGAAAGAGAAGTTTCTGCAATAAAATCTGAAAAAAGAAAAATTAAAAAAATCG
AGAAAGGAGCATAA

Upstream 100 bases:

>100_bases
AGAACTTGATTATTAGACCCAAGAGCACCTAAAGTTGAAAAACCTAAAATGTTAGAAAACTTAAAAGAAGCTGTAAGTGA
AGCAAAGGTAGGTGAATAGT

Downstream 100 bases:

>100_bases
TTATGAAAAAATTACTTAGTATAATTGCTGCTGGGACTTTAGTTACAACAGCCGGATCAACTTTAGTTTCTTGTGGAATG
TCTACAACAAAACTAATGGC

Product: oligopeptide ABC transporter ATP-binding component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 617; Mature: 616

Protein sequence:

>617_residues
MAKESIIKVRDLLIEYGHGKNKVSAVKEVSFDIYKGETFGLVGESGSGKSTIGKALMGIEPINDGTIYYQDTLAFGKAPN
LIKMNEKMEHHIKVMKLNQTAITKALEIYSEEYKRVYFKYIEGKYYDLKSKETVEYSDNKIRKIEEGLDLKDHKLVSKSK
DPKLKLVEDAVREIIKRILKLYKLQDKSLAFLKMLKEDGIINPELLKKVNELHSKTNKLTVKIRKSESKMYLTIQEIEKV
RNDVRKGKYKSVKRFFFDLGKLLEVLIAEHKLVSPMISDLKQAQKLSSAIVSTGSDKKQWLKWIDEKIATIDDKSKVAEF
ELIKDLMSIESIQKTLEKSPKYSLPTSSERHELKKQMQMIFQDPASSLNDRMPVEEIIAEGLDNFPELYKNEQAAQTYID
WFNSNNPDKVGKITLENIRYQKVKQFLILQLLTTVGMLPEHLSRYPHEFSGGQRQRIGIARALVMKPSFVVCDEPISALD
VSIRAQVINLLAKFQLEFDLTYIFIAHDLSVVRFIANRIAVIYRGDIVELADADELFNNPLHPYTKSLLSAVPLPDPDLE
KKKKSIKYKPEEQHFDYITDSPKWIEVQKGHFILANEREVSAIKSEKRKIKKIEKGA

Sequences:

>Translated_617_residues
MAKESIIKVRDLLIEYGHGKNKVSAVKEVSFDIYKGETFGLVGESGSGKSTIGKALMGIEPINDGTIYYQDTLAFGKAPN
LIKMNEKMEHHIKVMKLNQTAITKALEIYSEEYKRVYFKYIEGKYYDLKSKETVEYSDNKIRKIEEGLDLKDHKLVSKSK
DPKLKLVEDAVREIIKRILKLYKLQDKSLAFLKMLKEDGIINPELLKKVNELHSKTNKLTVKIRKSESKMYLTIQEIEKV
RNDVRKGKYKSVKRFFFDLGKLLEVLIAEHKLVSPMISDLKQAQKLSSAIVSTGSDKKQ*LK*IDEKIATIDDKSKVAEF
ELIKDLMSIESIQKTLEKSPKYSLPTSSERHELKKQMQMIFQDPASSLNDRMPVEEIIAEGLDNFPELYKNEQAAQTYID
*FNSNNPDKVGKITLENIRYQKVKQFLILQLLTTVGMLPEHLSRYPHEFSGGQRQRIGIARALVMKPSFVVCDEPISALD
VSIRAQVINLLAKFQLEFDLTYIFIAHDLSVVRFIANRIAVIYRGDIVELADADELFNNPLHPYTKSLLSAVPLPDPDLE
KKKKSIKYKPEEQHFDYITDSPK*IEVQKGHFILANEREVSAIKSEKRKIKKIEKGA
>Mature_616_residues
AKESIIKVRDLLIEYGHGKNKVSAVKEVSFDIYKGETFGLVGESGSGKSTIGKALMGIEPINDGTIYYQDTLAFGKAPNL
IKMNEKMEHHIKVMKLNQTAITKALEIYSEEYKRVYFKYIEGKYYDLKSKETVEYSDNKIRKIEEGLDLKDHKLVSKSKD
PKLKLVEDAVREIIKRILKLYKLQDKSLAFLKMLKEDGIINPELLKKVNELHSKTNKLTVKIRKSESKMYLTIQEIEKVR
NDVRKGKYKSVKRFFFDLGKLLEVLIAEHKLVSPMISDLKQAQKLSSAIVSTGSDKKQ*LK*IDEKIATIDDKSKVAEFE
LIKDLMSIESIQKTLEKSPKYSLPTSSERHELKKQMQMIFQDPASSLNDRMPVEEIIAEGLDNFPELYKNEQAAQTYID*
FNSNNPDKVGKITLENIRYQKVKQFLILQLLTTVGMLPEHLSRYPHEFSGGQRQRIGIARALVMKPSFVVCDEPISALDV
SIRAQVINLLAKFQLEFDLTYIFIAHDLSVVRFIANRIAVIYRGDIVELADADELFNNPLHPYTKSLLSAVPLPDPDLEK
KKKSIKYKPEEQHFDYITDSPK*IEVQKGHFILANEREVSAIKSEKRKIKKIEKGA

Specific function: Part of the binding-protein-dependent transport system for oligopeptides. Probably responsible for energy coupling to the transport system [H]

COG id: COG4608

COG function: function code E; ABC-type oligopeptide transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787500, Length=214, Percent_Identity=50.9345794392523, Blast_Score=216, Evalue=5e-57,
Organism=Escherichia coli, GI145693107, Length=211, Percent_Identity=42.654028436019, Blast_Score=177, Evalue=1e-45,
Organism=Escherichia coli, GI1787758, Length=208, Percent_Identity=43.2692307692308, Blast_Score=173, Evalue=3e-44,
Organism=Escherichia coli, GI1789962, Length=209, Percent_Identity=43.0622009569378, Blast_Score=171, Evalue=2e-43,
Organism=Escherichia coli, GI1788506, Length=197, Percent_Identity=38.5786802030457, Blast_Score=143, Evalue=4e-35,
Organism=Escherichia coli, GI48994883, Length=255, Percent_Identity=35.6862745098039, Blast_Score=140, Evalue=3e-34,
Organism=Escherichia coli, GI1787547, Length=197, Percent_Identity=30.9644670050761, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1789963, Length=206, Percent_Identity=35.9223300970874, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI48994997, Length=107, Percent_Identity=42.9906542056075, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1789032, Length=124, Percent_Identity=40.3225806451613, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1789891, Length=254, Percent_Identity=28.740157480315, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1787759, Length=114, Percent_Identity=39.4736842105263, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI1787548, Length=211, Percent_Identity=29.8578199052133, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1786398, Length=137, Percent_Identity=35.7664233576642, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1789672, Length=115, Percent_Identity=37.3913043478261, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI1788225, Length=120, Percent_Identity=39.1666666666667, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1789890, Length=110, Percent_Identity=40, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI1786872, Length=124, Percent_Identity=36.2903225806452, Blast_Score=86, Evalue=8e-18,
Organism=Escherichia coli, GI1787712, Length=132, Percent_Identity=34.0909090909091, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787089, Length=107, Percent_Identity=40.1869158878505, Blast_Score=83, Evalue=7e-17,
Organism=Escherichia coli, GI1788761, Length=102, Percent_Identity=39.2156862745098, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1787370, Length=109, Percent_Identity=34.8623853211009, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1787029, Length=114, Percent_Identity=38.5964912280702, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1788644, Length=118, Percent_Identity=33.0508474576271, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI87081791, Length=117, Percent_Identity=32.4786324786325, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI87081709, Length=107, Percent_Identity=30.8411214953271, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1790467, Length=110, Percent_Identity=31.8181818181818, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788450, Length=121, Percent_Identity=26.4462809917355, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787164, Length=83, Percent_Identity=36.144578313253, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1786563, Length=96, Percent_Identity=39.5833333333333, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI87082267, Length=110, Percent_Identity=30.9090909090909, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1786253, Length=98, Percent_Identity=33.6734693877551, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1790162, Length=111, Percent_Identity=30.6306306306306, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17565938, Length=99, Percent_Identity=44.4444444444444, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193208177, Length=112, Percent_Identity=40.1785714285714, Blast_Score=69, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17543740, Length=293, Percent_Identity=28.6689419795222, Blast_Score=69, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6324985, Length=115, Percent_Identity=37.3913043478261, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI85726357, Length=89, Percent_Identity=46.0674157303371, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR013563 [H]

Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]

EC number: NA

Molecular weight: Translated: 70211; Mature: 70079

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKESIIKVRDLLIEYGHGKNKVSAVKEVSFDIYKGETFGLVGESGSGKSTIGKALMGIE
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCEEEEECCCCCCHHHHHHHHHCCC
PINDGTIYYQDTLAFGKAPNLIKMNEKMEHHIKVMKLNQTAITKALEIYSEEYKRVYFKY
CCCCCEEEEEECHHCCCCCCEEECCHHHHHCEEEEEECHHHHHHHHHHHHHHHHHHHHHH
IEGKYYDLKSKETVEYSDNKIRKIEEGLDLKDHKLVSKSKDPKLKLVEDAVREIIKRILK
HCCEEEECCCCCCEECCCHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LYKLQDKSLAFLKMLKEDGIINPELLKKVNELHSKTNKLTVKIRKSESKMYLTIQEIEKV
HHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEHHHHHHH
RNDVRKGKYKSVKRFFFDLGKLLEVLIAEHKLVSPMISDLKQAQKLSSAIVSTGSDKKQL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHE
KIDEKIATIDDKSKVAEFELIKDLMSIESIQKTLEKSPKYSLPTSSERHELKKQMQMIFQ
EEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
DPASSLNDRMPVEEIIAEGLDNFPELYKNEQAAQTYIDFNSNNPDKVGKITLENIRYQKV
CHHHHHCCCCCHHHHHHHCCCCCHHHHCCCHHHHHEEECCCCCCCHHHEEEHHHHHHHHH
KQFLILQLLTTVGMLPEHLSRYPHEFSGGQRQRIGIARALVMKPSFVVCDEPISALDVSI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHH
RAQVINLLAKFQLEFDLTYIFIAHDLSVVRFIANRIAVIYRGDIVELADADELFNNPLHP
HHHHHHHHHHHHEEEEEEEEEEHHHHHHHHHHHHHHEEEEECCEEEECCHHHHHCCCCCH
YTKSLLSAVPLPDPDLEKKKKSIKYKPEEQHFDYITDSPKIEVQKGHFILANEREVSAIK
HHHHHHHHCCCCCCCHHHHHHCCCCCCCHHCCCCCCCCCCEEEECCEEEEECCHHHHHHH
SEKRKIKKIEKGA
HHHHHHHHHHCCC
>Mature Secondary Structure 
AKESIIKVRDLLIEYGHGKNKVSAVKEVSFDIYKGETFGLVGESGSGKSTIGKALMGIE
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCEEEEECCCCCCHHHHHHHHHCCC
PINDGTIYYQDTLAFGKAPNLIKMNEKMEHHIKVMKLNQTAITKALEIYSEEYKRVYFKY
CCCCCEEEEEECHHCCCCCCEEECCHHHHHCEEEEEECHHHHHHHHHHHHHHHHHHHHHH
IEGKYYDLKSKETVEYSDNKIRKIEEGLDLKDHKLVSKSKDPKLKLVEDAVREIIKRILK
HCCEEEECCCCCCEECCCHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LYKLQDKSLAFLKMLKEDGIINPELLKKVNELHSKTNKLTVKIRKSESKMYLTIQEIEKV
HHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEHHHHHHH
RNDVRKGKYKSVKRFFFDLGKLLEVLIAEHKLVSPMISDLKQAQKLSSAIVSTGSDKKQL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHE
KIDEKIATIDDKSKVAEFELIKDLMSIESIQKTLEKSPKYSLPTSSERHELKKQMQMIFQ
EEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
DPASSLNDRMPVEEIIAEGLDNFPELYKNEQAAQTYIDFNSNNPDKVGKITLENIRYQKV
CHHHHHCCCCCHHHHHHHCCCCCHHHHCCCHHHHHEEECCCCCCCHHHEEEHHHHHHHHH
KQFLILQLLTTVGMLPEHLSRYPHEFSGGQRQRIGIARALVMKPSFVVCDEPISALDVSI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHH
RAQVINLLAKFQLEFDLTYIFIAHDLSVVRFIANRIAVIYRGDIVELADADELFNNPLHP
HHHHHHHHHHHHEEEEEEEEEEHHHHHHHHHHHHHHEEEEECCEEEECCHHHHHCCCCCH
YTKSLLSAVPLPDPDLEKKKKSIKYKPEEQHFDYITDSPKIEVQKGHFILANEREVSAIK
HHHHHHHHCCCCCCCHHHHHHCCCCCCCHHCCCCCCCCCCEEEECCEEEEECCHHHHHHH
SEKRKIKKIEKGA
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]