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The map label for this gene is whiA [H]

Identifier: 50364881

GI number: 50364881

Start: 85127

End: 86080

Strand: Direct

Name: whiA [H]

Synonym: Mfl066

Alternate gene names: 50364881

Gene position: 85127-86080 (Clockwise)

Preceding gene: 50364880

Following gene: 50364882

Centisome position: 10.73

GC content: 25.47

Gene sequence:

>954_bases
ATGTCTTTTGCATTAACAGTTAAAGAAGAAGTTATTTCACACACCTTTGATGATAATTTAGGACAGGCTTTTTTAGCAGG
CTTTATTAAATATAATGGAGACTTCATTTGGGGGTCAGGAACTGAAAAATTAAAACTAACATCAATTAGCAATAAAATAG
CAAGAAGTATTTTTGGTCTTTGCAAAAAAATGTTTGATGGTCATATTGAAATTTCTGTTTCTCAAACTCAAACACTTAAA
CAAAATAAAACTTATCAAATAACTTTGATAGGTAAGATATCAGAGTTTTTAAGAGAATTAAATATTTGAAATGAAAATAA
TACTAAGATAGTTGAATTTAAACCATTAAAGCAAGAAAAAAATAAAGATGAATTAATTAAATTAAAACGTGCTTATATGG
CAGGAGTCTTTGTTTCTGTTGGTTCAGTTAATTCTCCAGAAACTACTAATTATCATCTTGAACTACAATTTAAAGATGAA
GAATCAGCTTTATATATAATAAAATTAATGAATAAGTATGGTTTTGATTTTAAAATTCTAAAAAGAAATGACAAGTTATT
TATTTGTTATATCAAAAAAGCTATTATGGTTTCAGATTTTTTGAAGTTTATTGATGCATATCAAGCAGTAATGAATTTTG
AAAATGAAAGAATTATGCGTGATGTTTCAAATAACGTAAATAGAGTTAATAATATTGATATATCAAATGAAAAGAAAACA
TTATCTGCTGGTCTAAAACAAATAGATCAAATAAGTAAAATTCAAGCCAATTTAGCAACAAAAAGGCTTTCTGAAAAAGC
TGCTTATCTTTGTGATTTGAGAATTCAAAATCCAAATGCGTCTTATGCTGATCTAACAGAACTAATGAATGAATTTGGCT
ATGAAATAACTAAATCAGGTGTAAGCAATTTGTTTAAAATAATCGAAAAACTTAGCTTAGAATTTAATAACTAA

Upstream 100 bases:

>100_bases
TGCATCTCAATATTGAATACCAATATTATTCAGAAAAAATGGATACTTATACGAAAAAGAATATTTTTCAATAAATTAAA
ATTAAGAGGGGAGTGAAATT

Downstream 100 bases:

>100_bases
CATTGGACAAACGGACTTTTTTAATGTTTAATTAAAATAGGAAAAAAGGCGGAAGGAAAATGAAAAAATATGAAAATGAA
AATGAGTTGCTTTTATTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MSFALTVKEEVISHTFDDNLGQAFLAGFIKYNGDFIWGSGTEKLKLTSISNKIARSIFGLCKKMFDGHIEISVSQTQTLK
QNKTYQITLIGKISEFLRELNIWNENNTKIVEFKPLKQEKNKDELIKLKRAYMAGVFVSVGSVNSPETTNYHLELQFKDE
ESALYIIKLMNKYGFDFKILKRNDKLFICYIKKAIMVSDFLKFIDAYQAVMNFENERIMRDVSNNVNRVNNIDISNEKKT
LSAGLKQIDQISKIQANLATKRLSEKAAYLCDLRIQNPNASYADLTELMNEFGYEITKSGVSNLFKIIEKLSLEFNN

Sequences:

>Translated_317_residues
MSFALTVKEEVISHTFDDNLGQAFLAGFIKYNGDFIWGSGTEKLKLTSISNKIARSIFGLCKKMFDGHIEISVSQTQTLK
QNKTYQITLIGKISEFLRELNI*NENNTKIVEFKPLKQEKNKDELIKLKRAYMAGVFVSVGSVNSPETTNYHLELQFKDE
ESALYIIKLMNKYGFDFKILKRNDKLFICYIKKAIMVSDFLKFIDAYQAVMNFENERIMRDVSNNVNRVNNIDISNEKKT
LSAGLKQIDQISKIQANLATKRLSEKAAYLCDLRIQNPNASYADLTELMNEFGYEITKSGVSNLFKIIEKLSLEFNN
>Mature_316_residues
SFALTVKEEVISHTFDDNLGQAFLAGFIKYNGDFIWGSGTEKLKLTSISNKIARSIFGLCKKMFDGHIEISVSQTQTLKQ
NKTYQITLIGKISEFLRELNI*NENNTKIVEFKPLKQEKNKDELIKLKRAYMAGVFVSVGSVNSPETTNYHLELQFKDEE
SALYIIKLMNKYGFDFKILKRNDKLFICYIKKAIMVSDFLKFIDAYQAVMNFENERIMRDVSNNVNRVNNIDISNEKKTL
SAGLKQIDQISKIQANLATKRLSEKAAYLCDLRIQNPNASYADLTELMNEFGYEITKSGVSNLFKIIEKLSLEFNN

Specific function: May be required for sporulation [H]

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478 [H]

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N [H]

EC number: NA

Molecular weight: Translated: 36237; Mature: 36106

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFALTVKEEVISHTFDDNLGQAFLAGFIKYNGDFIWGSGTEKLKLTSISNKIARSIFGL
CCEEEEHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEEHHHHHHHHHHHHH
CKKMFDGHIEISVSQTQTLKQNKTYQITLIGKISEFLRELNINENNTKIVEFKPLKQEKN
HHHHCCCCEEEEECHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCCCEEEEEECCCCCCC
KDELIKLKRAYMAGVFVSVGSVNSPETTNYHLELQFKDEESALYIIKLMNKYGFDFKILK
HHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEEEEECCCCCEEEEEEHHHCCCCEEEEE
RNDKLFICYIKKAIMVSDFLKFIDAYQAVMNFENERIMRDVSNNVNRVNNIDISNEKKTL
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
SAGLKQIDQISKIQANLATKRLSEKAAYLCDLRIQNPNASYADLTELMNEFGYEITKSGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHCHHHHHHHH
SNLFKIIEKLSLEFNN
HHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SFALTVKEEVISHTFDDNLGQAFLAGFIKYNGDFIWGSGTEKLKLTSISNKIARSIFGL
CEEEEHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEEHHHHHHHHHHHHH
CKKMFDGHIEISVSQTQTLKQNKTYQITLIGKISEFLRELNINENNTKIVEFKPLKQEKN
HHHHCCCCEEEEECHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCCCEEEEEECCCCCCC
KDELIKLKRAYMAGVFVSVGSVNSPETTNYHLELQFKDEESALYIIKLMNKYGFDFKILK
HHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEEEEECCCCCEEEEEEHHHCCCCEEEEE
RNDKLFICYIKKAIMVSDFLKFIDAYQAVMNFENERIMRDVSNNVNRVNNIDISNEKKTL
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
SAGLKQIDQISKIQANLATKRLSEKAAYLCDLRIQNPNASYADLTELMNEFGYEITKSGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHCHHHHHHHH
SNLFKIIEKLSLEFNN
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA