Click here to switch to the map view.

The map label for this gene is 50364819

Identifier: 50364819

GI number: 50364819

Start: 3751

End: 4278

Strand: Direct

Name: 50364819

Synonym: Mfl004

Alternate gene names: NA

Gene position: 3751-4278 (Clockwise)

Preceding gene: 50364817

Following gene: 50364820

Centisome position: 0.47

GC content: 21.4

Gene sequence:

>528_bases
ATGGCAAATGAAATAATTATTGTTGAAGGTAAATCAGATTCACAAAAATTAAAGAAAATTTATGGCGAAAATTTAATAAC
ATTCGAAACAAATGGACTAGGAATTGATGATAAAAAATTAAATTCCATAAAAGAATTAAGTAAAAAAAATAAAATTATAA
TTTTTACAGATCCAGACGGACCAGGTAAAAAAATTAGAGAAACAATAATTGAATTTTTAGATGTTGATGTTTTTAATGCA
TTTGTTTCAAAGCAAGATATTGATAAAAATTCTAAAAAAATAGGTTTAGCTGAAGCAAGTGAAGAAGCTATTAAAAAAGC
TTTAGATAATTTAATTACATATAATAAAAAAAATATTTCAATTTCTTGAGATGAATATGTTAAAAATGATTTTTACATAA
AAGCAAACAGAATTATAATTGCTAATCATTTTAATTTGAGTGAAGATATGAGTTCAAAGAGTTTATTCAAATGATTAAAT
TGAATGAATTTAAAAGTTAAAGATATAGAAAAAATAATAGGTGAGTAG

Upstream 100 bases:

>100_bases
CCAAAAACTATTCCTATTTTTTTATCACTCATAATATTCCTCACTTTTCTCACATTAATTATAGTATATAATAAACTTAA
TGTTAGATATAGGTGAATTA

Downstream 100 bases:

>100_bases
AATGAAAGTTGAAGCAAAGAAAAAATTTGGTCAAAACTTTATTAGTGATCAAAATTTAATTAATAAGATAGTTTCAATAT
TAGGTAATGATAAAGATCAA

Product: nucleotidyltransferase, primase

Products: NA

Alternate protein names: ORF L3 [H]

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MANEIIIVEGKSDSQKLKKIYGENLITFETNGLGIDDKKLNSIKELSKKNKIIIFTDPDGPGKKIRETIIEFLDVDVFNA
FVSKQDIDKNSKKIGLAEASEEAIKKALDNLITYNKKNISISWDEYVKNDFYIKANRIIIANHFNLSEDMSSKSLFKWLN
WMNLKVKDIEKIIGE

Sequences:

>Translated_175_residues
MANEIIIVEGKSDSQKLKKIYGENLITFETNGLGIDDKKLNSIKELSKKNKIIIFTDPDGPGKKIRETIIEFLDVDVFNA
FVSKQDIDKNSKKIGLAEASEEAIKKALDNLITYNKKNISIS*DEYVKNDFYIKANRIIIANHFNLSEDMSSKSLFK*LN
*MNLKVKDIEKIIGE
>Mature_174_residues
ANEIIIVEGKSDSQKLKKIYGENLITFETNGLGIDDKKLNSIKELSKKNKIIIFTDPDGPGKKIRETIIEFLDVDVFNAF
VSKQDIDKNSKKIGLAEASEEAIKKALDNLITYNKKNISIS*DEYVKNDFYIKANRIIIANHFNLSEDMSSKSLFK*LN*
MNLKVKDIEKIIGE

Specific function: Unknown

COG id: COG1658

COG function: function code L; Small primase-like proteins (Toprim domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yabF and M.genitalium MG057 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004466
- InterPro:   IPR006171 [H]

Pfam domain/function: PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 19464; Mature: 19333

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANEIIIVEGKSDSQKLKKIYGENLITFETNGLGIDDKKLNSIKELSKKNKIIIFTDPDG
CCCCEEEEECCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCC
PGKKIRETIIEFLDVDVFNAFVSKQDIDKNSKKIGLAEASEEAIKKALDNLITYNKKNIS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCC
ISDEYVKNDFYIKANRIIIANHFNLSEDMSSKSLFKLNMNLKVKDIEKIIGE
CCHHHHCCCEEEEECEEEEEECCCCCCCCCCCEEEEEECCEEHHHHHHHHCC
>Mature Secondary Structure 
ANEIIIVEGKSDSQKLKKIYGENLITFETNGLGIDDKKLNSIKELSKKNKIIIFTDPDG
CCCEEEEECCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCC
PGKKIRETIIEFLDVDVFNAFVSKQDIDKNSKKIGLAEASEEAIKKALDNLITYNKKNIS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCC
ISDEYVKNDFYIKANRIIIANHFNLSEDMSSKSLFKLNMNLKVKDIEKIIGE
CCHHHHCCCEEEEECEEEEEECCCCCCCCCCCEEEEEECCEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8233831 [H]