| Definition | Acinetobacter sp. ADP1 chromosome, complete genome. |
|---|---|
| Accession | NC_005966 |
| Length | 3,598,621 |
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The map label for this gene is 50086584
Identifier: 50086584
GI number: 50086584
Start: 3553114
End: 3554592
Strand: Reverse
Name: 50086584
Synonym: ACIAD3641
Alternate gene names: NA
Gene position: 3554592-3553114 (Counterclockwise)
Preceding gene: 50086585
Following gene: 50086583
Centisome position: 98.78
GC content: 43.88
Gene sequence:
>1479_bases ATGACAGAAACTCGTGAAAACTGGTCATCGCGATCAGGTTTTATTATTGCTGCTGTGGGCTCAGCAGTAGGCTTGGGAAA TATTTGGCGCTTTCCTTATGTGGCCTATGAAAATGGTGGTGGTGCCTTTCTTATTCCTTATTTACTCGCTTTAATTACCG CAGGCTTGCCACTTTTATTTCTGGATTATGCAGTAGGTCATAAAGGAAATGCCTCACCTCCTAAAGCCTATCGTAAATTG TTTAAAGGCGGAGAAACTTTAGGTTGGTGGCAGGTCTGTGTCTGTATCGTGATTGGGCTGTACTACGCCAGTGTGTTAAC GTGGGCAGGTAGTTATATTTACTTCTCCGTCGGCCAAATGTGGGGCAGTAATCCTGAGGCATTTTTCTTTAATACTTATT TGCAAACCAGCAAAGCATCGGGGCTTGATCTGACCTTTGTCAGTCACTTGTTCTGGCCGATTTTAGGGATCTGGGCGCTG ACCTTGATTATTTTGTATGGTGGCGTGAAAAAGGGCGTAGAACTATCCAATAAGATTTTCATGCCGTTGCTCTTTGTTCT GTTTACCATTTTGGTGATTCAGTCCTTACGCTTGCCAGGCGCTGTACAGGGTTTAAATGCATTCTTTACACCAAACTGGT CGGCCATGATGGATTATAAGGTTTGGCTGGCAGCATATGGTCATACCTTTTTCTCACTTTCGGTGGGCTTTGGCATCATG GTGACTTATGCATCGTATTTAAAGCCAAAAACCAATCTTACCGGTTCTGGGCTGATCGTGGGCTTTGCCAATGCATCGAC TGAAATTCTAGCTGGTATTGGTATTTTTGCGGCACTGGGCTTTATGGCGCATGCAGCTGGAACAGAAGTTAAAGATGTGG TGAGCGGTGGTATTGGTCTGGCATTTATTGCCTTTCCTAAAATTATTTCGAGCTTGGGGGCAGGTGCTGATGTTTTTGGC TTACTGTTCTTCTCGTCTTTGTTTGTCGCTGGTATTTCGTCGATGGTTAGTATTTTGGAAGTTCCAATTGCTGCCATGCA AGACAAGCTGAAGTGGGGACGTAAAAAAGCCGTCACCATTATTGGCGGTGGTAGTGCGGTCGTATCGATCTTTCTATTTT CAAGTGTTAATGCCATCAAGCTGGTCGATATTATCGATCATTTCATCAACAATATTGGTATTATCGGCGGTGCATTATTG TCGATTATTACCGTTGCATGGTTCAAGCGCACTGCACTGAAAGAGCTTCGTGATCACGTTAATCGCATCTCGACCATTCA ATTAGGTAAAGGCTGGGATTTCACCTTAACCGTGATTACGTCGCTGATTTTGTTAACGACGCTCAGCATGACGGTATTTA ATTTAATCAAAAATGGCTATGATACTTATAGCGCAAGTTTGCTGGGCATCTTTGGTTGGGGCAGTGTGTTGTTCTGTGCC GTGATTGCTGTAGTACTCAGTAAAATGAAAGATCGCTAG
Upstream 100 bases:
>100_bases GCAGATTTGAGTCCAGCACACATACGATTTTTAAGATGGTATCTTTCTTGCAACGTTCAATAAATAATCTAAGCAAGTGA GACACCTAGGATGATGATTT
Downstream 100 bases:
>100_bases GAGACACACTCATGAATACTTCGGCAATCATTATGATGATTATCTCCATGCTATTTGTATGGGGGGGACTGGTACTTTCG ATTTTACATCTAATGAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MTETRENWSSRSGFIIAAVGSAVGLGNIWRFPYVAYENGGGAFLIPYLLALITAGLPLLFLDYAVGHKGNASPPKAYRKL FKGGETLGWWQVCVCIVIGLYYASVLTWAGSYIYFSVGQMWGSNPEAFFFNTYLQTSKASGLDLTFVSHLFWPILGIWAL TLIILYGGVKKGVELSNKIFMPLLFVLFTILVIQSLRLPGAVQGLNAFFTPNWSAMMDYKVWLAAYGHTFFSLSVGFGIM VTYASYLKPKTNLTGSGLIVGFANASTEILAGIGIFAALGFMAHAAGTEVKDVVSGGIGLAFIAFPKIISSLGAGADVFG LLFFSSLFVAGISSMVSILEVPIAAMQDKLKWGRKKAVTIIGGGSAVVSIFLFSSVNAIKLVDIIDHFINNIGIIGGALL SIITVAWFKRTALKELRDHVNRISTIQLGKGWDFTLTVITSLILLTTLSMTVFNLIKNGYDTYSASLLGIFGWGSVLFCA VIAVVLSKMKDR
Sequences:
>Translated_492_residues MTETRENWSSRSGFIIAAVGSAVGLGNIWRFPYVAYENGGGAFLIPYLLALITAGLPLLFLDYAVGHKGNASPPKAYRKL FKGGETLGWWQVCVCIVIGLYYASVLTWAGSYIYFSVGQMWGSNPEAFFFNTYLQTSKASGLDLTFVSHLFWPILGIWAL TLIILYGGVKKGVELSNKIFMPLLFVLFTILVIQSLRLPGAVQGLNAFFTPNWSAMMDYKVWLAAYGHTFFSLSVGFGIM VTYASYLKPKTNLTGSGLIVGFANASTEILAGIGIFAALGFMAHAAGTEVKDVVSGGIGLAFIAFPKIISSLGAGADVFG LLFFSSLFVAGISSMVSILEVPIAAMQDKLKWGRKKAVTIIGGGSAVVSIFLFSSVNAIKLVDIIDHFINNIGIIGGALL SIITVAWFKRTALKELRDHVNRISTIQLGKGWDFTLTVITSLILLTTLSMTVFNLIKNGYDTYSASLLGIFGWGSVLFCA VIAVVLSKMKDR >Mature_491_residues TETRENWSSRSGFIIAAVGSAVGLGNIWRFPYVAYENGGGAFLIPYLLALITAGLPLLFLDYAVGHKGNASPPKAYRKLF KGGETLGWWQVCVCIVIGLYYASVLTWAGSYIYFSVGQMWGSNPEAFFFNTYLQTSKASGLDLTFVSHLFWPILGIWALT LIILYGGVKKGVELSNKIFMPLLFVLFTILVIQSLRLPGAVQGLNAFFTPNWSAMMDYKVWLAAYGHTFFSLSVGFGIMV TYASYLKPKTNLTGSGLIVGFANASTEILAGIGIFAALGFMAHAAGTEVKDVVSGGIGLAFIAFPKIISSLGAGADVFGL LFFSSLFVAGISSMVSILEVPIAAMQDKLKWGRKKAVTIIGGGSAVVSIFLFSSVNAIKLVDIIDHFINNIGIIGGALLS IITVAWFKRTALKELRDHVNRISTIQLGKGWDFTLTVITSLILLTTLSMTVFNLIKNGYDTYSASLLGIFGWGSVLFCAV IAVVLSKMKDR
Specific function: Putative sodium-dependent transporter [H]
COG id: COG0733
COG function: function code R; Na+-dependent transporters of the SNF family
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family [H]
Homologues:
Organism=Homo sapiens, GI289191351, Length=506, Percent_Identity=28.6561264822134, Blast_Score=206, Evalue=6e-53, Organism=Homo sapiens, GI4557046, Length=506, Percent_Identity=28.6561264822134, Blast_Score=206, Evalue=6e-53, Organism=Homo sapiens, GI289191377, Length=506, Percent_Identity=28.6561264822134, Blast_Score=206, Evalue=6e-53, Organism=Homo sapiens, GI4507041, Length=504, Percent_Identity=26.984126984127, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI4507043, Length=482, Percent_Identity=27.8008298755187, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI92859670, Length=545, Percent_Identity=26.9724770642202, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI188528618, Length=504, Percent_Identity=28.7698412698413, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI21361581, Length=395, Percent_Identity=29.873417721519, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI67782317, Length=506, Percent_Identity=28.8537549407115, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI67782313, Length=506, Percent_Identity=28.8537549407115, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI194018524, Length=516, Percent_Identity=26.1627906976744, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI67782315, Length=518, Percent_Identity=28.3783783783784, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI197276623, Length=341, Percent_Identity=30.4985337243402, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI54607094, Length=341, Percent_Identity=30.4985337243402, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI134304856, Length=347, Percent_Identity=33.7175792507205, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI171184408, Length=443, Percent_Identity=27.5395033860045, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI171184406, Length=443, Percent_Identity=27.5395033860045, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI171184404, Length=443, Percent_Identity=27.5395033860045, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI7657587, Length=409, Percent_Identity=28.1173594132029, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI51468073, Length=521, Percent_Identity=24.5681381957774, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI5032097, Length=347, Percent_Identity=30.2593659942363, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI58219014, Length=306, Percent_Identity=33.6601307189542, Blast_Score=152, Evalue=9e-37, Organism=Homo sapiens, GI33354281, Length=305, Percent_Identity=31.8032786885246, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI218563756, Length=347, Percent_Identity=29.6829971181556, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI11181770, Length=309, Percent_Identity=31.3915857605178, Blast_Score=132, Evalue=8e-31, Organism=Homo sapiens, GI289191353, Length=420, Percent_Identity=25.4761904761905, Blast_Score=130, Evalue=4e-30, Organism=Homo sapiens, GI6005715, Length=386, Percent_Identity=29.5336787564767, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI12408638, Length=286, Percent_Identity=31.1188811188811, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI300360519, Length=220, Percent_Identity=28.6363636363636, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI197276625, Length=113, Percent_Identity=39.8230088495575, Blast_Score=93, Evalue=6e-19, Organism=Homo sapiens, GI21361693, Length=116, Percent_Identity=38.7931034482759, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI218563758, Length=271, Percent_Identity=25.830258302583, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI226437581, Length=257, Percent_Identity=27.2373540856031, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI55749589, Length=313, Percent_Identity=26.1980830670927, Blast_Score=79, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17555248, Length=526, Percent_Identity=26.8060836501901, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI133952791, Length=427, Percent_Identity=30.6791569086651, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI71995588, Length=451, Percent_Identity=26.8292682926829, Blast_Score=164, Evalue=7e-41, Organism=Caenorhabditis elegans, GI25146584, Length=490, Percent_Identity=26.3265306122449, Blast_Score=161, Evalue=9e-40, Organism=Caenorhabditis elegans, GI17535731, Length=548, Percent_Identity=26.2773722627737, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17554804, Length=462, Percent_Identity=27.7056277056277, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI212642127, Length=483, Percent_Identity=26.2939958592132, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71998244, Length=347, Percent_Identity=30.835734870317, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17569475, Length=392, Percent_Identity=26.530612244898, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17542050, Length=566, Percent_Identity=24.2049469964664, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI115534083, Length=469, Percent_Identity=23.2409381663113, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17542048, Length=385, Percent_Identity=21.5584415584416, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24762620, Length=485, Percent_Identity=29.4845360824742, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI19921936, Length=532, Percent_Identity=30.0751879699248, Blast_Score=192, Evalue=5e-49, Organism=Drosophila melanogaster, GI17136952, Length=526, Percent_Identity=28.1368821292776, Blast_Score=191, Evalue=8e-49, Organism=Drosophila melanogaster, GI281364394, Length=481, Percent_Identity=28.4823284823285, Blast_Score=188, Evalue=9e-48, Organism=Drosophila melanogaster, GI28574704, Length=481, Percent_Identity=28.4823284823285, Blast_Score=188, Evalue=9e-48, Organism=Drosophila melanogaster, GI17136950, Length=481, Percent_Identity=28.4823284823285, Blast_Score=188, Evalue=9e-48, Organism=Drosophila melanogaster, GI28574702, Length=481, Percent_Identity=28.4823284823285, Blast_Score=188, Evalue=9e-48, Organism=Drosophila melanogaster, GI24654186, Length=534, Percent_Identity=26.7790262172285, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24661428, Length=522, Percent_Identity=27.5862068965517, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI45550877, Length=532, Percent_Identity=28.0075187969925, Blast_Score=185, Evalue=6e-47, Organism=Drosophila melanogaster, GI45551183, Length=396, Percent_Identity=32.0707070707071, Blast_Score=184, Evalue=8e-47, Organism=Drosophila melanogaster, GI281365034, Length=494, Percent_Identity=27.9352226720648, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI281364136, Length=474, Percent_Identity=28.9029535864979, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24582567, Length=446, Percent_Identity=29.1479820627803, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI19921352, Length=501, Percent_Identity=28.1437125748503, Blast_Score=175, Evalue=6e-44, Organism=Drosophila melanogaster, GI24584353, Length=501, Percent_Identity=28.1437125748503, Blast_Score=175, Evalue=6e-44, Organism=Drosophila melanogaster, GI221329674, Length=506, Percent_Identity=25.296442687747, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI24639514, Length=506, Percent_Identity=25.296442687747, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI281363702, Length=506, Percent_Identity=27.6679841897233, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI45551088, Length=427, Percent_Identity=30.4449648711944, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24652942, Length=427, Percent_Identity=30.4449648711944, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24639516, Length=526, Percent_Identity=24.9049429657795, Blast_Score=168, Evalue=7e-42, Organism=Drosophila melanogaster, GI24655079, Length=534, Percent_Identity=27.7153558052434, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI24639853, Length=401, Percent_Identity=31.9201995012469, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI281363700, Length=339, Percent_Identity=31.2684365781711, Blast_Score=150, Evalue=1e-36, Organism=Drosophila melanogaster, GI24582569, Length=407, Percent_Identity=27.027027027027, Blast_Score=126, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000175 [H]
Pfam domain/function: PF00209 SNF [H]
EC number: NA
Molecular weight: Translated: 53137; Mature: 53006
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS00610 NA_NEUROTRAN_SYMP_1 ; PS50267 NA_NEUROTRAN_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETRENWSSRSGFIIAAVGSAVGLGNIWRFPYVAYENGGGAFLIPYLLALITAGLPLLF CCCCCCCCCCCCCEEEEECCCHHCCCCHHCCCEEEEECCCCEEHHHHHHHHHHCCCHHHH LDYAVGHKGNASPPKAYRKLFKGGETLGWWQVCVCIVIGLYYASVLTWAGSYIYFSVGQM HHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHH WGSNPEAFFFNTYLQTSKASGLDLTFVSHLFWPILGIWALTLIILYGGVKKGVELSNKIF HCCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHH MPLLFVLFTILVIQSLRLPGAVQGLNAFFTPNWSAMMDYKVWLAAYGHTFFSLSVGFGIM HHHHHHHHHHHHHHHHCCCCHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTYASYLKPKTNLTGSGLIVGFANASTEILAGIGIFAALGFMAHAAGTEVKDVVSGGIGL HHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHH AFIAFPKIISSLGAGADVFGLLFFSSLFVAGISSMVSILEVPIAAMQDKLKWGRKKAVTI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE IGGGSAVVSIFLFSSVNAIKLVDIIDHFINNIGIIGGALLSIITVAWFKRTALKELRDHV EECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NRISTIQLGKGWDFTLTVITSLILLTTLSMTVFNLIKNGYDTYSASLLGIFGWGSVLFCA HHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VIAVVLSKMKDR HHHHHHHHHCCC >Mature Secondary Structure TETRENWSSRSGFIIAAVGSAVGLGNIWRFPYVAYENGGGAFLIPYLLALITAGLPLLF CCCCCCCCCCCCEEEEECCCHHCCCCHHCCCEEEEECCCCEEHHHHHHHHHHCCCHHHH LDYAVGHKGNASPPKAYRKLFKGGETLGWWQVCVCIVIGLYYASVLTWAGSYIYFSVGQM HHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHH WGSNPEAFFFNTYLQTSKASGLDLTFVSHLFWPILGIWALTLIILYGGVKKGVELSNKIF HCCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHH MPLLFVLFTILVIQSLRLPGAVQGLNAFFTPNWSAMMDYKVWLAAYGHTFFSLSVGFGIM HHHHHHHHHHHHHHHHCCCCHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTYASYLKPKTNLTGSGLIVGFANASTEILAGIGIFAALGFMAHAAGTEVKDVVSGGIGL HHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHH AFIAFPKIISSLGAGADVFGLLFFSSLFVAGISSMVSILEVPIAAMQDKLKWGRKKAVTI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE IGGGSAVVSIFLFSSVNAIKLVDIIDHFINNIGIIGGALLSIITVAWFKRTALKELRDHV EECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NRISTIQLGKGWDFTLTVITSLILLTTLSMTVFNLIKNGYDTYSASLLGIFGWGSVLFCA HHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VIAVVLSKMKDR HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]