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The map label for this gene is yddQ [H]

Identifier: 50086434

GI number: 50086434

Start: 3398433

End: 3398972

Strand: Direct

Name: yddQ [H]

Synonym: ACIAD3473

Alternate gene names: 50086434

Gene position: 3398433-3398972 (Clockwise)

Preceding gene: 50086432

Following gene: 50086437

Centisome position: 94.44

GC content: 41.85

Gene sequence:

>540_bases
ATGAAACAAGCATTAATGGTCATCGATGTACAAAATGATTATTTTGAAGGTGGAGCGATGGCGCTGGTTCATCCAGAGCA
GGCGTTGCATCATATTCAGCAACTTGAGCGCTGGTTCCTTGCCCAGAATTTACCCATTATTTATATTCAACATATCAACT
CAGCGCAAGCGAGCTTTTTTCGTCCCGATACCAACGGCGCAGAGCTACATTCAGATTTACAATTACAGCGCAATTCAATC
ATTTTACAAAAGCATAAACCCAACAGCTTTTTAGCAACAGATTTAGATCAAATACTGCAACAGCTCTCGGTCAATCAACT
GGTGATTACAGGTATGATGACCCACATGTGTATTGACTCAACAACACGGGCAGCAACTGAACTCGGTTATCAACCCATCC
TGATTGCAGATGCAACAGCCACTCGCGATTTGCATTTTAATGATCAATTAACTTCTGCTCGCGACGTTCAAACGGCTTTT
TTAGCTGCGCTCTCAAATTTTGCAACTATTCAGAAGACACACCAGTTTATTCAAGCTTGA

Upstream 100 bases:

>100_bases
CACTGTGAAAAATAAAGGATGCGTTTTATTTCAACAAACTATCGCTCAGATGATAGGTTACATTTAAGCTCAATCTCATC
CAAACAATTGAGATCATCTC

Downstream 100 bases:

>100_bases
GTCTTTAAAAGCATCATGTTGTATCTTATGAGTAAAAACTCGGATCGGGGACTTTAGCCGTTAAAATCCATTCCCCGATT
TCCTGATATTTGTAATCGAC

Product: isochorismatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKQALMVIDVQNDYFEGGAMALVHPEQALHHIQQLERWFLAQNLPIIYIQHINSAQASFFRPDTNGAELHSDLQLQRNSI
ILQKHKPNSFLATDLDQILQQLSVNQLVITGMMTHMCIDSTTRAATELGYQPILIADATATRDLHFNDQLTSARDVQTAF
LAALSNFATIQKTHQFIQA

Sequences:

>Translated_179_residues
MKQALMVIDVQNDYFEGGAMALVHPEQALHHIQQLERWFLAQNLPIIYIQHINSAQASFFRPDTNGAELHSDLQLQRNSI
ILQKHKPNSFLATDLDQILQQLSVNQLVITGMMTHMCIDSTTRAATELGYQPILIADATATRDLHFNDQLTSARDVQTAF
LAALSNFATIQKTHQFIQA
>Mature_179_residues
MKQALMVIDVQNDYFEGGAMALVHPEQALHHIQQLERWFLAQNLPIIYIQHINSAQASFFRPDTNGAELHSDLQLQRNSI
ILQKHKPNSFLATDLDQILQQLSVNQLVITGMMTHMCIDSTTRAATELGYQPILIADATATRDLHFNDQLTSARDVQTAF
LAALSNFATIQKTHQFIQA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 20181; Mature: 20181

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQALMVIDVQNDYFEGGAMALVHPEQALHHIQQLERWFLAQNLPIIYIQHINSAQASFF
CCCEEEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHC
RPDTNGAELHSDLQLQRNSIILQKHKPNSFLATDLDQILQQLSVNQLVITGMMTHMCIDS
CCCCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
TTRAATELGYQPILIADATATRDLHFNDQLTSARDVQTAFLAALSNFATIQKTHQFIQA
HHHHHHHCCCCCEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQALMVIDVQNDYFEGGAMALVHPEQALHHIQQLERWFLAQNLPIIYIQHINSAQASFF
CCCEEEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHC
RPDTNGAELHSDLQLQRNSIILQKHKPNSFLATDLDQILQQLSVNQLVITGMMTHMCIDS
CCCCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
TTRAATELGYQPILIADATATRDLHFNDQLTSARDVQTAFLAALSNFATIQKTHQFIQA
HHHHHHHCCCCCEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]