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The map label for this gene is yhgF [C]

Identifier: 50086361

GI number: 50086361

Start: 3298894

End: 3301284

Strand: Reverse

Name: yhgF [C]

Synonym: ACIAD3386

Alternate gene names: 50086361

Gene position: 3301284-3298894 (Counterclockwise)

Preceding gene: 50086366

Following gene: 50086360

Centisome position: 91.74

GC content: 44.75

Gene sequence:

>2391_bases
TTGCTTTTAAACCTAATCCTTGTGGAATCGAACACGATGACTGACTTAGTTCAGCAGTTGGCAAGTGAGCTTGCCGTACG
TCCAAACCAAGTAGAAGCTGCCATCCGTTTAATTGATGAAGGTGCCAGTGTTCCTTTTATTGCCCGTTACCGTAAAGAAG
TAACCCAAGGCTTAGACGATACGCAATTACGCCAACTCGACACACGTTTGTCTTATCTGCGTGATTTATATGAACGTCGT
GAAAAAGTCATTGAGTCGCTTAAAGAACAGAATAAACTTTCCGATGATTTATTGGCGCGCGTCAATGCAGCAGAAACTAA
GAACTCTCTTGAAGAGATTTATGCACCGTATCGCCCGAAGCGTACCAGTAAATCATTCAAAGCAAGAGAAGCGGGACTTG
GCCCTATTGCAGAGCAAATCCTGAATGAGCAGATTGAGCCAACTGAAGCTTTGGCAGGATTTAGCCATGAAGATTATTCT
GATAGCGAAAGCCAGTTAGATGCGATCCAGCACATCATCATTGATGACTGGGCACAAAATATTGCACTAACCACAGAGTT
AAAAGCATTGTTTGCCAAAACAGCGACTTTAAAAAGTGCTGTTGCATCTGATGAGAAAAAAGAAGTTGGTAAAAAATTCC
GTGATTATTTTGAATTTTCAGAAAACTTAAATAAAGTTCCATCGCACCGTTTACTTGCAATGTTGCGTGGCCGTCAGGAA
AATGTACTGGGTTTGAAAGTTGATGGTGAAGATGATGCACCCATCGCTCGAATTGAAACTGAATATAATCTGGATCAGGT
ACAACCACAAGCACGTCAGGATTTTTTAAAGCAAACTGCTAAATTATTCTGGTTGGGCAAAATTCGTCCGCAAATTGAAC
ATTCATTGCTGACAGAAAAGCGCCTTGCTGCCGAAGCAGAAGCCATGCAGGTATTTGCCGAAAATTTACGTCATTTATTA
TTGTCTGCACCTGCGGGTGGACGTACCACGTTGGGTGTCGATCCTGGTATTCGTACAGGCGTTAAGCTGGCAGTAGTGAG
CGATGCGGGTGATGTGTTGGCACATAGCACGATTTATCCATTTGCGCCGAAAGAAGATAAAGAAGGTTCGATTGCCGAAC
TTGCACGTTTGTGCCGTGAGTACAATGTTGATCTGGTTGCGATTGGAAATGGGACTGCGAGCCGTGAAACGGAAGCTGTT
ATTGCTGACATGATGGCCGCGAATACAGATCTTAATTTGACGCGTGTAACGGTCAGTGAGGCGGGCGCATCAGTTTATTC
GGCGAGTGAACTTGCCGCGGCTGAACTTCCTGAGCTGGATGTATCCATTCGTGGTGCAGTATCTATTGCACGCCGTTTAC
AGGATCCGTTGGCAGAGCTGGTCAAAATCGATCCAAAATCGATTGGTGTGGGTCAGTACCAGCATGATGTAAACCAGACA
GGATTGGCAAAAACCCTTGATGCAGTGGTTGAAGACTGTGTGAATGCAGTGGGTGTCGATGTGAATACCGCATCTTCTGC
GATCTTGGGTTATATCGCAGGCTTAAACAAAGCCATTGCACAGCAAATTGTAGAATATCGTAAAGAAAATGGTCGTTTTG
ATACCCGTCAATCATTGAAAAAAGTGCCACGTTTAGGCGAACGTACTTTTGAACAGGCGGCTGGTTTCTTGCGTATCCAG
AATGGATCAGAACCACTCGATGCTTCTGCTGTGCATCCAGAAAGTTATAGTTTGGTTGAAAAAATGGTTGAAGCCAAAGC
CACAACTGTAAAAGATATCATTGGAAATTCTGAAATTATCCGCCAGATCAAGGCTGATGATTTTGTCGATGAAAAATTTG
GTTTGCCGACCATTCAGGATGTTTTGGCCGAGCTTGAAAAACCAGGTCGTGACCCACGTCCTGAGTTCCGTACCGCAAAA
TTTCGTGAAGATATCACTGAAATTGCTCAACTGACCGAAGGCATGCAGCTCGAAGGTGTTGTGACTAATGTGACTAACTT
TGGCGCGTTTGTGGATATTGGTGTGCATCAGGACGGTCTGGTACACATTTCTGAGCTAGCTAACGAGTTTGTGTCAGATC
CACATAAAGTGGTGAAACCAGGTCAGATTGTGCAGGTTCGTGTGATTCAAGTCGATGCAGAGCGTAAGCGTGTCAATTTG
AGTATGCGTCCAGAAGGTGCAGAAGCTCCAGCGAAGACACAACGACCACCACGTCGTGAGCAACAAGAACAGCGCGGTGA
ACGTAAGCCGCAGCCAAAACGTCCACAGGCTGCACGTTCAAATGATCAGGCTAAAAAGCCACAACGTGCCAAGCAAGAAA
AACCACAAGAGCAAAAAATTGGTGGTTTGGGCGCATTATTGCTACAAGCTGGAATTAAAGGTTCTAAATAA

Upstream 100 bases:

>100_bases
AATATTTTCAATATTCTGCTCAAAAAGGTACTTTGATTCAAAAAAACGTTTTGAATAAGTAAAACAAGTGTGGATTTTAT
AGTCTCGGTCTTTATAATCA

Downstream 100 bases:

>100_bases
TTTTAATCCTGTTTAAAAAGAAAAAACCACCTTCGGGTGGTTTTTTCTTATGTGCATTACGCTGCTTTAAATTAAATTTA
TTGTCATGAGAATAAAGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 796; Mature: 796

Protein sequence:

>796_residues
MLLNLILVESNTMTDLVQQLASELAVRPNQVEAAIRLIDEGASVPFIARYRKEVTQGLDDTQLRQLDTRLSYLRDLYERR
EKVIESLKEQNKLSDDLLARVNAAETKNSLEEIYAPYRPKRTSKSFKAREAGLGPIAEQILNEQIEPTEALAGFSHEDYS
DSESQLDAIQHIIIDDWAQNIALTTELKALFAKTATLKSAVASDEKKEVGKKFRDYFEFSENLNKVPSHRLLAMLRGRQE
NVLGLKVDGEDDAPIARIETEYNLDQVQPQARQDFLKQTAKLFWLGKIRPQIEHSLLTEKRLAAEAEAMQVFAENLRHLL
LSAPAGGRTTLGVDPGIRTGVKLAVVSDAGDVLAHSTIYPFAPKEDKEGSIAELARLCREYNVDLVAIGNGTASRETEAV
IADMMAANTDLNLTRVTVSEAGASVYSASELAAAELPELDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQT
GLAKTLDAVVEDCVNAVGVDVNTASSAILGYIAGLNKAIAQQIVEYRKENGRFDTRQSLKKVPRLGERTFEQAAGFLRIQ
NGSEPLDASAVHPESYSLVEKMVEAKATTVKDIIGNSEIIRQIKADDFVDEKFGLPTIQDVLAELEKPGRDPRPEFRTAK
FREDITEIAQLTEGMQLEGVVTNVTNFGAFVDIGVHQDGLVHISELANEFVSDPHKVVKPGQIVQVRVIQVDAERKRVNL
SMRPEGAEAPAKTQRPPRREQQEQRGERKPQPKRPQAARSNDQAKKPQRAKQEKPQEQKIGGLGALLLQAGIKGSK

Sequences:

>Translated_796_residues
MLLNLILVESNTMTDLVQQLASELAVRPNQVEAAIRLIDEGASVPFIARYRKEVTQGLDDTQLRQLDTRLSYLRDLYERR
EKVIESLKEQNKLSDDLLARVNAAETKNSLEEIYAPYRPKRTSKSFKAREAGLGPIAEQILNEQIEPTEALAGFSHEDYS
DSESQLDAIQHIIIDDWAQNIALTTELKALFAKTATLKSAVASDEKKEVGKKFRDYFEFSENLNKVPSHRLLAMLRGRQE
NVLGLKVDGEDDAPIARIETEYNLDQVQPQARQDFLKQTAKLFWLGKIRPQIEHSLLTEKRLAAEAEAMQVFAENLRHLL
LSAPAGGRTTLGVDPGIRTGVKLAVVSDAGDVLAHSTIYPFAPKEDKEGSIAELARLCREYNVDLVAIGNGTASRETEAV
IADMMAANTDLNLTRVTVSEAGASVYSASELAAAELPELDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQT
GLAKTLDAVVEDCVNAVGVDVNTASSAILGYIAGLNKAIAQQIVEYRKENGRFDTRQSLKKVPRLGERTFEQAAGFLRIQ
NGSEPLDASAVHPESYSLVEKMVEAKATTVKDIIGNSEIIRQIKADDFVDEKFGLPTIQDVLAELEKPGRDPRPEFRTAK
FREDITEIAQLTEGMQLEGVVTNVTNFGAFVDIGVHQDGLVHISELANEFVSDPHKVVKPGQIVQVRVIQVDAERKRVNL
SMRPEGAEAPAKTQRPPRREQQEQRGERKPQPKRPQAARSNDQAKKPQRAKQEKPQEQKIGGLGALLLQAGIKGSK
>Mature_796_residues
MLLNLILVESNTMTDLVQQLASELAVRPNQVEAAIRLIDEGASVPFIARYRKEVTQGLDDTQLRQLDTRLSYLRDLYERR
EKVIESLKEQNKLSDDLLARVNAAETKNSLEEIYAPYRPKRTSKSFKAREAGLGPIAEQILNEQIEPTEALAGFSHEDYS
DSESQLDAIQHIIIDDWAQNIALTTELKALFAKTATLKSAVASDEKKEVGKKFRDYFEFSENLNKVPSHRLLAMLRGRQE
NVLGLKVDGEDDAPIARIETEYNLDQVQPQARQDFLKQTAKLFWLGKIRPQIEHSLLTEKRLAAEAEAMQVFAENLRHLL
LSAPAGGRTTLGVDPGIRTGVKLAVVSDAGDVLAHSTIYPFAPKEDKEGSIAELARLCREYNVDLVAIGNGTASRETEAV
IADMMAANTDLNLTRVTVSEAGASVYSASELAAAELPELDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQT
GLAKTLDAVVEDCVNAVGVDVNTASSAILGYIAGLNKAIAQQIVEYRKENGRFDTRQSLKKVPRLGERTFEQAAGFLRIQ
NGSEPLDASAVHPESYSLVEKMVEAKATTVKDIIGNSEIIRQIKADDFVDEKFGLPTIQDVLAELEKPGRDPRPEFRTAK
FREDITEIAQLTEGMQLEGVVTNVTNFGAFVDIGVHQDGLVHISELANEFVSDPHKVVKPGQIVQVRVIQVDAERKRVNL
SMRPEGAEAPAKTQRPPRREQQEQRGERKPQPKRPQAARSNDQAKKPQRAKQEKPQEQKIGGLGALLLQAGIKGSK

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=793, Percent_Identity=34.1740226986129, Blast_Score=390, Evalue=1e-108,
Organism=Homo sapiens, GI27597090, Length=393, Percent_Identity=25.9541984732824, Blast_Score=100, Evalue=8e-21,
Organism=Escherichia coli, GI87082262, Length=748, Percent_Identity=53.2085561497326, Blast_Score=753, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=79, Percent_Identity=41.7721518987342, Blast_Score=71, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17511129, Length=742, Percent_Identity=27.8975741239892, Blast_Score=235, Evalue=7e-62,
Organism=Caenorhabditis elegans, GI17552892, Length=310, Percent_Identity=27.4193548387097, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI62484314, Length=762, Percent_Identity=32.0209973753281, Blast_Score=374, Evalue=1e-103,
Organism=Drosophila melanogaster, GI24640080, Length=516, Percent_Identity=22.6744186046512, Blast_Score=85, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 87978; Mature: 87978

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLNLILVESNTMTDLVQQLASELAVRPNQVEAAIRLIDEGASVPFIARYRKEVTQGLDD
CEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCH
TQLRQLDTRLSYLRDLYERREKVIESLKEQNKLSDDLLARVNAAETKNSLEEIYAPYRPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
RTSKSFKAREAGLGPIAEQILNEQIEPTEALAGFSHEDYSDSESQLDAIQHIIIDDWAQN
CCCHHHHHHHCCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
IALTTELKALFAKTATLKSAVASDEKKEVGKKFRDYFEFSENLNKVPSHRLLAMLRGRQE
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
NVLGLKVDGEDDAPIARIETEYNLDQVQPQARQDFLKQTAKLFWLGKIRPQIEHSLLTEK
CEEEEEECCCCCCCEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RLAAEAEAMQVFAENLRHLLLSAPAGGRTTLGVDPGIRTGVKLAVVSDAGDVLAHSTIYP
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEEECCCHHHHCCCCCC
FAPKEDKEGSIAELARLCREYNVDLVAIGNGTASRETEAVIADMMAANTDLNLTRVTVSE
CCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHH
AGASVYSASELAAAELPELDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQT
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHH
GLAKTLDAVVEDCVNAVGVDVNTASSAILGYIAGLNKAIAQQIVEYRKENGRFDTRQSLK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
KVPRLGERTFEQAAGFLRIQNGSEPLDASAVHPESYSLVEKMVEAKATTVKDIIGNSEII
HHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
RQIKADDFVDEKFGLPTIQDVLAELEKPGRDPRPEFRTAKFREDITEIAQLTEGMQLEGV
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECHH
VTNVTNFGAFVDIGVHQDGLVHISELANEFVSDPHKVVKPGQIVQVRVIQVDAERKRVNL
HHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHCCCCCEEEEEEEEEECCHHHEEE
SMRPEGAEAPAKTQRPPRREQQEQRGERKPQPKRPQAARSNDQAKKPQRAKQEKPQEQKI
EECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHCCCHHHHHCCCHHHHH
GGLGALLLQAGIKGSK
HHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLLNLILVESNTMTDLVQQLASELAVRPNQVEAAIRLIDEGASVPFIARYRKEVTQGLDD
CEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCH
TQLRQLDTRLSYLRDLYERREKVIESLKEQNKLSDDLLARVNAAETKNSLEEIYAPYRPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
RTSKSFKAREAGLGPIAEQILNEQIEPTEALAGFSHEDYSDSESQLDAIQHIIIDDWAQN
CCCHHHHHHHCCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
IALTTELKALFAKTATLKSAVASDEKKEVGKKFRDYFEFSENLNKVPSHRLLAMLRGRQE
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
NVLGLKVDGEDDAPIARIETEYNLDQVQPQARQDFLKQTAKLFWLGKIRPQIEHSLLTEK
CEEEEEECCCCCCCEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RLAAEAEAMQVFAENLRHLLLSAPAGGRTTLGVDPGIRTGVKLAVVSDAGDVLAHSTIYP
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEEECCCHHHHCCCCCC
FAPKEDKEGSIAELARLCREYNVDLVAIGNGTASRETEAVIADMMAANTDLNLTRVTVSE
CCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHH
AGASVYSASELAAAELPELDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQT
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHH
GLAKTLDAVVEDCVNAVGVDVNTASSAILGYIAGLNKAIAQQIVEYRKENGRFDTRQSLK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
KVPRLGERTFEQAAGFLRIQNGSEPLDASAVHPESYSLVEKMVEAKATTVKDIIGNSEII
HHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
RQIKADDFVDEKFGLPTIQDVLAELEKPGRDPRPEFRTAKFREDITEIAQLTEGMQLEGV
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECHH
VTNVTNFGAFVDIGVHQDGLVHISELANEFVSDPHKVVKPGQIVQVRVIQVDAERKRVNL
HHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHCCCCCEEEEEEEEEECCHHHEEE
SMRPEGAEAPAKTQRPPRREQQEQRGERKPQPKRPQAARSNDQAKKPQRAKQEKPQEQKI
EECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHCCCHHHHHCCCHHHHH
GGLGALLLQAGIKGSK
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]