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The map label for this gene is lemA [H]

Identifier: 50086327

GI number: 50086327

Start: 3251571

End: 3252161

Strand: Reverse

Name: lemA [H]

Synonym: ACIAD3347

Alternate gene names: 50086327

Gene position: 3252161-3251571 (Counterclockwise)

Preceding gene: 50086328

Following gene: 50086326

Centisome position: 90.37

GC content: 42.13

Gene sequence:

>591_bases
ATGAATTTATTTAAAAAATTAGCACTTTCGACTGTCTTGGCAAGTACGCTGGTATTTTCTGGATGTGGCTATAATACTTT
ACAGGCAAAAGATGAGTCGGTTACGGCTGCTTGGTCAGAAGTTCAGAACCAGTATCAACGTCGCGCAGATTTGGTGCCAA
ATCTGGTTAATGTGGTGAAGGGATATGCCAAACATGAACAACAGGTCCTGACTGATGTGACTCAGGCACGATCCAATGTA
GCTGGTCTAAAAGTAGATAAAGAAGTACTCGAAGACCCACAATTATTTGAAAAATACCAGCAAGCACAAAGTCAATTAAC
AGGTGCTTTGTCACGCTTGATTGCTGTTTCTGAAAATTATCCAGACTTGAAAGCAAATGAGCAGTTCCGTGATTTGCAGG
TACAACTTGAAGGTACTGAAAACCGTATTGCTGTTGCGCGTAACCGTTATATTACAACGGTTCAGGATTACAATACTTAC
GTTCGTCAGTTCCCACAGGCGATGACCGCAAAAGTGATTGGTATGCACACCAAGCAAAACTTTAGTGCTGACGCGGGTGC
AGAGAAAGCGCCCACAGTATCGTTTAATTAA

Upstream 100 bases:

>100_bases
ACCCGTTTTTTATGTATTAAAGAAAATACACAACAATCGACTTTATTCCTCGCTACAATGTCTCTAAAGCAAAAATATCA
AGAAACATGAGGTTAGTTAT

Downstream 100 bases:

>100_bases
GTTTACTGAGCTGGGGTGATCATGATTCAAAAGAAAATGGCCATGTCTCGACAGTTCATCATACAGCTGTTTTTGGCATT
GCTGTTATGTTGTTTGACGA

Product: signal peptide

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MNLFKKLALSTVLASTLVFSGCGYNTLQAKDESVTAAWSEVQNQYQRRADLVPNLVNVVKGYAKHEQQVLTDVTQARSNV
AGLKVDKEVLEDPQLFEKYQQAQSQLTGALSRLIAVSENYPDLKANEQFRDLQVQLEGTENRIAVARNRYITTVQDYNTY
VRQFPQAMTAKVIGMHTKQNFSADAGAEKAPTVSFN

Sequences:

>Translated_196_residues
MNLFKKLALSTVLASTLVFSGCGYNTLQAKDESVTAAWSEVQNQYQRRADLVPNLVNVVKGYAKHEQQVLTDVTQARSNV
AGLKVDKEVLEDPQLFEKYQQAQSQLTGALSRLIAVSENYPDLKANEQFRDLQVQLEGTENRIAVARNRYITTVQDYNTY
VRQFPQAMTAKVIGMHTKQNFSADAGAEKAPTVSFN
>Mature_196_residues
MNLFKKLALSTVLASTLVFSGCGYNTLQAKDESVTAAWSEVQNQYQRRADLVPNLVNVVKGYAKHEQQVLTDVTQARSNV
AGLKVDKEVLEDPQLFEKYQQAQSQLTGALSRLIAVSENYPDLKANEQFRDLQVQLEGTENRIAVARNRYITTVQDYNTY
VRQFPQAMTAKVIGMHTKQNFSADAGAEKAPTVSFN

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 21909; Mature: 21909

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLFKKLALSTVLASTLVFSGCGYNTLQAKDESVTAAWSEVQNQYQRRADLVPNLVNVVK
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYAKHEQQVLTDVTQARSNVAGLKVDKEVLEDPQLFEKYQQAQSQLTGALSRLIAVSENY
HHHHHHHHHHHHHHHHHHHHCCCEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDLKANEQFRDLQVQLEGTENRIAVARNRYITTVQDYNTYVRQFPQAMTAKVIGMHTKQN
CCCCCCCCHHEEEEEEECCCCEEEEHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FSADAGAEKAPTVSFN
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNLFKKLALSTVLASTLVFSGCGYNTLQAKDESVTAAWSEVQNQYQRRADLVPNLVNVVK
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYAKHEQQVLTDVTQARSNVAGLKVDKEVLEDPQLFEKYQQAQSQLTGALSRLIAVSENY
HHHHHHHHHHHHHHHHHHHHCCCEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDLKANEQFRDLQVQLEGTENRIAVARNRYITTVQDYNTYVRQFPQAMTAKVIGMHTKQN
CCCCCCCCHHEEEEEEECCCCEEEEHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FSADAGAEKAPTVSFN
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]