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The map label for this gene is glcD [H]

Identifier: 50086286

GI number: 50086286

Start: 3207551

End: 3208960

Strand: Reverse

Name: glcD [H]

Synonym: ACIAD3300

Alternate gene names: 50086286

Gene position: 3208960-3207551 (Counterclockwise)

Preceding gene: 50086290

Following gene: 50086285

Centisome position: 89.17

GC content: 42.55

Gene sequence:

>1410_bases
ATGAATGCTCCAGTCGCTTTAACACCTGAGTTACTTACCCAGTTAACAGCTATTGTTGGTGAAAACCGCATTAAAACCGA
CACCGATAGTCTTGAAAATTGGGGGCGAGATTACACCAAGCATTTTGATCCAAACCCATCAGTCATCGTTTTTCCTTCGA
CCACAGAAGAAGTGCAGGCGATTGTAAAACTTGCGAATCAGTTTAATGTTGCGATTACACCATCGGGTGGTCGTACTGGC
CTTTCTGCGGGTGCTGTGGCTGCCAATCGTGAAATCGTGATCAGCATGGACAAGATGAACCAAATTCTGGAATTCTTTCC
TGCAGATCGTATGGTGCGTGTACAGGCAGGTGTGGTGACCGAACAATTACAGCGCTATGCCGAAGAGCAAGGCATGTATT
ATCCAGTCGATTTCGCTTCGGCAGGTTCAAGCCAGATCGGTGGAAATATTGGCACCAATGCAGGTGGTATTAAGGTCATT
AAATATGGCATGACCCGTAATTGGGTGCTCGGTCTGACAGTTGTGACGGGTAAAGGTGATATCCTGCGTCTGAATAAAGG
CATGATCAAAAATGCAACAGGTTATGCGCTACAGCATCTATTTATTGGTGGTGAAGGGACATTGGGCTTAGTCACGGAAG
CTGAAATCAAACTGGAGCGTCAACCACAGAATCTACAGGTGATGGTACTGGGTGTTCCAGATTTTGAAGCAGTCATGCCT
GTATTACATGCATTCCAAAAGGATATTGATTTAACGGCATTTGAGTTCTTTGGCGAACTTGCCATGCAAAAAGTACTCGA
TCATGGTCATGTGCAACGTCCATTCGAAACGCAATGCCCATTTTATGTGCTACTTGAGTTTGAAGCACCGTATGAGCCGA
TTATGGACAAAGCCATGCAGATTTTTGAACACTGTATGGAACAAGGCTGGGTACTTGACGGCGTGATGAGCCAGAGTCTG
GATCAGGTCGAAAGCTTGTGGCGTCTGCGTGAAGATATTTCTGAGTCAATTGCACCGTTTATTCCATATAAAAATGATAT
TTCAGTGTTGATTACGCATGTTCCAGCATTTATTCAAGAAATTGATGCAATTGTGCAGGAAAACTATCCTGACTTTGAGA
TTTGCTGGTTTGGTCATATTGGTGATGGTAATTTGCATTTAAATATTCTCAAACCTGCAGATTTGACCAAAGATGAGTTT
TTTGCCAAATGTCAGGTAGTGAATAAGTATGTATTTGATACCGTAAAAAAATATAATGGATCAATTTCGGCAGAGCATGG
TGTAGGCATGACTAAAAAACCATATCTTGAATATACGCGCTCGCCAGAAGAAATTGAATATATGAAAGCCCTCAAACTGG
CATTTGATCCGAAAGGAATTATGAACCCAGGGAAACTCTTTGATTTATAA

Upstream 100 bases:

>100_bases
TTCTATCTGAATCAGAAGCTTTATCCTGCGACTGCTTACATGTAAAATAAATCTAGATTCCCTCAATCCTCCTGTTTATT
TCTTGCTAGGCCTGTAAACG

Downstream 100 bases:

>100_bases
TATAAATCATGCCGAGGACTACATAGTTACTACAGTGTAACTGAAAAAGGCGTAGCATCATAAAGCTACGCCTTTTTGTT
TTTTGATGTGTGAAAGAGAT

Product: FAD/FMN-containing dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MNAPVALTPELLTQLTAIVGENRIKTDTDSLENWGRDYTKHFDPNPSVIVFPSTTEEVQAIVKLANQFNVAITPSGGRTG
LSAGAVAANREIVISMDKMNQILEFFPADRMVRVQAGVVTEQLQRYAEEQGMYYPVDFASAGSSQIGGNIGTNAGGIKVI
KYGMTRNWVLGLTVVTGKGDILRLNKGMIKNATGYALQHLFIGGEGTLGLVTEAEIKLERQPQNLQVMVLGVPDFEAVMP
VLHAFQKDIDLTAFEFFGELAMQKVLDHGHVQRPFETQCPFYVLLEFEAPYEPIMDKAMQIFEHCMEQGWVLDGVMSQSL
DQVESLWRLREDISESIAPFIPYKNDISVLITHVPAFIQEIDAIVQENYPDFEICWFGHIGDGNLHLNILKPADLTKDEF
FAKCQVVNKYVFDTVKKYNGSISAEHGVGMTKKPYLEYTRSPEEIEYMKALKLAFDPKGIMNPGKLFDL

Sequences:

>Translated_469_residues
MNAPVALTPELLTQLTAIVGENRIKTDTDSLENWGRDYTKHFDPNPSVIVFPSTTEEVQAIVKLANQFNVAITPSGGRTG
LSAGAVAANREIVISMDKMNQILEFFPADRMVRVQAGVVTEQLQRYAEEQGMYYPVDFASAGSSQIGGNIGTNAGGIKVI
KYGMTRNWVLGLTVVTGKGDILRLNKGMIKNATGYALQHLFIGGEGTLGLVTEAEIKLERQPQNLQVMVLGVPDFEAVMP
VLHAFQKDIDLTAFEFFGELAMQKVLDHGHVQRPFETQCPFYVLLEFEAPYEPIMDKAMQIFEHCMEQGWVLDGVMSQSL
DQVESLWRLREDISESIAPFIPYKNDISVLITHVPAFIQEIDAIVQENYPDFEICWFGHIGDGNLHLNILKPADLTKDEF
FAKCQVVNKYVFDTVKKYNGSISAEHGVGMTKKPYLEYTRSPEEIEYMKALKLAFDPKGIMNPGKLFDL
>Mature_469_residues
MNAPVALTPELLTQLTAIVGENRIKTDTDSLENWGRDYTKHFDPNPSVIVFPSTTEEVQAIVKLANQFNVAITPSGGRTG
LSAGAVAANREIVISMDKMNQILEFFPADRMVRVQAGVVTEQLQRYAEEQGMYYPVDFASAGSSQIGGNIGTNAGGIKVI
KYGMTRNWVLGLTVVTGKGDILRLNKGMIKNATGYALQHLFIGGEGTLGLVTEAEIKLERQPQNLQVMVLGVPDFEAVMP
VLHAFQKDIDLTAFEFFGELAMQKVLDHGHVQRPFETQCPFYVLLEFEAPYEPIMDKAMQIFEHCMEQGWVLDGVMSQSL
DQVESLWRLREDISESIAPFIPYKNDISVLITHVPAFIQEIDAIVQENYPDFEICWFGHIGDGNLHLNILKPADLTKDEF
FAKCQVVNKYVFDTVKKYNGSISAEHGVGMTKKPYLEYTRSPEEIEYMKALKLAFDPKGIMNPGKLFDL

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=447, Percent_Identity=35.3467561521253, Blast_Score=278, Evalue=5e-75,
Organism=Homo sapiens, GI37595756, Length=471, Percent_Identity=27.3885350318471, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI37595754, Length=494, Percent_Identity=26.5182186234818, Blast_Score=181, Evalue=2e-45,
Organism=Homo sapiens, GI4501993, Length=472, Percent_Identity=24.7881355932203, Blast_Score=103, Evalue=3e-22,
Organism=Escherichia coli, GI1789351, Length=432, Percent_Identity=27.5462962962963, Blast_Score=170, Evalue=2e-43,
Organism=Escherichia coli, GI1787977, Length=499, Percent_Identity=25.6513026052104, Blast_Score=129, Evalue=6e-31,
Organism=Escherichia coli, GI48994907, Length=498, Percent_Identity=22.8915662650602, Blast_Score=87, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17534361, Length=455, Percent_Identity=32.0879120879121, Blast_Score=244, Evalue=5e-65,
Organism=Caenorhabditis elegans, GI71992373, Length=465, Percent_Identity=27.3118279569892, Blast_Score=169, Evalue=4e-42,
Organism=Caenorhabditis elegans, GI71992381, Length=465, Percent_Identity=26.6666666666667, Blast_Score=158, Evalue=6e-39,
Organism=Caenorhabditis elegans, GI71992392, Length=368, Percent_Identity=27.1739130434783, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17556096, Length=224, Percent_Identity=29.0178571428571, Blast_Score=88, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6320023, Length=476, Percent_Identity=33.8235294117647, Blast_Score=275, Evalue=9e-75,
Organism=Saccharomyces cerevisiae, GI6320764, Length=474, Percent_Identity=31.0126582278481, Blast_Score=240, Evalue=4e-64,
Organism=Saccharomyces cerevisiae, GI6320027, Length=446, Percent_Identity=29.1479820627803, Blast_Score=168, Evalue=2e-42,
Organism=Drosophila melanogaster, GI18921117, Length=468, Percent_Identity=32.0512820512821, Blast_Score=253, Evalue=1e-67,
Organism=Drosophila melanogaster, GI24639277, Length=468, Percent_Identity=32.0512820512821, Blast_Score=253, Evalue=1e-67,
Organism=Drosophila melanogaster, GI24639275, Length=468, Percent_Identity=32.0512820512821, Blast_Score=253, Evalue=1e-67,
Organism=Drosophila melanogaster, GI24653753, Length=199, Percent_Identity=29.6482412060301, Blast_Score=91, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 52388; Mature: 52388

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPVALTPELLTQLTAIVGENRIKTDTDSLENWGRDYTKHFDPNPSVIVFPSTTEEVQA
CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHCCCCCCCEEEECCCHHHHHH
IVKLANQFNVAITPSGGRTGLSAGAVAANREIVISMDKMNQILEFFPADRMVRVQAGVVT
HHHHHHHCCEEEECCCCCCCCCCCCEECCCEEEEEHHHHHHHHHHCCCCCEEEEHHHHHH
EQLQRYAEEQGMYYPVDFASAGSSQIGGNIGTNAGGIKVIKYGMTRNWVLGLTVVTGKGD
HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCC
ILRLNKGMIKNATGYALQHLFIGGEGTLGLVTEAEIKLERQPQNLQVMVLGVPDFEAVMP
EEEECCCCCCCCCHHEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEECCCHHHHHH
VLHAFQKDIDLTAFEFFGELAMQKVLDHGHVQRPFETQCPFYVLLEFEAPYEPIMDKAMQ
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHH
IFEHCMEQGWVLDGVMSQSLDQVESLWRLREDISESIAPFIPYKNDISVLITHVPAFIQE
HHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
IDAIVQENYPDFEICWFGHIGDGNLHLNILKPADLTKDEFFAKCQVVNKYVFDTVKKYNG
HHHHHHCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
SISAEHGVGMTKKPYLEYTRSPEEIEYMKALKLAFDPKGIMNPGKLFDL
CEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNAPVALTPELLTQLTAIVGENRIKTDTDSLENWGRDYTKHFDPNPSVIVFPSTTEEVQA
CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHCCCCCCCEEEECCCHHHHHH
IVKLANQFNVAITPSGGRTGLSAGAVAANREIVISMDKMNQILEFFPADRMVRVQAGVVT
HHHHHHHCCEEEECCCCCCCCCCCCEECCCEEEEEHHHHHHHHHHCCCCCEEEEHHHHHH
EQLQRYAEEQGMYYPVDFASAGSSQIGGNIGTNAGGIKVIKYGMTRNWVLGLTVVTGKGD
HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCC
ILRLNKGMIKNATGYALQHLFIGGEGTLGLVTEAEIKLERQPQNLQVMVLGVPDFEAVMP
EEEECCCCCCCCCHHEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEECCCHHHHHH
VLHAFQKDIDLTAFEFFGELAMQKVLDHGHVQRPFETQCPFYVLLEFEAPYEPIMDKAMQ
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHH
IFEHCMEQGWVLDGVMSQSLDQVESLWRLREDISESIAPFIPYKNDISVLITHVPAFIQE
HHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
IDAIVQENYPDFEICWFGHIGDGNLHLNILKPADLTKDEFFAKCQVVNKYVFDTVKKYNG
HHHHHHCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
SISAEHGVGMTKKPYLEYTRSPEEIEYMKALKLAFDPKGIMNPGKLFDL
CEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]