Click here to switch to the map view.

The map label for this gene is 50086256

Identifier: 50086256

GI number: 50086256

Start: 3178909

End: 3180027

Strand: Reverse

Name: 50086256

Synonym: ACIAD3266

Alternate gene names: NA

Gene position: 3180027-3178909 (Counterclockwise)

Preceding gene: 50086257

Following gene: 50086254

Centisome position: 88.37

GC content: 41.55

Gene sequence:

>1119_bases
GTGAATCTTATAAAACAGGACTGGTTTTCAGATTTAAAACCCAACTTTAAAGTGCTTTCTTTCAAAGAGCGTTTTCTTTG
CGCTGTAGGAGCATTACTTGGTCTTGCTATATCCTCATGGATCAGCTGGTCTGTGCTCGGTGGTCTCAACGTATGGTATA
TCGCGCCAATGGGGGCATCATCTGTTTTACTTTTTGCTGTGCCATCAAGTCCCCTGGCTCAACCCTGGAATGTGATCGTT
GGAAATTTATTGGCAGGTCTGATTGGTGTGAGCTGTGCCATGTGGATTCCAGATTTAACCACTGCATTTAGTCTGGCTGT
GGGATTGGCGATTTTTCTGATGATGAGTACAGATTCATTGCATCCGCCGAGTGGTGCAGTTGCGATTACGGCGGTACTGG
GTGGCAAGGCTATTCACCAATTGGGCTATTATTTTGTGTTGTACCCAGTTTTACTCAATTCTGTATTATTGTTGGCTTTT
GCCGTTTGTTTCAATCGTTTAATGGGACGTCATTATCCTTATCCCAAGCAGATAAATAGCCGTTCAAAAGATCCGACACC
TACTCAAAAAGTAGGCATTCAGCCACAGGATATTCAGCGTGCTTTAAATGAACAAACGGAGCTACTTGATATTAGCCAGT
ATGATCTGGAAAAAATTATTCTGGAAGCACAGGAGCTTGCTAACGAGCGCCGGGTTATTCATTTTGTCTGTCGGGATATT
ATGACTAAAGATGTAATCACCCTGTATCAGGAGGATGATATTCATCAGTCATTAGATAAATTCAAGCATGTTAATTTAAT
GAGTTTACCCGTTATTGATGCAGAGCAACAGCTTGTAGGCACACTCGCATTGTACGATGTGGTGGAATGGTTTAAACGTG
CGGCAGATCCGAGAGCACCTTGGGAATTTATGGTGAAGCAAATCATGAATCGGAAAGTTGTGACCGTCAACCCAGAACAG
CCTATTCAGGATCTGGTGCCTTATTTTGTAGAAAAATCCTTTAATTATATTCCTGTACTTGAGAAGGAAAAATTAGTTGG
AATAATTAGTCGTGCGGATATGATTGCAGCTTTACAGCAACAACTGATCAATCTGAATATAGAGCATTCTACTCAATAA

Upstream 100 bases:

>100_bases
TATTCTACACACTAAGATGAAGATATAATTTAAATACATTTTAAGATTAGTTTGCATATACTACCGACACTTGGTCAGAA
AAATTACACCTAGGTGAGAT

Downstream 100 bases:

>100_bases
AAAAAAGCTACGGTTGAGCTTAGGGGGTAACAACCGTAGCGACCAAGTGCGGTCAAAAGGTTTGGTGTTTATCGGCGTTG
ATGATCTTCATGAACAGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: CBS Domain-Containing Protein; CBS Domain Containing Membrane Protein; HPP Family Protein+B; Cbs Domain Containing Membrane Protein; HPP Domain-Containing Protein; HPP Family Membrane Protein; HPP Family/CBS Domain-Containing Protein; CBS Domain-Containing Membrane Protein; CbsHpp; CBS-Domain-Containing Membrane Protein; Signal Transduction Protein; HPP Domain And CBS Domain Pair-Containing Protein; Conserved Protein; Transmembrane Protein; Tryptophan Synthase Alpha Chain; HPP Family; HPP Domain Protein; CBS Domain Pair Family

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MNLIKQDWFSDLKPNFKVLSFKERFLCAVGALLGLAISSWISWSVLGGLNVWYIAPMGASSVLLFAVPSSPLAQPWNVIV
GNLLAGLIGVSCAMWIPDLTTAFSLAVGLAIFLMMSTDSLHPPSGAVAITAVLGGKAIHQLGYYFVLYPVLLNSVLLLAF
AVCFNRLMGRHYPYPKQINSRSKDPTPTQKVGIQPQDIQRALNEQTELLDISQYDLEKIILEAQELANERRVIHFVCRDI
MTKDVITLYQEDDIHQSLDKFKHVNLMSLPVIDAEQQLVGTLALYDVVEWFKRAADPRAPWEFMVKQIMNRKVVTVNPEQ
PIQDLVPYFVEKSFNYIPVLEKEKLVGIISRADMIAALQQQLINLNIEHSTQ

Sequences:

>Translated_372_residues
MNLIKQDWFSDLKPNFKVLSFKERFLCAVGALLGLAISSWISWSVLGGLNVWYIAPMGASSVLLFAVPSSPLAQPWNVIV
GNLLAGLIGVSCAMWIPDLTTAFSLAVGLAIFLMMSTDSLHPPSGAVAITAVLGGKAIHQLGYYFVLYPVLLNSVLLLAF
AVCFNRLMGRHYPYPKQINSRSKDPTPTQKVGIQPQDIQRALNEQTELLDISQYDLEKIILEAQELANERRVIHFVCRDI
MTKDVITLYQEDDIHQSLDKFKHVNLMSLPVIDAEQQLVGTLALYDVVEWFKRAADPRAPWEFMVKQIMNRKVVTVNPEQ
PIQDLVPYFVEKSFNYIPVLEKEKLVGIISRADMIAALQQQLINLNIEHSTQ
>Mature_372_residues
MNLIKQDWFSDLKPNFKVLSFKERFLCAVGALLGLAISSWISWSVLGGLNVWYIAPMGASSVLLFAVPSSPLAQPWNVIV
GNLLAGLIGVSCAMWIPDLTTAFSLAVGLAIFLMMSTDSLHPPSGAVAITAVLGGKAIHQLGYYFVLYPVLLNSVLLLAF
AVCFNRLMGRHYPYPKQINSRSKDPTPTQKVGIQPQDIQRALNEQTELLDISQYDLEKIILEAQELANERRVIHFVCRDI
MTKDVITLYQEDDIHQSLDKFKHVNLMSLPVIDAEQQLVGTLALYDVVEWFKRAADPRAPWEFMVKQIMNRKVVTVNPEQ
PIQDLVPYFVEKSFNYIPVLEKEKLVGIISRADMIAALQQQLINLNIEHSTQ

Specific function: Unknown

COG id: COG3448

COG function: function code T; CBS-domain-containing membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41795; Mature: 41795

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLIKQDWFSDLKPNFKVLSFKERFLCAVGALLGLAISSWISWSVLGGLNVWYIAPMGAS
CCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
SVLLFAVPSSPLAQPWNVIVGNLLAGLIGVSCAMWIPDLTTAFSLAVGLAIFLMMSTDSL
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HPPSGAVAITAVLGGKAIHQLGYYFVLYPVLLNSVLLLAFAVCFNRLMGRHYPYPKQINS
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCC
RSKDPTPTQKVGIQPQDIQRALNEQTELLDISQYDLEKIILEAQELANERRVIHFVCRDI
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTKDVITLYQEDDIHQSLDKFKHVNLMSLPVIDAEQQLVGTLALYDVVEWFKRAADPRAP
HHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
WEFMVKQIMNRKVVTVNPEQPIQDLVPYFVEKSFNYIPVLEKEKLVGIISRADMIAALQQ
HHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
QLINLNIEHSTQ
HHHCCCCCCCCC
>Mature Secondary Structure
MNLIKQDWFSDLKPNFKVLSFKERFLCAVGALLGLAISSWISWSVLGGLNVWYIAPMGAS
CCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
SVLLFAVPSSPLAQPWNVIVGNLLAGLIGVSCAMWIPDLTTAFSLAVGLAIFLMMSTDSL
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HPPSGAVAITAVLGGKAIHQLGYYFVLYPVLLNSVLLLAFAVCFNRLMGRHYPYPKQINS
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCC
RSKDPTPTQKVGIQPQDIQRALNEQTELLDISQYDLEKIILEAQELANERRVIHFVCRDI
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTKDVITLYQEDDIHQSLDKFKHVNLMSLPVIDAEQQLVGTLALYDVVEWFKRAADPRAP
HHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
WEFMVKQIMNRKVVTVNPEQPIQDLVPYFVEKSFNYIPVLEKEKLVGIISRADMIAALQQ
HHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
QLINLNIEHSTQ
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA