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The map label for this gene is ycbK [H]

Identifier: 50086092

GI number: 50086092

Start: 3007958

End: 3008935

Strand: Direct

Name: ycbK [H]

Synonym: ACIAD3081

Alternate gene names: 50086092

Gene position: 3007958-3008935 (Clockwise)

Preceding gene: 50086087

Following gene: 50086094

Centisome position: 83.59

GC content: 36.81

Gene sequence:

>978_bases
TTGAAGGGTTTCACTCTACAATTTAACTATTATTTTTATATTTTTCATTTCATGAGATTTTCCTTCTCACCAGTTCAAAC
TGGTTCATTATGCGCGGTTTCTGCTGCATTTTTATTTAGTACAAAAGCAATATTCATCAAACAAGCTTATGCTCTTTCAC
CTTTGGTAGATGCAACATTGCTTATGGCACTTCGCATGATCAGCGCCTTACCCTTCTTTTTACTTTTATGCTGGTTTAAT
CGCCATCATAATCAAGCCATTTCGGCAAAAGATTGGCTTGTTTTAATTTTCTCTGGGCTTTTAGGGTATTACTTTGCAAG
CTGGTTAGATTTTATGGGTCTGATGTTGATCAGTGCATCACTTGAACGCATTATTTTATTTTTATATCCAACACTCACTG
TTTTAGCTTCTTCTTTTCTTTATCATCAAAAATTAAATATAAAAACTTGGTTTGCCATTTTTCTGAGTTATGGAGGAACC
GTTTTAGTGATGTTACAAGAGGGTAAAAATGCACCAAGTCAGGGCGGTTTTTGGTTGGGTGCAAGTCTCGTATTTGCCAG
TGCAGTTGCCTTTGCAGTTTACCTTCTTTTAACTCCTGCTTTAATTAAGAAATTTGGTTCATGGAACTTTACAGGTTTGG
CTTCAAGTGTTGCCTGCTTAGGTACTATCATGCATTATTTAATTGCCACTCCTGCACCATTAACGGTCATCAATGAATTA
CCATTGGCTGTATGGGGTTACGGTATCAGTTTGGGGTTTTTCGTCACGGTAATTCCAACCATATTGCTCATGCAAGGTAT
CCAGCGATTAGGCGCCTCTCAATCTGCAATGATTGCCTCAATTGGCCCTATTTTAACCATTTTACTTGCTGTCATCTTTT
TAAATGAACAATTAAACTTGTGGCAATGGCTAGGCTGTGTACTTAACATTTTAGGCGTACTGCTAATTACTTTAAGTAAA
ACCCGTTTAAAACATTAA

Upstream 100 bases:

>100_bases
GGATTCTAATTGAACTTTTTCAAATTACCACCCACTATTTATTTAATAAATACCTATATTTTGAACTAGCAATTCATCTT
TCTAGAATAAAAATATAAAA

Downstream 100 bases:

>100_bases
TCTTCTGTATCAAGCTGTTCAATCTGGTATTGAACCCTCTGAAAATGTGCGCCATTTGATTGGCTCGCATAATGATCATC
AGGATTACGTAGCGGACATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MKGFTLQFNYYFYIFHFMRFSFSPVQTGSLCAVSAAFLFSTKAIFIKQAYALSPLVDATLLMALRMISALPFFLLLCWFN
RHHNQAISAKDWLVLIFSGLLGYYFASWLDFMGLMLISASLERIILFLYPTLTVLASSFLYHQKLNIKTWFAIFLSYGGT
VLVMLQEGKNAPSQGGFWLGASLVFASAVAFAVYLLLTPALIKKFGSWNFTGLASSVACLGTIMHYLIATPAPLTVINEL
PLAVWGYGISLGFFVTVIPTILLMQGIQRLGASQSAMIASIGPILTILLAVIFLNEQLNLWQWLGCVLNILGVLLITLSK
TRLKH

Sequences:

>Translated_325_residues
MKGFTLQFNYYFYIFHFMRFSFSPVQTGSLCAVSAAFLFSTKAIFIKQAYALSPLVDATLLMALRMISALPFFLLLCWFN
RHHNQAISAKDWLVLIFSGLLGYYFASWLDFMGLMLISASLERIILFLYPTLTVLASSFLYHQKLNIKTWFAIFLSYGGT
VLVMLQEGKNAPSQGGFWLGASLVFASAVAFAVYLLLTPALIKKFGSWNFTGLASSVACLGTIMHYLIATPAPLTVINEL
PLAVWGYGISLGFFVTVIPTILLMQGIQRLGASQSAMIASIGPILTILLAVIFLNEQLNLWQWLGCVLNILGVLLITLSK
TRLKH
>Mature_325_residues
MKGFTLQFNYYFYIFHFMRFSFSPVQTGSLCAVSAAFLFSTKAIFIKQAYALSPLVDATLLMALRMISALPFFLLLCWFN
RHHNQAISAKDWLVLIFSGLLGYYFASWLDFMGLMLISASLERIILFLYPTLTVLASSFLYHQKLNIKTWFAIFLSYGGT
VLVMLQEGKNAPSQGGFWLGASLVFASAVAFAVYLLLTPALIKKFGSWNFTGLASSVACLGTIMHYLIATPAPLTVINEL
PLAVWGYGISLGFFVTVIPTILLMQGIQRLGASQSAMIASIGPILTILLAVIFLNEQLNLWQWLGCVLNILGVLLITLSK
TRLKH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 36109; Mature: 36109

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGFTLQFNYYFYIFHFMRFSFSPVQTGSLCAVSAAFLFSTKAIFIKQAYALSPLVDATL
CCCEEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMALRMISALPFFLLLCWFNRHHNQAISAKDWLVLIFSGLLGYYFASWLDFMGLMLISAS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LERIILFLYPTLTVLASSFLYHQKLNIKTWFAIFLSYGGTVLVMLQEGKNAPSQGGFWLG
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHH
ASLVFASAVAFAVYLLLTPALIKKFGSWNFTGLASSVACLGTIMHYLIATPAPLTVINEL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHC
PLAVWGYGISLGFFVTVIPTILLMQGIQRLGASQSAMIASIGPILTILLAVIFLNEQLNL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
WQWLGCVLNILGVLLITLSKTRLKH
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKGFTLQFNYYFYIFHFMRFSFSPVQTGSLCAVSAAFLFSTKAIFIKQAYALSPLVDATL
CCCEEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMALRMISALPFFLLLCWFNRHHNQAISAKDWLVLIFSGLLGYYFASWLDFMGLMLISAS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LERIILFLYPTLTVLASSFLYHQKLNIKTWFAIFLSYGGTVLVMLQEGKNAPSQGGFWLG
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHH
ASLVFASAVAFAVYLLLTPALIKKFGSWNFTGLASSVACLGTIMHYLIATPAPLTVINEL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHC
PLAVWGYGISLGFFVTVIPTILLMQGIQRLGASQSAMIASIGPILTILLAVIFLNEQLNL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
WQWLGCVLNILGVLLITLSKTRLKH
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7704254; 9384377 [H]