| Definition | Acinetobacter sp. ADP1 chromosome, complete genome. |
|---|---|
| Accession | NC_005966 |
| Length | 3,598,621 |
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The map label for this gene is thrS
Identifier: 50086067
GI number: 50086067
Start: 2981193
End: 2983115
Strand: Reverse
Name: thrS
Synonym: ACIAD3055
Alternate gene names: 50086067
Gene position: 2983115-2981193 (Counterclockwise)
Preceding gene: 50086069
Following gene: 50086066
Centisome position: 82.9
GC content: 43.06
Gene sequence:
>1923_bases ATGCCAATTATCACATTGCCAAATGGCGATCAAAAATCATTTGATCAACCTGTCTCCGTTATGCAAGTCGCCCAAAGTAT AGGGCCTGGTCTTGCTAAAAATACCGTCGCGGGTCGTGTTAATGATCGTCTAGTCGATGCATGTGACCTGATCACTGAAG ATGCCACCTTGCAGATTATTACGCCTAAAGATCCTGAAGGTGTGGAAATCATTCGTCACTCTTGTGCACATCTGGTTGGA CATGCGGTAAAACAATTGTTTCCAGACGTACAGATGGTCATTGGTCCAGTGATTGAAGAAGGGTTTTACTACGACATCTT TAGTCCAAAGCCATTTACGCTAGACGACATGGCTGCAATCGAAGCGCGTATGAAGCAATTGATTGATCAGGACTATGATG TTGTAAAAAAAATGACACCAAGAGAACAAGTCATTCAAGAATTTACAACACGTGGTGAAACCTACAAGCTACGCTTGATT GATGACATGCCCGAAGAAACTCAAATGGGTTTGTACTATCATCAAGAATACGTTGACATGTGCCGTGGTCCGCATGTACC AAACACTAAGTTTCTGAAAAATTTTAAATTAACAAAAATTTCTGGTGCATATTGGCGCGGTGATGCCAAAAATGAACAGC TTCAGCGTATTTACGGTACTGCTTGGTCAGACAAGAAAGAACTCGCAGCCTATATTAAGCGTATTGAAGAAGCTGAAAAA CGTGATCACCGTAAAATTGGTAAAGCACTTGATTTGTTTCATATGCAGGAAGAAGCACCAGGTATGGTGTTTTGGCACGC CAATGGCTGGACCATTTATCAAGCGCTTGAACAATACATGCGTAAAGTTCAGCAAGACAACGGCTACCAAGAAGTCCGTA CGCCACAAATTGTCGACTTTACACTTTGGGAAAAGTCGGGACATGCTGCCAATTATGCAGAAAACATGTTTACCACACAT TCAGAAAGCCGTAACTATGCCGTCAAGCCAATGAACTGTCCATGTCACGTACAGGTTTTTAATCAAGGCTTGAAATCGTA CCGTGACCTTCCTGTGCGTTTGGCTGAGTTTGGTTCGTGTCACCGTAACGAGCCGTCAGGTTCATTGCACGGTATTATGC GTGTACGTGGCTTTACTCAAGACGATGGTCATATTTTCTGTACCAAAGAACAGATTGGTAAAGAAGTGGCAGACTTTATT CAGTTGACGCTTGATGTCTACAAAGACTTTGGCTTTGAAGATGTTCAAATGAAACTGTCTACGCGTCCTGAAAAACGTGT TGGCGATGATAGACTTTGGGATTTAGCAGAAAAATCATTGGCTGATGCCTTGGATGCTGCGGGTCTTGAATGGGAATTAC AGCCGGGTGAAGGTGCATTCTACGGTCCAAAAATTGAATTCTCGTTGAAAGATTGCTTAGGCCGTGTCTGGCAATGCGGT ACCATTCAATGTGACTTTAACTTACCAATACGTCTAGATGCTTCTTTTGTGACAGAAGACAATGAACGTGATCAGCCTGT GATGTTGCACCGTGCAATACTTGGCAGTTTCGAGCGTTTTATTGGTATACTTATTGAACACTATGCGGGTTTTATGCCAC CTTGGTTGGCGCCAGTGCAAGCTTGCGTGATGAATATTACCGATTCACAGGCTGAAGCATGTCAACAAGTGGTGGCAAAA CTCAAAGAAAATGGTCTTAGAGCGATTTCTGACTTGAGAAATGAGAAAATCGGCTTTAAGATTCGTGAGCGTACACTTGA GCGTATTCCGTACCTTTTAGTATTAGGTGACCGTGAGGTTGAGGAAGGTACTGTTAATGTTCGTACTCGCTCAGGAAAAA ATTTAGGTACTATGTCAATCGATGCATTCGTTGACTTAGTGAAATCTGCCGTTGCCGAACGTGGCCGGTACATTGTGGAG TAA
Upstream 100 bases:
>100_bases TTTATTCATCCACCGTTTTTATCTTTTGAGGCTTACCTCGATCATAATCTCGCGGTGATATGCTCCATTGTGCGGGGCAT CACTCCTTAAGGATTTTCTT
Downstream 100 bases:
>100_bases GAGAGATTAAACAGCCTGACCGTAACCAACAACAAGGTGCAAAGAGTAACCGTCCTGCGATTAATGACGAGATTCGTTCT AAAGAAGTGCGTCTCGTTGG
Product: threonyl-tRNA synthetase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS
Number of amino acids: Translated: 640; Mature: 639
Protein sequence:
>640_residues MPIITLPNGDQKSFDQPVSVMQVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDATLQIITPKDPEGVEIIRHSCAHLVG HAVKQLFPDVQMVIGPVIEEGFYYDIFSPKPFTLDDMAAIEARMKQLIDQDYDVVKKMTPREQVIQEFTTRGETYKLRLI DDMPEETQMGLYYHQEYVDMCRGPHVPNTKFLKNFKLTKISGAYWRGDAKNEQLQRIYGTAWSDKKELAAYIKRIEEAEK RDHRKIGKALDLFHMQEEAPGMVFWHANGWTIYQALEQYMRKVQQDNGYQEVRTPQIVDFTLWEKSGHAANYAENMFTTH SESRNYAVKPMNCPCHVQVFNQGLKSYRDLPVRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDGHIFCTKEQIGKEVADFI QLTLDVYKDFGFEDVQMKLSTRPEKRVGDDRLWDLAEKSLADALDAAGLEWELQPGEGAFYGPKIEFSLKDCLGRVWQCG TIQCDFNLPIRLDASFVTEDNERDQPVMLHRAILGSFERFIGILIEHYAGFMPPWLAPVQACVMNITDSQAEACQQVVAK LKENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNLGTMSIDAFVDLVKSAVAERGRYIVE
Sequences:
>Translated_640_residues MPIITLPNGDQKSFDQPVSVMQVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDATLQIITPKDPEGVEIIRHSCAHLVG HAVKQLFPDVQMVIGPVIEEGFYYDIFSPKPFTLDDMAAIEARMKQLIDQDYDVVKKMTPREQVIQEFTTRGETYKLRLI DDMPEETQMGLYYHQEYVDMCRGPHVPNTKFLKNFKLTKISGAYWRGDAKNEQLQRIYGTAWSDKKELAAYIKRIEEAEK RDHRKIGKALDLFHMQEEAPGMVFWHANGWTIYQALEQYMRKVQQDNGYQEVRTPQIVDFTLWEKSGHAANYAENMFTTH SESRNYAVKPMNCPCHVQVFNQGLKSYRDLPVRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDGHIFCTKEQIGKEVADFI QLTLDVYKDFGFEDVQMKLSTRPEKRVGDDRLWDLAEKSLADALDAAGLEWELQPGEGAFYGPKIEFSLKDCLGRVWQCG TIQCDFNLPIRLDASFVTEDNERDQPVMLHRAILGSFERFIGILIEHYAGFMPPWLAPVQACVMNITDSQAEACQQVVAK LKENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNLGTMSIDAFVDLVKSAVAERGRYIVE >Mature_639_residues PIITLPNGDQKSFDQPVSVMQVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDATLQIITPKDPEGVEIIRHSCAHLVGH AVKQLFPDVQMVIGPVIEEGFYYDIFSPKPFTLDDMAAIEARMKQLIDQDYDVVKKMTPREQVIQEFTTRGETYKLRLID DMPEETQMGLYYHQEYVDMCRGPHVPNTKFLKNFKLTKISGAYWRGDAKNEQLQRIYGTAWSDKKELAAYIKRIEEAEKR DHRKIGKALDLFHMQEEAPGMVFWHANGWTIYQALEQYMRKVQQDNGYQEVRTPQIVDFTLWEKSGHAANYAENMFTTHS ESRNYAVKPMNCPCHVQVFNQGLKSYRDLPVRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDGHIFCTKEQIGKEVADFIQ LTLDVYKDFGFEDVQMKLSTRPEKRVGDDRLWDLAEKSLADALDAAGLEWELQPGEGAFYGPKIEFSLKDCLGRVWQCGT IQCDFNLPIRLDASFVTEDNERDQPVMLHRAILGSFERFIGILIEHYAGFMPPWLAPVQACVMNITDSQAEACQQVVAKL KENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNLGTMSIDAFVDLVKSAVAERGRYIVE
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0441
COG function: function code J; Threonyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI38202255, Length=632, Percent_Identity=40.3481012658228, Blast_Score=466, Evalue=1e-131, Organism=Homo sapiens, GI38570111, Length=633, Percent_Identity=38.7045813586098, Blast_Score=452, Evalue=1e-127, Organism=Homo sapiens, GI20070344, Length=636, Percent_Identity=36.4779874213836, Blast_Score=387, Evalue=1e-107, Organism=Escherichia coli, GI1788013, Length=636, Percent_Identity=62.2641509433962, Blast_Score=860, Evalue=0.0, Organism=Caenorhabditis elegans, GI71984184, Length=630, Percent_Identity=38.0952380952381, Blast_Score=444, Evalue=1e-125, Organism=Caenorhabditis elegans, GI71984192, Length=630, Percent_Identity=38.0952380952381, Blast_Score=444, Evalue=1e-125, Organism=Saccharomyces cerevisiae, GI6322112, Length=638, Percent_Identity=38.0877742946708, Blast_Score=435, Evalue=1e-123, Organism=Saccharomyces cerevisiae, GI6322654, Length=420, Percent_Identity=38.3333333333333, Blast_Score=295, Evalue=1e-80, Organism=Drosophila melanogaster, GI24583842, Length=627, Percent_Identity=39.8724082934609, Blast_Score=480, Evalue=1e-135, Organism=Drosophila melanogaster, GI28574141, Length=627, Percent_Identity=39.8724082934609, Blast_Score=480, Evalue=1e-135, Organism=Drosophila melanogaster, GI24583839, Length=627, Percent_Identity=39.8724082934609, Blast_Score=479, Evalue=1e-135,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYT_ACIAD (Q6F860)
Other databases:
- EMBL: CR543861 - RefSeq: YP_047577.1 - ProteinModelPortal: Q6F860 - SMR: Q6F860 - STRING: Q6F860 - GeneID: 2880751 - GenomeReviews: CR543861_GR - KEGG: aci:ACIAD3055 - NMPDR: fig|62977.3.peg.2770 - eggNOG: COG0441 - HOGENOM: HBG352811 - OMA: GFEYEVE - PhylomeDB: Q6F860 - ProtClustDB: PRK00413 - BioCyc: ASP62977:ACIAD3055-MONOMER - GO: GO:0005737 - HAMAP: MF_00184_B - InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR012675 - InterPro: IPR004095 - InterPro: IPR012676 - InterPro: IPR002320 - InterPro: IPR018163 - InterPro: IPR012947 - Gene3D: G3DSA:3.40.50.800 - Gene3D: G3DSA:3.10.20.30 - PRINTS: PR01047 - SMART: SM00863 - TIGRFAMs: TIGR00418
Pfam domain/function: PF03129 HGTP_anticodon; PF02824 TGS; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD; SSF52954 Anticodon_bd; SSF81271 TGS-like; SSF55186 Thr/Ala-tRNA-synth_IIc_edit
EC number: =6.1.1.3
Molecular weight: Translated: 72997; Mature: 72866
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIITLPNGDQKSFDQPVSVMQVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDATLQII CCEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHCCHHCCHHHHHHHHHHHHCCCCEEEEE TPKDPEGVEIIRHSCAHLVGHAVKQLFPDVQMVIGPVIEEGFYYDIFSPKPFTLDDMAAI CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHH EARMKQLIDQDYDVVKKMTPREQVIQEFTTRGETYKLRLIDDMPEETQMGLYYHQEYVDM HHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHCCHHHHHHHHHH CRGPHVPNTKFLKNFKLTKISGAYWRGDAKNEQLQRIYGTAWSDKKELAAYIKRIEEAEK HCCCCCCCHHHHHCCCEEEECCCEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH RDHRKIGKALDLFHMQEEAPGMVFWHANGWTIYQALEQYMRKVQQDNGYQEVRTPQIVDF HHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHCCCCEEEE TLWEKSGHAANYAENMFTTHSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPVRLAEFGSC EEECCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCC HRNEPSGSLHGIMRVRGFTQDDGHIFCTKEQIGKEVADFIQLTLDVYKDFGFEDVQMKLS CCCCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC TRPEKRVGDDRLWDLAEKSLADALDAAGLEWELQPGEGAFYGPKIEFSLKDCLGRVWQCG CCCHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEECCEEEEEHHHHHHHHHCCC TIQCDFNLPIRLDASFVTEDNERDQPVMLHRAILGSFERFIGILIEHYAGFMPPWLAPVQ EEEECCCCCEEECCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ACVMNITDSQAEACQQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREV HHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCC EEGTVNVRTRSGKNLGTMSIDAFVDLVKSAVAERGRYIVE CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PIITLPNGDQKSFDQPVSVMQVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDATLQII CEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHCCHHCCHHHHHHHHHHHHCCCCEEEEE TPKDPEGVEIIRHSCAHLVGHAVKQLFPDVQMVIGPVIEEGFYYDIFSPKPFTLDDMAAI CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHH EARMKQLIDQDYDVVKKMTPREQVIQEFTTRGETYKLRLIDDMPEETQMGLYYHQEYVDM HHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHCCHHHHHHHHHH CRGPHVPNTKFLKNFKLTKISGAYWRGDAKNEQLQRIYGTAWSDKKELAAYIKRIEEAEK HCCCCCCCHHHHHCCCEEEECCCEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH RDHRKIGKALDLFHMQEEAPGMVFWHANGWTIYQALEQYMRKVQQDNGYQEVRTPQIVDF HHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHCCCCEEEE TLWEKSGHAANYAENMFTTHSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPVRLAEFGSC EEECCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCC HRNEPSGSLHGIMRVRGFTQDDGHIFCTKEQIGKEVADFIQLTLDVYKDFGFEDVQMKLS CCCCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC TRPEKRVGDDRLWDLAEKSLADALDAAGLEWELQPGEGAFYGPKIEFSLKDCLGRVWQCG CCCHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEECCEEEEEHHHHHHHHHCCC TIQCDFNLPIRLDASFVTEDNERDQPVMLHRAILGSFERFIGILIEHYAGFMPPWLAPVQ EEEECCCCCEEECCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ACVMNITDSQAEACQQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREV HHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCC EEGTVNVRTRSGKNLGTMSIDAFVDLVKSAVAERGRYIVE CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA