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The map label for this gene is ibp [H]

Identifier: 50086065

GI number: 50086065

Start: 2980033

End: 2980527

Strand: Direct

Name: ibp [H]

Synonym: ACIAD3053

Alternate gene names: 50086065

Gene position: 2980033-2980527 (Clockwise)

Preceding gene: 50086062

Following gene: 50086068

Centisome position: 82.81

GC content: 35.96

Gene sequence:

>495_bases
TTGCTGAATGATCAGGAGGTTTTATCAATGAGTAGTGTCAGTTTAAGTCCATTATTTCGTCGTAGTATCGGTTTTGATCG
TTTGAATGATCTATTTGATTATGCCATGCAATCTGAAACACCGAATTATCCCCCTTATAATATCGAAAAAGATGGAGAAA
ATAATTATCGGATTTTGATTGCTAGCGCAGGCTTCGATCAGGATGAACTTCGCATCCATCTTGAAAATCAGGTGTTAACT
ATTAGTGGTCAACCTGATTCCGAACAGGTAGATAAAAATATTGAATATTTACATAAAGGGATTGCTCGGCGAGCATTTAA
ATTATCGTTACGTCTGGATGAACACATTGAAGTACAACAGGCAGACTATGAAAATGGTTTGCTCAAAATTGAGTTACAAC
GCATTATTCCAGAAGAAAAAATGCCTCGTCAGATTCCAATTGGCCAGTCTAAAAGCATCAAAAACATTGAAAGCAGTAAA
ATTGTGAATTCTTGA

Upstream 100 bases:

>100_bases
AAAGACGATCCTATATTTTATTTAGCAACAATTTGGCGATGTTGCAAATTCTTGATTGATGCCACGGTATGTTCATCAAT
CTATTCTTATTCATATGACT

Downstream 100 bases:

>100_bases
TTCAAAGAAAAAAGGAGTGCCAATATGCACTCCTTTTTTCTTTCTGAGTTATAAAATGGAAGTATAAAAAAACGCAGCTG
TTACGCTGCGTTTTTTAGAA

Product: small heat-shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MLNDQEVLSMSSVSLSPLFRRSIGFDRLNDLFDYAMQSETPNYPPYNIEKDGENNYRILIASAGFDQDELRIHLENQVLT
ISGQPDSEQVDKNIEYLHKGIARRAFKLSLRLDEHIEVQQADYENGLLKIELQRIIPEEKMPRQIPIGQSKSIKNIESSK
IVNS

Sequences:

>Translated_164_residues
MLNDQEVLSMSSVSLSPLFRRSIGFDRLNDLFDYAMQSETPNYPPYNIEKDGENNYRILIASAGFDQDELRIHLENQVLT
ISGQPDSEQVDKNIEYLHKGIARRAFKLSLRLDEHIEVQQADYENGLLKIELQRIIPEEKMPRQIPIGQSKSIKNIESSK
IVNS
>Mature_164_residues
MLNDQEVLSMSSVSLSPLFRRSIGFDRLNDLFDYAMQSETPNYPPYNIEKDGENNYRILIASAGFDQDELRIHLENQVLT
ISGQPDSEQVDKNIEYLHKGIARRAFKLSLRLDEHIEVQQADYENGLLKIELQRIIPEEKMPRQIPIGQSKSIKNIESSK
IVNS

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

Organism=Escherichia coli, GI1790122, Length=138, Percent_Identity=44.9275362318841, Blast_Score=117, Evalue=5e-28,
Organism=Escherichia coli, GI87082316, Length=144, Percent_Identity=40.9722222222222, Blast_Score=109, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 18893; Mature: 18893

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNDQEVLSMSSVSLSPLFRRSIGFDRLNDLFDYAMQSETPNYPPYNIEKDGENNYRILI
CCCCHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE
ASAGFDQDELRIHLENQVLTISGQPDSEQVDKNIEYLHKGIARRAFKLSLRLDEHIEVQQ
EECCCCCCCEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEC
ADYENGLLKIELQRIIPEEKMPRQIPIGQSKSIKNIESSKIVNS
CCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MLNDQEVLSMSSVSLSPLFRRSIGFDRLNDLFDYAMQSETPNYPPYNIEKDGENNYRILI
CCCCHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE
ASAGFDQDELRIHLENQVLTISGQPDSEQVDKNIEYLHKGIARRAFKLSLRLDEHIEVQQ
EECCCCCCCEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEC
ADYENGLLKIELQRIIPEEKMPRQIPIGQSKSIKNIESSKIVNS
CCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9108283 [H]