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The map label for this gene is putR [H]

Identifier: 50086000

GI number: 50086000

Start: 2908333

End: 2908785

Strand: Reverse

Name: putR [H]

Synonym: ACIAD2979

Alternate gene names: 50086000

Gene position: 2908785-2908333 (Counterclockwise)

Preceding gene: 50086002

Following gene: 50085999

Centisome position: 80.83

GC content: 46.36

Gene sequence:

>453_bases
ATGGATAAGATAGATAAGAAGATTCTTGCGGAACTTCAGCAAAATGGACGATTATCTTTGACTGAGCTGGCTGAAAAAAT
TGGTTTGAGCTTGTCGCCGTGCCATCGTCGTGTACGTGCACTCGAAGAATCGGGTGTGATTCGGGGGTACCGTGCCCAGC
TTGAACCTGCACTGATTGGATTACAATTTGCGACCATTGTGTTTGTCACGCTACGCGATGGTGACAAAGCCTCGGTGAGC
GCATTTGAAGAAGCGGTGATCGAGATTCCACAAATTGTGCAGGCGCAGCGCCTCTTTGGTGATCCCGATTATATGCTGCA
TGTGGTGACTAAGGATTTGCTGAGTTTTCAAAAACTCTACGATGAGCGCCTTTCAGCTATGCCGAATGTACAGCGTTTAA
TTTCGACCATGGTCATGAAAAATGTGGTTACCGATCGTTTGTATCCTATTTAG

Upstream 100 bases:

>100_bases
ATAAGAGCGTAACGGTATGTAGAAAAGCATAGCCAGAACAGATTAGAATGTGCTGTTAAAGACTTGCTCAAAAAATGATA
AAAAGGAGAGTTTCTTCTAT

Downstream 100 bases:

>100_bases
TCAGGTTATATGGTCTTCATTTGAGTCGATCGATGAATTCGCATTGATAGCTACCAAAAAACGATGTGTAATCTGCTTTA
AAAAGAGAAATATCAAAGCG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MDKIDKKILAELQQNGRLSLTELAEKIGLSLSPCHRRVRALEESGVIRGYRAQLEPALIGLQFATIVFVTLRDGDKASVS
AFEEAVIEIPQIVQAQRLFGDPDYMLHVVTKDLLSFQKLYDERLSAMPNVQRLISTMVMKNVVTDRLYPI

Sequences:

>Translated_150_residues
MDKIDKKILAELQQNGRLSLTELAEKIGLSLSPCHRRVRALEESGVIRGYRAQLEPALIGLQFATIVFVTLRDGDKASVS
AFEEAVIEIPQIVQAQRLFGDPDYMLHVVTKDLLSFQKLYDERLSAMPNVQRLISTMVMKNVVTDRLYPI
>Mature_150_residues
MDKIDKKILAELQQNGRLSLTELAEKIGLSLSPCHRRVRALEESGVIRGYRAQLEPALIGLQFATIVFVTLRDGDKASVS
AFEEAVIEIPQIVQAQRLFGDPDYMLHVVTKDLLSFQKLYDERLSAMPNVQRLISTMVMKNVVTDRLYPI

Specific function: Transcriptional activator of the putA gene in response to proline [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=142, Percent_Identity=37.3239436619718, Blast_Score=98, Evalue=2e-22,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=31.3333333333333, Blast_Score=95, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 16957; Mature: 16957

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKIDKKILAELQQNGRLSLTELAEKIGLSLSPCHRRVRALEESGVIRGYRAQLEPALIG
CCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LQFATIVFVTLRDGDKASVSAFEEAVIEIPQIVQAQRLFGDPDYMLHVVTKDLLSFQKLY
HHHHHHHEEHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
DERLSAMPNVQRLISTMVMKNVVTDRLYPI
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDKIDKKILAELQQNGRLSLTELAEKIGLSLSPCHRRVRALEESGVIRGYRAQLEPALIG
CCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LQFATIVFVTLRDGDKASVSAFEEAVIEIPQIVQAQRLFGDPDYMLHVVTKDLLSFQKLY
HHHHHHHEEHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
DERLSAMPNVQRLISTMVMKNVVTDRLYPI
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592417 [H]