Click here to switch to the map view.

The map label for this gene is 50085976

Identifier: 50085976

GI number: 50085976

Start: 2879847

End: 2880524

Strand: Reverse

Name: 50085976

Synonym: ACIAD2949

Alternate gene names: NA

Gene position: 2880524-2879847 (Counterclockwise)

Preceding gene: 50085978

Following gene: 50085975

Centisome position: 80.05

GC content: 37.76

Gene sequence:

>678_bases
GTGAGCTATGCCGTATTTTTAAAAATTGAGCAAACCACGCATGCACGTTTTGAGCAGATTCGTAATCAATTGATTACAGG
TACATCAGAGTCACAATCCAAACAGTTAGGCATTGTACTCTCAGATATTGCCTGTCAAATTATTGAACAGGTTTTTACTG
AGCTTTTAATGCAGCAAAAACAGAGTAACACTCAAATTCAATCCATTGCAGATGATTCTGAAAAAGTCATTCAACAGGTA
TTGGCAGCCTTAAAAAAATACTTACCATGGTCGGTTTCTTTTTTTAGTAATGAACGGCTTGTACCGATGGTGAATTACCT
TGCAAGTTTGGTTCGTCATCAAAATCAAGATTTATTTATTCGATATTTTATCGATCCTTTATTGGTGCAGGATACGCTGA
GTTACGTTGATAAAGTTCGTGAAGGGCAGATCAGCTATGTGCCAAAAGCATTTCATGCTTTAACCAAGATTGTGGATCAG
GGCGTGACTTGCCTGATTCGTGAACCCAAACATTTATTAAAATTTAATCTGGTGGTCGATAAAACTTTAAATGGCGTGAT
TCATATGACCACACATCTGGGCTACAAGCGCCTAGAGAAGCTGGGCACGCAAATTGACCTTGATATGGCAAATGACTATA
TTGAACATTTTCTGGCATTTCTAAGAAAAGAAGCCTAA

Upstream 100 bases:

>100_bases
AAAAATTTACCTGATCTTAAAAACGCGCTAGATTAAATTTTCATGCAGCACACGGCATTTAAAATGCATTCTGGATTAAA
ACAATAGTGAGGGGAAAATC

Downstream 100 bases:

>100_bases
TTCTTTCATTTAAAAGGTAAATCACCATGTCAAAACTTAATTCACTTGAGAATAAAGTGGTCTGGATTACGGGGGCTTCT
TCTGGTTTAGGGAAAGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSYAVFLKIEQTTHARFEQIRNQLITGTSESQSKQLGIVLSDIACQIIEQVFTELLMQQKQSNTQIQSIADDSEKVIQQV
LAALKKYLPWSVSFFSNERLVPMVNYLASLVRHQNQDLFIRYFIDPLLVQDTLSYVDKVREGQISYVPKAFHALTKIVDQ
GVTCLIREPKHLLKFNLVVDKTLNGVIHMTTHLGYKRLEKLGTQIDLDMANDYIEHFLAFLRKEA

Sequences:

>Translated_225_residues
MSYAVFLKIEQTTHARFEQIRNQLITGTSESQSKQLGIVLSDIACQIIEQVFTELLMQQKQSNTQIQSIADDSEKVIQQV
LAALKKYLPWSVSFFSNERLVPMVNYLASLVRHQNQDLFIRYFIDPLLVQDTLSYVDKVREGQISYVPKAFHALTKIVDQ
GVTCLIREPKHLLKFNLVVDKTLNGVIHMTTHLGYKRLEKLGTQIDLDMANDYIEHFLAFLRKEA
>Mature_224_residues
SYAVFLKIEQTTHARFEQIRNQLITGTSESQSKQLGIVLSDIACQIIEQVFTELLMQQKQSNTQIQSIADDSEKVIQQVL
AALKKYLPWSVSFFSNERLVPMVNYLASLVRHQNQDLFIRYFIDPLLVQDTLSYVDKVREGQISYVPKAFHALTKIVDQG
VTCLIREPKHLLKFNLVVDKTLNGVIHMTTHLGYKRLEKLGTQIDLDMANDYIEHFLAFLRKEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25946; Mature: 25815

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYAVFLKIEQTTHARFEQIRNQLITGTSESQSKQLGIVLSDIACQIIEQVFTELLMQQK
CCEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSNTQIQSIADDSEKVIQQVLAALKKYLPWSVSFFSNERLVPMVNYLASLVRHQNQDLFI
HCCCHHHHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEH
RYFIDPLLVQDTLSYVDKVREGQISYVPKAFHALTKIVDQGVTCLIREPKHLLKFNLVVD
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEHHCCHHHHHHHHHHH
KTLNGVIHMTTHLGYKRLEKLGTQIDLDMANDYIEHFLAFLRKEA
HHHCCHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SYAVFLKIEQTTHARFEQIRNQLITGTSESQSKQLGIVLSDIACQIIEQVFTELLMQQK
CEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSNTQIQSIADDSEKVIQQVLAALKKYLPWSVSFFSNERLVPMVNYLASLVRHQNQDLFI
HCCCHHHHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEH
RYFIDPLLVQDTLSYVDKVREGQISYVPKAFHALTKIVDQGVTCLIREPKHLLKFNLVVD
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEHHCCHHHHHHHHHHH
KTLNGVIHMTTHLGYKRLEKLGTQIDLDMANDYIEHFLAFLRKEA
HHHCCHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA