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The map label for this gene is ybaZ [H]

Identifier: 50085904

GI number: 50085904

Start: 2799971

End: 2800372

Strand: Reverse

Name: ybaZ [H]

Synonym: ACIAD2864

Alternate gene names: 50085904

Gene position: 2800372-2799971 (Counterclockwise)

Preceding gene: 50085906

Following gene: 50085899

Centisome position: 77.82

GC content: 34.83

Gene sequence:

>402_bases
CTGAGATTCAAATTTCTGAGAGGGAAGCTCAATCATCCTATAAAATGTGTATGTGATAATCTGTCTATGGATAATCAAAT
CATGTCAACAGAGCTTTATTCGCAAATCCTTGAAGTAATTGCGCTAGTTCCTTTTGGAAAGGTGGCAACTTATGGACAAA
TTGCTCGACTTGCAGGTTTACCTAAGCATGCAAGATTGGTTGGTTACACTTTAAAAAATATAGATCAAGCTAGTGATATT
CCTTGGCATCGGATTATTAATGCTCAAGGAAAAGTCAGTACATATCATCTCAATCAAATAGGGGAGAACATCCAACTCAA
TAAATTGAGGGATGAAGGGATTGTTGTTCTAAATGGAAAAATTAATCTAAAAAAATACCAATGGTTAGTCTCACAAAGTT
AA

Upstream 100 bases:

>100_bases
TTTTAATGTGAATCTTAAAACTATAGCTTTTCTCAAATGAGAAAAAACGGATAGTCATATTTAAAGTAACATAGAACGTT
TAAGAAAATAAGTTTCAATA

Downstream 100 bases:

>100_bases
AAATCATGGATGAGTAGCACATTATTGCTTGTCGGGAGATTGAGCTTTAACAATGAGAACTGGCTTCAAACTTTCATTTA
AAACTTTTTGGGTGACGCTT

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MRFKFLRGKLNHPIKCVCDNLSMDNQIMSTELYSQILEVIALVPFGKVATYGQIARLAGLPKHARLVGYTLKNIDQASDI
PWHRIINAQGKVSTYHLNQIGENIQLNKLRDEGIVVLNGKINLKKYQWLVSQS

Sequences:

>Translated_133_residues
MRFKFLRGKLNHPIKCVCDNLSMDNQIMSTELYSQILEVIALVPFGKVATYGQIARLAGLPKHARLVGYTLKNIDQASDI
PWHRIINAQGKVSTYHLNQIGENIQLNKLRDEGIVVLNGKINLKKYQWLVSQS
>Mature_133_residues
MRFKFLRGKLNHPIKCVCDNLSMDNQIMSTELYSQILEVIALVPFGKVATYGQIARLAGLPKHARLVGYTLKNIDQASDI
PWHRIINAQGKVSTYHLNQIGENIQLNKLRDEGIVVLNGKINLKKYQWLVSQS

Specific function: Unknown

COG id: COG3695

COG function: function code L; Predicted methylated DNA-protein cysteine methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MGMT family [H]

Homologues:

Organism=Escherichia coli, GI1786659, Length=115, Percent_Identity=33.9130434782609, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014048
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01035 DNA_binding_1 [H]

EC number: NA

Molecular weight: Translated: 15117; Mature: 15117

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFKFLRGKLNHPIKCVCDNLSMDNQIMSTELYSQILEVIALVPFGKVATYGQIARLAGL
CCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
PKHARLVGYTLKNIDQASDIPWHRIINAQGKVSTYHLNQIGENIQLNKLRDEGIVVLNGK
CCHHHHHHHHHHCCCCCCCCCHHHEECCCCCEEEEEHHHCCCCCEEEEECCCCEEEECCC
INLKKYQWLVSQS
CCCEEEEEEECCC
>Mature Secondary Structure
MRFKFLRGKLNHPIKCVCDNLSMDNQIMSTELYSQILEVIALVPFGKVATYGQIARLAGL
CCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
PKHARLVGYTLKNIDQASDIPWHRIINAQGKVSTYHLNQIGENIQLNKLRDEGIVVLNGK
CCHHHHHHHHHHCCCCCCCCCHHHEECCCCCEEEEEHHHCCCCCEEEEECCCCEEEECCC
INLKKYQWLVSQS
CCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]