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The map label for this gene is yidL [C]

Identifier: 50085833

GI number: 50085833

Start: 2724769

End: 2725713

Strand: Reverse

Name: yidL [C]

Synonym: ACIAD2778

Alternate gene names: 50085833

Gene position: 2725713-2724769 (Counterclockwise)

Preceding gene: 50085834

Following gene: 50085832

Centisome position: 75.74

GC content: 32.38

Gene sequence:

>945_bases
GTGAGCGGAGCTTTTAAAATGTCTATTTATATTGATTCTCATAAGGTCGTATTGAAACAAGTGGGCGATATATTTTTAGA
CTCATGTTCTCCCTTACCCAACCATCATTTGAATCATTTCAATCCGTCTGATGGAAATGGCTATAGTGAAATTTATGATT
TTGGTAAATTGTGCGTAGGTAAAGGAAAATATTGGATAGATCATCCACTTCAGATGAGTGCTGAGACACCAGCTCATTCC
TTTGGGATCACGATACTCCTTTCTGGAACACATCACATTCAAAATCATAAAAGTAATCATAAATATGAAATTCGTTCCCC
TATGATTATTTTACGAAAAGGAAGTTTAGGCTTACAAACAATTCACCTTCAAGAGCATAAAGAAATGTCTCTAATTTCTT
TAGATTTTAATCAAAGTTTCCTTGAAATTATGGAAAGTAATTCTCTAAATTCTGATTTCGCAAATTTCTTTTTAAGTGAA
CCAAGTACAGCATTAAAAACGATCAATATTCCTAATAAGAATGTATTACATCAAGCCCACTATTTACTCAATATTCCATC
AGCTCAGTCATCAATTGATCTTCTTCACTTGGAGGGGGCAGCACTAGAGTTAATGAGTCTATTGCTAGGTAACAATCAAA
AATCTAACGAAATACCTTCATCAGTTCAAAGAACGATCTTTATTTTAGAAAATGAATTTGAAAAAAAGATCACAATTCGC
ACTCTGGCTAAACAAGTCGGGATTAATGAGTGTGATTTAAAAAAAATATTTAAGGAATATACGGGCAAAACTATTGGACA
CTATTTATTAGAAAATCGAATGAGATGTGCTCAAATTTTGCTCAAAGAGGGTGTTTCAATTGAAAAAGTTGCCAATCAAA
TTGGATACAGTAGTACTCAGTATTTTAAAAAAATTTATGAACGTTATTTCAGCTACAGTTGTTAG

Upstream 100 bases:

>100_bases
GGTTTACTTGATATTATTTCGATGTAAATTCACTATTTCTTACGTATTTTACCATTGACAATTATAATATATGAAATGAA
AATAATTATCATTAACATTT

Downstream 100 bases:

>100_bases
CAATGTATGTTGAAATTATACGCTAATTTCATTCGATGGATTTTAGGCAGCCAATTTTTATGCAGAACATTTTTATAAAA
TCCAGTACCATTGATGATTG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Regulatory Protein

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MSGAFKMSIYIDSHKVVLKQVGDIFLDSCSPLPNHHLNHFNPSDGNGYSEIYDFGKLCVGKGKYWIDHPLQMSAETPAHS
FGITILLSGTHHIQNHKSNHKYEIRSPMIILRKGSLGLQTIHLQEHKEMSLISLDFNQSFLEIMESNSLNSDFANFFLSE
PSTALKTINIPNKNVLHQAHYLLNIPSAQSSIDLLHLEGAALELMSLLLGNNQKSNEIPSSVQRTIFILENEFEKKITIR
TLAKQVGINECDLKKIFKEYTGKTIGHYLLENRMRCAQILLKEGVSIEKVANQIGYSSTQYFKKIYERYFSYSC

Sequences:

>Translated_314_residues
MSGAFKMSIYIDSHKVVLKQVGDIFLDSCSPLPNHHLNHFNPSDGNGYSEIYDFGKLCVGKGKYWIDHPLQMSAETPAHS
FGITILLSGTHHIQNHKSNHKYEIRSPMIILRKGSLGLQTIHLQEHKEMSLISLDFNQSFLEIMESNSLNSDFANFFLSE
PSTALKTINIPNKNVLHQAHYLLNIPSAQSSIDLLHLEGAALELMSLLLGNNQKSNEIPSSVQRTIFILENEFEKKITIR
TLAKQVGINECDLKKIFKEYTGKTIGHYLLENRMRCAQILLKEGVSIEKVANQIGYSSTQYFKKIYERYFSYSC
>Mature_313_residues
SGAFKMSIYIDSHKVVLKQVGDIFLDSCSPLPNHHLNHFNPSDGNGYSEIYDFGKLCVGKGKYWIDHPLQMSAETPAHSF
GITILLSGTHHIQNHKSNHKYEIRSPMIILRKGSLGLQTIHLQEHKEMSLISLDFNQSFLEIMESNSLNSDFANFFLSEP
STALKTINIPNKNVLHQAHYLLNIPSAQSSIDLLHLEGAALELMSLLLGNNQKSNEIPSSVQRTIFILENEFEKKITIRT
LAKQVGINECDLKKIFKEYTGKTIGHYLLENRMRCAQILLKEGVSIEKVANQIGYSSTQYFKKIYERYFSYSC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35684; Mature: 35553

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGAFKMSIYIDSHKVVLKQVGDIFLDSCSPLPNHHLNHFNPSDGNGYSEIYDFGKLCVG
CCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
KGKYWIDHPLQMSAETPAHSFGITILLSGTHHIQNHKSNHKYEIRSPMIILRKGSLGLQT
CCCEEECCCCCCCCCCCCCCCCEEEEEECCHHHHCCCCCCCEEECCCEEEEEECCCCEEE
IHLQEHKEMSLISLDFNQSFLEIMESNSLNSDFANFFLSEPSTALKTINIPNKNVLHQAH
EEECCCCCCEEEEECCCHHHHHHHHCCCCCCHHHHHHHCCCCHHEEEECCCCHHHHHHHH
YLLNIPSAQSSIDLLHLEGAALELMSLLLGNNQKSNEIPSSVQRTIFILENEFEKKITIR
HEEECCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHEEEEEECCCHHHHHHH
TLAKQVGINECDLKKIFKEYTGKTIGHYLLENRMRCAQILLKEGVSIEKVANQIGYSSTQ
HHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHH
YFKKIYERYFSYSC
HHHHHHHHHHCCCC
>Mature Secondary Structure 
SGAFKMSIYIDSHKVVLKQVGDIFLDSCSPLPNHHLNHFNPSDGNGYSEIYDFGKLCVG
CCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
KGKYWIDHPLQMSAETPAHSFGITILLSGTHHIQNHKSNHKYEIRSPMIILRKGSLGLQT
CCCEEECCCCCCCCCCCCCCCCEEEEEECCHHHHCCCCCCCEEECCCEEEEEECCCCEEE
IHLQEHKEMSLISLDFNQSFLEIMESNSLNSDFANFFLSEPSTALKTINIPNKNVLHQAH
EEECCCCCCEEEEECCCHHHHHHHHCCCCCCHHHHHHHCCCCHHEEEECCCCHHHHHHHH
YLLNIPSAQSSIDLLHLEGAALELMSLLLGNNQKSNEIPSSVQRTIFILENEFEKKITIR
HEEECCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHEEEEEECCCHHHHHHH
TLAKQVGINECDLKKIFKEYTGKTIGHYLLENRMRCAQILLKEGVSIEKVANQIGYSSTQ
HHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHH
YFKKIYERYFSYSC
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA