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The map label for this gene is pqiA-1 [H]

Identifier: 50085796

GI number: 50085796

Start: 2679182

End: 2679877

Strand: Reverse

Name: pqiA-1 [H]

Synonym: ACIAD2737

Alternate gene names: 50085796

Gene position: 2679877-2679182 (Counterclockwise)

Preceding gene: 50085797

Following gene: 50085795

Centisome position: 74.47

GC content: 41.95

Gene sequence:

>696_bases
ATGGAAATTTGCTCCATGAGTCAACCTTCCTCAGATCAATCCGTCGCATCTTTTGAATCGAAGTCTCTCAACATTTTAGG
AGAACATATTCCTGTATCTGAATTGGCAGGTTGTGAAGAATGCGATACGGTTTATCGCAAAGTTAAACTTGCAGCAGGTG
AGCGTGCCTATTGTGTGTGCTGTGGCGCCGAACTGTATCGAAAAACCAGATCTCTCACCTCATTGCTGGCTCTGGTTGTC
ACTGCACTCATTATTTTTGCAATTGCCAATAGTTTCCCTATTGTTAAGGTCGAATTACAGGGCAATACCTCTCAAACTAC
ATTGCTTGGTGCAGCTTGGACCATGTTTCAAATTGATCGGGCATTAGTAGGCATATTAATTCTATTTACTACGTTCATTG
TTCCATTACTTGATTTATTGCTCCTCACTTATATTTTGTCTTCTGTTGGAATTTTTAAGCAGCGCCCTCCCTATCTAAGA
TTGGCACTCAGAATACTGTTCCTGTTTCGGGTATGGGGCATGGTTGAAGTCTTTCTCATTGGGGTTTTAGTGACTTTAGT
GAAATTGGTGGGCATGGTGGTGGTGATTCCAGGTGTAGCACTTTGGGCCTTTGCAATCTTAAGTTTACTGTTGGTTTATA
TCGCATCGGTCAAAATCAAGGATATTTGGGATGAAGTAGACAGGTGTGTGCCATGA

Upstream 100 bases:

>100_bases
ACTGCATCATCATCGGTTAAGATGATTGGCATAAGAAATATAAATTTGTATATTGACAGATCCAGCAGCAAATTTAATTT
CGATTTCAAATAAACAATAA

Downstream 100 bases:

>100_bases
GTCAAGAGCATCAAAATCCTACGCCGTTACCACAAGTTTCCGATATGGCTCCAGTGAATCCACCCAAAAACCAGCGCTAT
CCAAGAGCGGTAGATTTGTC

Product: paraquat-inducible protein A (part 1)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MEICSMSQPSSDQSVASFESKSLNILGEHIPVSELAGCEECDTVYRKVKLAAGERAYCVCCGAELYRKTRSLTSLLALVV
TALIIFAIANSFPIVKVELQGNTSQTTLLGAAWTMFQIDRALVGILILFTTFIVPLLDLLLLTYILSSVGIFKQRPPYLR
LALRILFLFRVWGMVEVFLIGVLVTLVKLVGMVVVIPGVALWAFAILSLLLVYIASVKIKDIWDEVDRCVP

Sequences:

>Translated_231_residues
MEICSMSQPSSDQSVASFESKSLNILGEHIPVSELAGCEECDTVYRKVKLAAGERAYCVCCGAELYRKTRSLTSLLALVV
TALIIFAIANSFPIVKVELQGNTSQTTLLGAAWTMFQIDRALVGILILFTTFIVPLLDLLLLTYILSSVGIFKQRPPYLR
LALRILFLFRVWGMVEVFLIGVLVTLVKLVGMVVVIPGVALWAFAILSLLLVYIASVKIKDIWDEVDRCVP
>Mature_231_residues
MEICSMSQPSSDQSVASFESKSLNILGEHIPVSELAGCEECDTVYRKVKLAAGERAYCVCCGAELYRKTRSLTSLLALVV
TALIIFAIANSFPIVKVELQGNTSQTTLLGAAWTMFQIDRALVGILILFTTFIVPLLDLLLLTYILSSVGIFKQRPPYLR
LALRILFLFRVWGMVEVFLIGVLVTLVKLVGMVVVIPGVALWAFAILSLLLVYIASVKIKDIWDEVDRCVP

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1788137, Length=209, Percent_Identity=24.4019138755981, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1787183, Length=204, Percent_Identity=28.4313725490196, Blast_Score=71, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR011031
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 25490; Mature: 25490

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEICSMSQPSSDQSVASFESKSLNILGEHIPVSELAGCEECDTVYRKVKLAAGERAYCVC
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEE
CGAELYRKTRSLTSLLALVVTALIIFAIANSFPIVKVELQGNTSQTTLLGAAWTMFQIDR
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
ALVGILILFTTFIVPLLDLLLLTYILSSVGIFKQRPPYLRLALRILFLFRVWGMVEVFLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GVLVTLVKLVGMVVVIPGVALWAFAILSLLLVYIASVKIKDIWDEVDRCVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEICSMSQPSSDQSVASFESKSLNILGEHIPVSELAGCEECDTVYRKVKLAAGERAYCVC
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEE
CGAELYRKTRSLTSLLALVVTALIIFAIANSFPIVKVELQGNTSQTTLLGAAWTMFQIDR
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
ALVGILILFTTFIVPLLDLLLLTYILSSVGIFKQRPPYLRLALRILFLFRVWGMVEVFLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GVLVTLVKLVGMVVVIPGVALWAFAILSLLLVYIASVKIKDIWDEVDRCVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]