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The map label for this gene is umuD [H]

Identifier: 50085790

GI number: 50085790

Start: 2673896

End: 2674522

Strand: Reverse

Name: umuD [H]

Synonym: ACIAD2729

Alternate gene names: 50085790

Gene position: 2674522-2673896 (Counterclockwise)

Preceding gene: 50085792

Following gene: 50085789

Centisome position: 74.32

GC content: 41.79

Gene sequence:

>627_bases
GTGTTAGGAGGGCTGATGTCACAACAAAATAAAAATGAGCATGGTGGTGCCCGCACCAATGCTGGACGTAAGGCCAAATA
CCAAGAGCCAACTAAAGTCATTCGAGTGCCAGAATCTCAGGTTGCTTTTATTAAGCGTTGGCTTTTAGATAACGTGAAAA
CCGACAATCTTATTGATTTTAATTCGGCACTGAAAGTCCAGGCGATACAGCCCAATCCAACAAAGATCTACCAGATTCCG
TTAGCAACAGAACGTGTTGCTGCTGGTTTGCCATCACCTGCACAGGAGCATGTCGAGCAGAGTCTGGATCTGAATGAATA
TTTGGTTCGTAATGAAAATGCGACGTTTATTGTAAAGGCCAATTCGTTATCTATGCTGGATGCAGGCATTGATATTGATG
ATCCATTGATTGTAGATCGAAGTATTACGGCCAAAGCAGGTGATATCGTGATTGCGATGGTTGACAATGAGTTTACGGTA
AAACGTCTGATGATCGATCATCATTTTCATCCGCCTAAAGTCTGGTTAAAAGCAGAAAATCCTGATTTTCAGAATATTTA
TATCGATGAAGGTCAAGAACTCGTGATCTGGGGTGTAGTAACTTACAATCTGAAACCTATGCGTTAG

Upstream 100 bases:

>100_bases
AATTTGATCTGATGAGGATCATTGTTATGCAAAAATTATCGTGCGTCAACTTGAATTTGTAACGATTTCAAGTTAGATTA
TTTTAACTTGAGAAAACATT

Downstream 100 bases:

>100_bases
TCATGAGTCAGAGAATCTTTGCGCTCATTGACATTAACAATGCCTATGTCAGTTGTGAGCGCATTTTTGAGCCAAAATTA
AACGGACGCCCTGTGATTGT

Product: component of DNA polymerase V

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MLGGLMSQQNKNEHGGARTNAGRKAKYQEPTKVIRVPESQVAFIKRWLLDNVKTDNLIDFNSALKVQAIQPNPTKIYQIP
LATERVAAGLPSPAQEHVEQSLDLNEYLVRNENATFIVKANSLSMLDAGIDIDDPLIVDRSITAKAGDIVIAMVDNEFTV
KRLMIDHHFHPPKVWLKAENPDFQNIYIDEGQELVIWGVVTYNLKPMR

Sequences:

>Translated_208_residues
MLGGLMSQQNKNEHGGARTNAGRKAKYQEPTKVIRVPESQVAFIKRWLLDNVKTDNLIDFNSALKVQAIQPNPTKIYQIP
LATERVAAGLPSPAQEHVEQSLDLNEYLVRNENATFIVKANSLSMLDAGIDIDDPLIVDRSITAKAGDIVIAMVDNEFTV
KRLMIDHHFHPPKVWLKAENPDFQNIYIDEGQELVIWGVVTYNLKPMR
>Mature_208_residues
MLGGLMSQQNKNEHGGARTNAGRKAKYQEPTKVIRVPESQVAFIKRWLLDNVKTDNLIDFNSALKVQAIQPNPTKIYQIP
LATERVAAGLPSPAQEHVEQSLDLNEYLVRNENATFIVKANSLSMLDAGIDIDDPLIVDRSITAKAGDIVIAMVDNEFTV
KRLMIDHHFHPPKVWLKAENPDFQNIYIDEGQELVIWGVVTYNLKPMR

Specific function: Involved in UV protection and mutation [H]

COG id: COG1974

COG function: function code KT; SOS-response transcriptional repressors (RecA-mediated autopeptidases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S24 family [H]

Homologues:

Organism=Escherichia coli, GI1787431, Length=134, Percent_Identity=45.5223880597015, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1790476, Length=115, Percent_Identity=37.3913043478261, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006197
- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056 [H]

Pfam domain/function: PF00717 Peptidase_S24 [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 23427; Mature: 23427

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGGLMSQQNKNEHGGARTNAGRKAKYQEPTKVIRVPESQVAFIKRWLLDNVKTDNLIDF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCEEEC
NSALKVQAIQPNPTKIYQIPLATERVAAGLPSPAQEHVEQSLDLNEYLVRNENATFIVKA
CCCEEEEEECCCCCEEEEECCCHHHHHCCCCCHHHHHHHHHCCCCHHEEECCCCEEEEEE
NSLSMLDAGIDIDDPLIVDRSITAKAGDIVIAMVDNEFTVKRLMIDHHFHPPKVWLKAEN
CCEEEEECCCCCCCCEEECCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCEEEEEECC
PDFQNIYIDEGQELVIWGVVTYNLKPMR
CCCCEEEECCCCEEEEEEEEEEEEEECC
>Mature Secondary Structure
MLGGLMSQQNKNEHGGARTNAGRKAKYQEPTKVIRVPESQVAFIKRWLLDNVKTDNLIDF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCEEEC
NSALKVQAIQPNPTKIYQIPLATERVAAGLPSPAQEHVEQSLDLNEYLVRNENATFIVKA
CCCEEEEEECCCCCEEEEECCCHHHHHCCCCCHHHHHHHHHCCCCHHEEECCCCEEEEEE
NSLSMLDAGIDIDDPLIVDRSITAKAGDIVIAMVDNEFTVKRLMIDHHFHPPKVWLKAEN
CCEEEEECCCCCCCCEEECCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCEEEEEECC
PDFQNIYIDEGQELVIWGVVTYNLKPMR
CCCCEEEECCCCEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2989816 [H]