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The map label for this gene is ycaC [H]

Identifier: 50085785

GI number: 50085785

Start: 2669836

End: 2670441

Strand: Reverse

Name: ycaC [H]

Synonym: ACIAD2723

Alternate gene names: 50085785

Gene position: 2670441-2669836 (Counterclockwise)

Preceding gene: 50085786

Following gene: 50085784

Centisome position: 74.21

GC content: 42.41

Gene sequence:

>606_bases
ATGACTAATCAACGTTTTACTCCTGAAAATTCAGCATTACTCCTTATTGATCACCAAGTTGGTACGATGCAACTGATAAA
AAATATAGACAAGGAACTCGCTGCTAAGCAGTCAATTGCATTGGCTAAAATGGCTAAGATTCTTGGGATACCAGTAGTTA
TTACCTCTAGCCAAGAAGACAATGCGCAAGGACCAATTCTGCCAGAAATCGCAGAAACTTTACCTGAAGCCTATGAAGCT
CGTGTTAAGCGTCTAGGTGTGGTTAATGCTTGGGCGGATCAAGAATTCCATGATGCTGTAGTAGCAACAGGTCGAAAAAA
TCTAATTATGGCGGGTGTTACTACAGATGTATGCCTTATTTTTCCAGCAATAGATGCTGTAGCTGAAGGATTTGCTGTAC
AAGCTGTGATAGATGCTTCTGGCTCACCAAGTGATTTGTCAGAAGAATTTTCTCGTCAGCGTATGCACGATGCGGGCGTT
GTACTCACAGCCACTAATACACTCATGGCAGAAATCGCGCAAGACTGGTCTTCTCCCACGGGGCAACAATTGATTGGTCT
GTTGTTTACAGATGTATTTCCAGCATTAGGTGCTGAAATTGCTTAA

Upstream 100 bases:

>100_bases
TCGGTATATGACATTTAAAGCCCCACAAGGGAGTGCCCATATCGTATTGTTCAGCGGACCTCCATTATATGCTTAATCCA
AATTTAACAAGGAATTTACC

Downstream 100 bases:

>100_bases
ATGTTACTAGAGGGTCAAGGCTATATGTTTCGACAGATAGCCTTAACTAATCTAAACGTGGCTCTCATATCTATCGTTCC
TTCAAATGAACTCTGGGTCA

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MTNQRFTPENSALLLIDHQVGTMQLIKNIDKELAAKQSIALAKMAKILGIPVVITSSQEDNAQGPILPEIAETLPEAYEA
RVKRLGVVNAWADQEFHDAVVATGRKNLIMAGVTTDVCLIFPAIDAVAEGFAVQAVIDASGSPSDLSEEFSRQRMHDAGV
VLTATNTLMAEIAQDWSSPTGQQLIGLLFTDVFPALGAEIA

Sequences:

>Translated_201_residues
MTNQRFTPENSALLLIDHQVGTMQLIKNIDKELAAKQSIALAKMAKILGIPVVITSSQEDNAQGPILPEIAETLPEAYEA
RVKRLGVVNAWADQEFHDAVVATGRKNLIMAGVTTDVCLIFPAIDAVAEGFAVQAVIDASGSPSDLSEEFSRQRMHDAGV
VLTATNTLMAEIAQDWSSPTGQQLIGLLFTDVFPALGAEIA
>Mature_200_residues
TNQRFTPENSALLLIDHQVGTMQLIKNIDKELAAKQSIALAKMAKILGIPVVITSSQEDNAQGPILPEIAETLPEAYEAR
VKRLGVVNAWADQEFHDAVVATGRKNLIMAGVTTDVCLIFPAIDAVAEGFAVQAVIDASGSPSDLSEEFSRQRMHDAGVV
LTATNTLMAEIAQDWSSPTGQQLIGLLFTDVFPALGAEIA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=174, Percent_Identity=36.2068965517241, Blast_Score=132, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 21484; Mature: 21353

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNQRFTPENSALLLIDHQVGTMQLIKNIDKELAAKQSIALAKMAKILGIPVVITSSQED
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
NAQGPILPEIAETLPEAYEARVKRLGVVNAWADQEFHDAVVATGRKNLIMAGVTTDVCLI
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHCCCCCEEEEECHHHHHHH
FPAIDAVAEGFAVQAVIDASGSPSDLSEEFSRQRMHDAGVVLTATNTLMAEIAQDWSSPT
HHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCCC
GQQLIGLLFTDVFPALGAEIA
HHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TNQRFTPENSALLLIDHQVGTMQLIKNIDKELAAKQSIALAKMAKILGIPVVITSSQED
CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
NAQGPILPEIAETLPEAYEARVKRLGVVNAWADQEFHDAVVATGRKNLIMAGVTTDVCLI
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHCCCCCEEEEECHHHHHHH
FPAIDAVAEGFAVQAVIDASGSPSDLSEEFSRQRMHDAGVVLTATNTLMAEIAQDWSSPT
HHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCCC
GQQLIGLLFTDVFPALGAEIA
HHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]