Click here to switch to the map view.

The map label for this gene is perM [C]

Identifier: 50085703

GI number: 50085703

Start: 2586117

End: 2587307

Strand: Reverse

Name: perM [C]

Synonym: ACIAD2633

Alternate gene names: 50085703

Gene position: 2587307-2586117 (Counterclockwise)

Preceding gene: 50085706

Following gene: 50085702

Centisome position: 71.9

GC content: 43.66

Gene sequence:

>1191_bases
ATGCAAGATCGTATGCTTCGTCGCGTCTTCATCCTAGCAGGTATAGCACTTCTACTTTGGGTATTATATTTACTCAAGCC
CGTGGTCATTCCATTTGTTGGTGCTTTCTTAATTGCTTATCTGTTTAGTCCACTGGTAGAAAAACTTTCAAAAATCGGTT
TGCCGCGTTGGCTTTCGATTAGTATCGTATTTATTGGTATTGGTGTTTTACTGACTTGGGCCATGTGGTATGTGGTGCCG
CTAGTATGGCAACAGCTTATGTATGCCCGTGACAGTATTCCAAGTGGTATTCATTGGGTTAATGCGACTTTCTTGCCATG
GGTGTCGCATACCTTCAACGTAGAACGCATGGAAATTGACACCGATCAAATTTCAACTGTAGTCATGGAATACATCCAGA
CCAATTACAGTGCAGATAGTATTCAAACCATGGCGCTACGTTTGGCACAGTCTGGTCTGAACTTTATCCAGATTGGGGGC
ACAATTGTGCTTATTCCGATTATCTCATTCTATTTTTTACTTGATTGGGATCGGATGTTGAACAGTTTACGTCGTTTGAT
TCCTCGGCCTTACGAAGAAAGTACTTTACGTATTGTGTATGAATGTCACAGCGTGCTCGGTGCCTTCGTTAAGGGACAGT
TTCTGGTCATGTTACTATTAGGTATTGTATATGCCGTAGGTCTTCAGTTGATTGGTCTTGAAGTTGGCCTGATTATCGGG
ATGGTGGCGGGACTCGCCAGCATTATTCCTTATCTCGGTTTTGCTGTGGGCATAATCGCTGCCGTCATCGCCACGGTTTT
TCAGTTTGGTGTAGACTGGATGCAGCTCGCCTTGGTGGGTGTGGTGTTTATGATTGGACAGGCTGTCGAAGGCTATATTC
TTCAGCCATTTTTGCTTGGTGATAAAATTGGTTTGTCTCCTGTAGCGGTGGTTTTTGCAGTTTTAGCAGGCGCACAGCTT
GCTGGATTCCTTGGAATGTTGATTGCATTGCCTGTTGCTGCAGTGATTGTCGTGTTACTTCGACATTTAAGGGAAGCTTA
CGAACATACACAGATGTATGCAGGAACAGCGACGGTGGTTTCGACTGGCAATGGTGAGCATATCAGTATCGAAACTGAAA
ATCTTGATCTTGATATTGAAGTGAAAAACCCGCAAGATACTGATACGTCGATTGATAATGATCGGAAGTAA

Upstream 100 bases:

>100_bases
TGAATATACGAAACTCTTATGGTATTTATGACCGAAAATGCTATCTTTATTTAAATATTTTTGCATCTATAACGAATACA
TTAGAAAAAGGCTAGAATTT

Downstream 100 bases:

>100_bases
CTCGAAGGTCTATTACATTTATGCGTCAACTACAGTTGGATATTGAACCTCAGCTTGATGCCCGCATTAGCGATTTTTCA
GGGCCAGGCTGGGGACATGT

Product: PerM family permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MQDRMLRRVFILAGIALLLWVLYLLKPVVIPFVGAFLIAYLFSPLVEKLSKIGLPRWLSISIVFIGIGVLLTWAMWYVVP
LVWQQLMYARDSIPSGIHWVNATFLPWVSHTFNVERMEIDTDQISTVVMEYIQTNYSADSIQTMALRLAQSGLNFIQIGG
TIVLIPIISFYFLLDWDRMLNSLRRLIPRPYEESTLRIVYECHSVLGAFVKGQFLVMLLLGIVYAVGLQLIGLEVGLIIG
MVAGLASIIPYLGFAVGIIAAVIATVFQFGVDWMQLALVGVVFMIGQAVEGYILQPFLLGDKIGLSPVAVVFAVLAGAQL
AGFLGMLIALPVAAVIVVLLRHLREAYEHTQMYAGTATVVSTGNGEHISIETENLDLDIEVKNPQDTDTSIDNDRK

Sequences:

>Translated_396_residues
MQDRMLRRVFILAGIALLLWVLYLLKPVVIPFVGAFLIAYLFSPLVEKLSKIGLPRWLSISIVFIGIGVLLTWAMWYVVP
LVWQQLMYARDSIPSGIHWVNATFLPWVSHTFNVERMEIDTDQISTVVMEYIQTNYSADSIQTMALRLAQSGLNFIQIGG
TIVLIPIISFYFLLDWDRMLNSLRRLIPRPYEESTLRIVYECHSVLGAFVKGQFLVMLLLGIVYAVGLQLIGLEVGLIIG
MVAGLASIIPYLGFAVGIIAAVIATVFQFGVDWMQLALVGVVFMIGQAVEGYILQPFLLGDKIGLSPVAVVFAVLAGAQL
AGFLGMLIALPVAAVIVVLLRHLREAYEHTQMYAGTATVVSTGNGEHISIETENLDLDIEVKNPQDTDTSIDNDRK
>Mature_396_residues
MQDRMLRRVFILAGIALLLWVLYLLKPVVIPFVGAFLIAYLFSPLVEKLSKIGLPRWLSISIVFIGIGVLLTWAMWYVVP
LVWQQLMYARDSIPSGIHWVNATFLPWVSHTFNVERMEIDTDQISTVVMEYIQTNYSADSIQTMALRLAQSGLNFIQIGG
TIVLIPIISFYFLLDWDRMLNSLRRLIPRPYEESTLRIVYECHSVLGAFVKGQFLVMLLLGIVYAVGLQLIGLEVGLIIG
MVAGLASIIPYLGFAVGIIAAVIATVFQFGVDWMQLALVGVVFMIGQAVEGYILQPFLLGDKIGLSPVAVVFAVLAGAQL
AGFLGMLIALPVAAVIVVLLRHLREAYEHTQMYAGTATVVSTGNGEHISIETENLDLDIEVKNPQDTDTSIDNDRK

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=339, Percent_Identity=28.6135693215339, Blast_Score=106, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 43874; Mature: 43874

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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ECCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure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ECCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]