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The map label for this gene is yjfH [C]

Identifier: 50085696

GI number: 50085696

Start: 2578714

End: 2579514

Strand: Direct

Name: yjfH [C]

Synonym: ACIAD2626

Alternate gene names: 50085696

Gene position: 2578714-2579514 (Clockwise)

Preceding gene: 50085695

Following gene: 50085697

Centisome position: 71.66

GC content: 39.83

Gene sequence:

>801_bases
CTGGCATCACAGTGGACGCCATTTATGTCAATTATTTATCTTGAATCTAAAGATAACGCCAAAATCAAACACCTTCGCGG
TTTAATCGAACAGCAATCCTTCCGTAAGAAACAGAAACAGACCGTACTTGAAGGCACACATCTATGTTTGTCTTGGTTGC
AAGAACAACGAAAAATCATTTCTTTGTTTACGACCGAAGTTGCCCTTAAACATGCCGACTTTGAAAAAATTATTGACATC
TATCAGGGTGCAATTTTTGTTATTTCTGAAAGTCTTTATCGAGATCTAAGCACTTTAGGTACTACGCTTGCCTGTTTGGC
AGTCATTGATTTACCACAATCAAGCCAAGCCATCGACTTTAAAAAAGATACTCTTATTCTGGAAAATATTCAGGACCCTG
GCAATGTAGGTACGTTGTTACGCTCTGCGGCTGCAGCCAACATTAAACAGGTGGTGTGTACCAAAGGTTCAGCATCTTTA
TGGTCACCACGTGTACTTCGGGCAGGCATGGGTGCTCATTTTAGCTTGTATACTTTTGAAAATATTGAGTTAGATATGAT
TCTGGAACAATTTGATATTCCAGTATTCGTGACAAGTTCACATCATGCAACTAATCTATATGATCAAGATCTCACCAAAC
CTTGTGTATGGATTTTAGGAAATGAAGGACAAGGTGCCTCAGAATATGCTCTCAGTCACGCACAAGCTATAACCATACCG
CAGCCAGGTGGTCAGGAATCATTAAACGTCGCAATTGCAGGTTCAATTTGCTTTTTTGAAATGGTTCGTCAACGACAATA
G

Upstream 100 bases:

>100_bases
GATCTACACCAACGGGTTCCTGTGATTATTGGATCAAAAAATGAAGTCGATCTAGTCACCAGTTACCACTAATAAACCAT
CAAACTGTGATGCCGACTCT

Downstream 100 bases:

>100_bases
AAACGTTAATTTATATTAAAGTCTCTCTTTTATCGAATAAAATCATTTAAACTATCAAAAAATAACTGTTTATGTTGTCA
ACCCATTCTTCATTTTCAGC

Product: tRNA/rRNA methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MASQWTPFMSIIYLESKDNAKIKHLRGLIEQQSFRKKQKQTVLEGTHLCLSWLQEQRKIISLFTTEVALKHADFEKIIDI
YQGAIFVISESLYRDLSTLGTTLACLAVIDLPQSSQAIDFKKDTLILENIQDPGNVGTLLRSAAAANIKQVVCTKGSASL
WSPRVLRAGMGAHFSLYTFENIELDMILEQFDIPVFVTSSHHATNLYDQDLTKPCVWILGNEGQGASEYALSHAQAITIP
QPGGQESLNVAIAGSICFFEMVRQRQ

Sequences:

>Translated_266_residues
MASQWTPFMSIIYLESKDNAKIKHLRGLIEQQSFRKKQKQTVLEGTHLCLSWLQEQRKIISLFTTEVALKHADFEKIIDI
YQGAIFVISESLYRDLSTLGTTLACLAVIDLPQSSQAIDFKKDTLILENIQDPGNVGTLLRSAAAANIKQVVCTKGSASL
WSPRVLRAGMGAHFSLYTFENIELDMILEQFDIPVFVTSSHHATNLYDQDLTKPCVWILGNEGQGASEYALSHAQAITIP
QPGGQESLNVAIAGSICFFEMVRQRQ
>Mature_265_residues
ASQWTPFMSIIYLESKDNAKIKHLRGLIEQQSFRKKQKQTVLEGTHLCLSWLQEQRKIISLFTTEVALKHADFEKIIDIY
QGAIFVISESLYRDLSTLGTTLACLAVIDLPQSSQAIDFKKDTLILENIQDPGNVGTLLRSAAAANIKQVVCTKGSASLW
SPRVLRAGMGAHFSLYTFENIELDMILEQFDIPVFVTSSHHATNLYDQDLTKPCVWILGNEGQGASEYALSHAQAITIPQ
PGGQESLNVAIAGSICFFEMVRQRQ

Specific function: Unknown

COG id: COG0566

COG function: function code J; rRNA methylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Homo sapiens, GI8922534, Length=299, Percent_Identity=27.0903010033445, Blast_Score=94, Evalue=1e-19,
Organism=Escherichia coli, GI1790623, Length=160, Percent_Identity=33.125, Blast_Score=78, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24666840, Length=281, Percent_Identity=24.9110320284698, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001537
- InterPro:   IPR013123 [H]

Pfam domain/function: PF00588 SpoU_methylase; PF08032 SpoU_sub_bind [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 29649; Mature: 29518

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQWTPFMSIIYLESKDNAKIKHLRGLIEQQSFRKKQKQTVLEGTHLCLSWLQEQRKII
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLFTTEVALKHADFEKIIDIYQGAIFVISESLYRDLSTLGTTLACLAVIDLPQSSQAIDF
HHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
KKDTLILENIQDPGNVGTLLRSAAAANIKQVVCTKGSASLWSPRVLRAGMGAHFSLYTFE
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHCCCCEEEEEEEC
NIELDMILEQFDIPVFVTSSHHATNLYDQDLTKPCVWILGNEGQGASEYALSHAQAITIP
CCHHHHHHHHHCCCEEEECCCCCCCCCHHHCCCCEEEEECCCCCCHHHHHHHHCCEEECC
QPGGQESLNVAIAGSICFFEMVRQRQ
CCCCCCCEEEEEEHHHHHHHHHHHCC
>Mature Secondary Structure 
ASQWTPFMSIIYLESKDNAKIKHLRGLIEQQSFRKKQKQTVLEGTHLCLSWLQEQRKII
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLFTTEVALKHADFEKIIDIYQGAIFVISESLYRDLSTLGTTLACLAVIDLPQSSQAIDF
HHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
KKDTLILENIQDPGNVGTLLRSAAAANIKQVVCTKGSASLWSPRVLRAGMGAHFSLYTFE
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHCCCCEEEEEEEC
NIELDMILEQFDIPVFVTSSHHATNLYDQDLTKPCVWILGNEGQGASEYALSHAQAITIP
CCHHHHHHHHHCCCEEEECCCCCCCCCHHHCCCCEEEEECCCCCCHHHHHHHHCCEEECC
QPGGQESLNVAIAGSICFFEMVRQRQ
CCCCCCCEEEEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]