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The map label for this gene is 50085603

Identifier: 50085603

GI number: 50085603

Start: 2481226

End: 2482407

Strand: Reverse

Name: 50085603

Synonym: ACIAD2524

Alternate gene names: NA

Gene position: 2482407-2481226 (Counterclockwise)

Preceding gene: 50085604

Following gene: 50085601

Centisome position: 68.98

GC content: 39.17

Gene sequence:

>1182_bases
ATGGGTGATACAAAGCCAAAATTAAGGATATTAGGTACATCGGTAACACTCATTGAAAAGATTAAATTACGAGCGGAACA
AGATTTAGGGATTCAACTCGAATATATTATTTGTGACCCGCAAACTGCTCAGCAAAGAGCGATTCTATATCCTGATCAAT
ATGATATTTACGATCACTGGTTTCATAGTATTGATCTATTATGGCCCGTTCTTTCGATTCAGCCTATTGAAACTAAGAGA
ATTAAATACTGGAACGAAATTAATGATTTACCTAAAAAGGGAAAATTAATCAAGGAGCAGAAAATTGCATCGGGTGGGGT
GCCCAGCAAACGCTTATATGTGCAGGATAATGGAACATTATCTGATAAAGAAACACAACTGATTAGCATGTTGCCATTAA
CACATAATGTCGATAGTTTTATTTATTCGCCAAAATTATTGCCTTATGGTCTGAATCAGCAACAAGAGAGCTGGTCATGG
TTGCTCAATCCGCATTGGGCTGGAAAGATTGCCATTCAGAATGATGCTGCAATTGGTGTGTTAGATCTCGCGATGGCGTT
ACAAGCGAGTCAGCGTATTGAGTTTGAAGACATTGGTAATCTTACCGTGTCTGAAATTGATCAGATGACCAAAGTATTGA
TGGAATATAAACAATTACAGCATTTTAAACATTTTTGGTCGGATACATCGCAAGTTTATCAATTATTAAGTAGTGGCCAA
ATTAATCTTGCAAGTATTTGGTATACAACGATTATTGAATTGGCGAAGACTCAAAAACTAACGGAATTTAAGGTTGCACG
CCCGGTAGAAGGTTATCGTGCATGGTTTGGTGGGCTGGCACTCTCGCGCAATGTTTCGGGACGAACCAAAGATGTGGCCT
ATGAATATTTGAACTGGTGGCTGGATGGCTGGGCTGGTGCTGTCATGGCACGACAGGGATTGTATATTTCAAATCCTTCA
CGAAGCCGTAATTTTTTGAGACCTGAAGAATGGGATTTCTGGTATATGGGCAAACCTGCGAGTCAGGACCTTTTAGGTGT
TGATGATGAAATTCTGATACCTCAACACCATACACGATTTGGTGGATCATATTTAGAACGAATGGGACACATCGGAGTCT
GGAACTCAATTATGGATGAACATAATTATCTAGTACGTAAGTGGCATGGTTTTGTCAAATAA

Upstream 100 bases:

>100_bases
ATATAAGATTATTATGATGGTTATTTTTGATGGGATAAAAAATCTATTTTCATAAATCCATTCACTTTTTTAAGAATTAC
ATAAAAAGAGGTTTATTTTT

Downstream 100 bases:

>100_bases
AACATCCCGCACATTCTAGGTCAGTCTTTCAAGATAAGGCGCAATATGGGGCTCTGGAATAATTGAAAATACTTTTAAAT
AATCTACGGAGCGTTTCTGA

Product: ABC transporter periplasmic substrate-binding protein

Products: NA

Alternate protein names: Spermidine/Putrescine ABC Transporter; Signal Peptide Prediction; Tat Pathway Signal Sequence Domain Protein; Conserved Protein; Signal Peptide

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MGDTKPKLRILGTSVTLIEKIKLRAEQDLGIQLEYIICDPQTAQQRAILYPDQYDIYDHWFHSIDLLWPVLSIQPIETKR
IKYWNEINDLPKKGKLIKEQKIASGGVPSKRLYVQDNGTLSDKETQLISMLPLTHNVDSFIYSPKLLPYGLNQQQESWSW
LLNPHWAGKIAIQNDAAIGVLDLAMALQASQRIEFEDIGNLTVSEIDQMTKVLMEYKQLQHFKHFWSDTSQVYQLLSSGQ
INLASIWYTTIIELAKTQKLTEFKVARPVEGYRAWFGGLALSRNVSGRTKDVAYEYLNWWLDGWAGAVMARQGLYISNPS
RSRNFLRPEEWDFWYMGKPASQDLLGVDDEILIPQHHTRFGGSYLERMGHIGVWNSIMDEHNYLVRKWHGFVK

Sequences:

>Translated_393_residues
MGDTKPKLRILGTSVTLIEKIKLRAEQDLGIQLEYIICDPQTAQQRAILYPDQYDIYDHWFHSIDLLWPVLSIQPIETKR
IKYWNEINDLPKKGKLIKEQKIASGGVPSKRLYVQDNGTLSDKETQLISMLPLTHNVDSFIYSPKLLPYGLNQQQESWSW
LLNPHWAGKIAIQNDAAIGVLDLAMALQASQRIEFEDIGNLTVSEIDQMTKVLMEYKQLQHFKHFWSDTSQVYQLLSSGQ
INLASIWYTTIIELAKTQKLTEFKVARPVEGYRAWFGGLALSRNVSGRTKDVAYEYLNWWLDGWAGAVMARQGLYISNPS
RSRNFLRPEEWDFWYMGKPASQDLLGVDDEILIPQHHTRFGGSYLERMGHIGVWNSIMDEHNYLVRKWHGFVK
>Mature_392_residues
GDTKPKLRILGTSVTLIEKIKLRAEQDLGIQLEYIICDPQTAQQRAILYPDQYDIYDHWFHSIDLLWPVLSIQPIETKRI
KYWNEINDLPKKGKLIKEQKIASGGVPSKRLYVQDNGTLSDKETQLISMLPLTHNVDSFIYSPKLLPYGLNQQQESWSWL
LNPHWAGKIAIQNDAAIGVLDLAMALQASQRIEFEDIGNLTVSEIDQMTKVLMEYKQLQHFKHFWSDTSQVYQLLSSGQI
NLASIWYTTIIELAKTQKLTEFKVARPVEGYRAWFGGLALSRNVSGRTKDVAYEYLNWWLDGWAGAVMARQGLYISNPSR
SRNFLRPEEWDFWYMGKPASQDLLGVDDEILIPQHHTRFGGSYLERMGHIGVWNSIMDEHNYLVRKWHGFVK

Specific function: Unknown

COG id: COG0687

COG function: function code E; Spermidine/putrescine-binding periplasmic protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45505; Mature: 45373

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDTKPKLRILGTSVTLIEKIKLRAEQDLGIQLEYIICDPQTAQQRAILYPDQYDIYDHW
CCCCCCCEEEEECHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEECCCCCCHHHHH
FHSIDLLWPVLSIQPIETKRIKYWNEINDLPKKGKLIKEQKIASGGVPSKRLYVQDNGTL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCC
SDKETQLISMLPLTHNVDSFIYSPKLLPYGLNQQQESWSWLLNPHWAGKIAIQNDAAIGV
CCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCHHEEECCCCCCEEEEECCCCHHH
LDLAMALQASQRIEFEDIGNLTVSEIDQMTKVLMEYKQLQHFKHFWSDTSQVYQLLSSGQ
HHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
INLASIWYTTIIELAKTQKLTEFKVARPVEGYRAWFGGLALSRNVSGRTKDVAYEYLNWW
EEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH
LDGWAGAVMARQGLYISNPSRSRNFLRPEEWDFWYMGKPASQDLLGVDDEILIPQHHTRF
HHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEECCCCCCCC
GGSYLERMGHIGVWNSIMDEHNYLVRKWHGFVK
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GDTKPKLRILGTSVTLIEKIKLRAEQDLGIQLEYIICDPQTAQQRAILYPDQYDIYDHW
CCCCCCEEEEECHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEECCCCCCHHHHH
FHSIDLLWPVLSIQPIETKRIKYWNEINDLPKKGKLIKEQKIASGGVPSKRLYVQDNGTL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCC
SDKETQLISMLPLTHNVDSFIYSPKLLPYGLNQQQESWSWLLNPHWAGKIAIQNDAAIGV
CCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCHHEEECCCCCCEEEEECCCCHHH
LDLAMALQASQRIEFEDIGNLTVSEIDQMTKVLMEYKQLQHFKHFWSDTSQVYQLLSSGQ
HHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
INLASIWYTTIIELAKTQKLTEFKVARPVEGYRAWFGGLALSRNVSGRTKDVAYEYLNWW
EEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH
LDGWAGAVMARQGLYISNPSRSRNFLRPEEWDFWYMGKPASQDLLGVDDEILIPQHHTRF
HHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEECCCCCCCC
GGSYLERMGHIGVWNSIMDEHNYLVRKWHGFVK
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA