Click here to switch to the map view.

The map label for this gene is tpn32 [H]

Identifier: 50085533

GI number: 50085533

Start: 2413978

End: 2414847

Strand: Direct

Name: tpn32 [H]

Synonym: ACIAD2449

Alternate gene names: 50085533

Gene position: 2413978-2414847 (Clockwise)

Preceding gene: 50085532

Following gene: 50085534

Centisome position: 67.08

GC content: 39.54

Gene sequence:

>870_bases
CTGATGAAAAAAGTATTGAGCGTTGTTTTAACGACAAGTGTGTTGCTTGCTGCTGGTTGTAGTAAAAAAGCGCCTGAACA
GGACACGAAAGCGAGCACAGATCAGACTCACAAAATCGTATTGGCTTCTACAGGTTCCGATACCGATGTATGGAAATATA
TTGCAAGCTTGCCTGAAACCAAACAGGCTGGTATTGATCTTGAAGTCAAAAACTTTACAGATTATGTTGCCATGAACAAG
GCAACTGCAAATAAAGAAGTGGATGTCAATGCATTCCAGTCATATAACTATATGGTGGCTTACAACACAGAAAGTAAAGA
TAAAGTGGCTGCTGTTTCAACCACTTATATCGAACCAATGGGTGTTTATTCTGATAAATACAAAAAAATTGATCAATTTC
CAAATAAAGCAACTATTGCAATTCCAAACGATGCAGCCAATGAAGCTCGTGCATTGTCATTGTTACAAACTGCTGGCTTA
ATTAAATTAAAAGCAGATTTTAATCCAATTCAGGGGACGACCAACGATGTCGTTGAGAATCCTAAGCAGATCCAGCTTAA
AACCATACCAATGGCAACTGCGGTACGCGTAAAAAGCGATGTTGACGCCATTGTATTGGGGAACACGCTTGCGATGGAAG
GTGGACTCAATGTACTCAAAGATGCTGTTTTCTATGAGCCAGTAGATCAATCTACCAAACTGTATGTCAATTTACTTGTG
ACTGCGGCAGGTCGTGAAAACGATGCTACATTGCAAAAACTTGGTTCACTCTATCATACAGAAGCGGTGAAGAAGTTCAT
TGATGAAAAATTTGGTGGTACGAAAATCGACGTAAATAAACCGATTAGCTACCTTACCGAAGCAAAATAG

Upstream 100 bases:

>100_bases
GCGTTGAAAGCTGATTTGGGATGTGTCTAAAATTACACATCATCATGTATTAACAGTATGATACTTGGCTGATATTTAAA
CGCTGTAACTAGGATCTAAC

Downstream 100 bases:

>100_bases
TAATATAATGCTATAAATGAAACAGGCAAGGTCAACTTGCCTGTTTTTTCTTTTATGTATAGTTTCTGACGACATGATTC
AATTTAAAAATATTTCAAAA

Product: lipoprotein

Products: NA

Alternate protein names: 29 kDa protein [H]

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MMKKVLSVVLTTSVLLAAGCSKKAPEQDTKASTDQTHKIVLASTGSDTDVWKYIASLPETKQAGIDLEVKNFTDYVAMNK
ATANKEVDVNAFQSYNYMVAYNTESKDKVAAVSTTYIEPMGVYSDKYKKIDQFPNKATIAIPNDAANEARALSLLQTAGL
IKLKADFNPIQGTTNDVVENPKQIQLKTIPMATAVRVKSDVDAIVLGNTLAMEGGLNVLKDAVFYEPVDQSTKLYVNLLV
TAAGRENDATLQKLGSLYHTEAVKKFIDEKFGGTKIDVNKPISYLTEAK

Sequences:

>Translated_289_residues
MMKKVLSVVLTTSVLLAAGCSKKAPEQDTKASTDQTHKIVLASTGSDTDVWKYIASLPETKQAGIDLEVKNFTDYVAMNK
ATANKEVDVNAFQSYNYMVAYNTESKDKVAAVSTTYIEPMGVYSDKYKKIDQFPNKATIAIPNDAANEARALSLLQTAGL
IKLKADFNPIQGTTNDVVENPKQIQLKTIPMATAVRVKSDVDAIVLGNTLAMEGGLNVLKDAVFYEPVDQSTKLYVNLLV
TAAGRENDATLQKLGSLYHTEAVKKFIDEKFGGTKIDVNKPISYLTEAK
>Mature_289_residues
MMKKVLSVVLTTSVLLAAGCSKKAPEQDTKASTDQTHKIVLASTGSDTDVWKYIASLPETKQAGIDLEVKNFTDYVAMNK
ATANKEVDVNAFQSYNYMVAYNTESKDKVAAVSTTYIEPMGVYSDKYKKIDQFPNKATIAIPNDAANEARALSLLQTAGL
IKLKADFNPIQGTTNDVVENPKQIQLKTIPMATAVRVKSDVDAIVLGNTLAMEGGLNVLKDAVFYEPVDQSTKLYVNLLV
TAAGRENDATLQKLGSLYHTEAVKKFIDEKFGGTKIDVNKPISYLTEAK

Specific function: Unknown

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1790093, Length=249, Percent_Identity=32.1285140562249, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1786396, Length=264, Percent_Identity=32.1969696969697, Blast_Score=111, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 31488; Mature: 31488

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKVLSVVLTTSVLLAAGCSKKAPEQDTKASTDQTHKIVLASTGSDTDVWKYIASLPET
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCC
KQAGIDLEVKNFTDYVAMNKATANKEVDVNAFQSYNYMVAYNTESKDKVAAVSTTYIEPM
HHCCCEEEECCCHHHHHCCCCCCCCCCCCEEECCCCEEEEECCCCCCCEEEEEEEEECCC
GVYSDKYKKIDQFPNKATIAIPNDAANEARALSLLQTAGLIKLKADFNPIQGTTNDVVEN
CCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHCC
PKQIQLKTIPMATAVRVKSDVDAIVLGNTLAMEGGLNVLKDAVFYEPVDQSTKLYVNLLV
CCEEEEEECCCEEEEEECCCCCEEEECCEEEECCCHHHHHHHHHCCCCCCCCEEEEEEEE
TAAGRENDATLQKLGSLYHTEAVKKFIDEKFGGTKIDVNKPISYLTEAK
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHCCC
>Mature Secondary Structure
MMKKVLSVVLTTSVLLAAGCSKKAPEQDTKASTDQTHKIVLASTGSDTDVWKYIASLPET
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCC
KQAGIDLEVKNFTDYVAMNKATANKEVDVNAFQSYNYMVAYNTESKDKVAAVSTTYIEPM
HHCCCEEEECCCHHHHHCCCCCCCCCCCCEEECCCCEEEEECCCCCCCEEEEEEEEECCC
GVYSDKYKKIDQFPNKATIAIPNDAANEARALSLLQTAGLIKLKADFNPIQGTTNDVVEN
CCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHCC
PKQIQLKTIPMATAVRVKSDVDAIVLGNTLAMEGGLNVLKDAVFYEPVDQSTKLYVNLLV
CCEEEEEECCCEEEEEECCCCCEEEECCEEEECCCHHHHHHHHHCCCCCCCCEEEEEEEE
TAAGRENDATLQKLGSLYHTEAVKKFIDEKFGGTKIDVNKPISYLTEAK
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]