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The map label for this gene is coq7

Identifier: 50085492

GI number: 50085492

Start: 2367145

End: 2367780

Strand: Direct

Name: coq7

Synonym: ACIAD2405

Alternate gene names: 50085492

Gene position: 2367145-2367780 (Clockwise)

Preceding gene: 50085491

Following gene: 50085498

Centisome position: 65.78

GC content: 41.98

Gene sequence:

>636_bases
ATGCGTCATTACACTGGTATTGATCGTCTTATTAATTCTTTTGATCAAGCTTTACGCAGTTTAGTTCCAGGGACAACTGC
AGCACAGCGCAGCAATCCTGCCGAACAAACACAAGCACCTCTCACGGTGAGTGATGCAAGACATGTTGCAGGTTTAATGC
GCGTTAACCATAGCGGTGAAGTATGTGCACAAGCCCTGTATCATGGTCAGGCATTGACAGCTAAACTGCCAAATGTTCGT
TTGGAGATGGAACAGGCAGCAATTGAAGAACAAGACCATTTGGCATGGTGCGAAGACCGTTTAAAAGAACTGGATAGCGT
TCCAAGCCTACTTAATCCTGTCTGGTATAGTCTTTCTTTTGGTATGGGTGCAATTGCAGGTATTGCAGGTGATAAATACA
GCTTAGGTTTTGTTGCTGAAACTGAACGTCAAGTGAGTTCACATTTACAAGATCATCTTAAGCAGTTGCCAACGCATGAT
GAACGTTCTAAACGTATTTTAGAACAGATGAATCAAGATGAACTACATCATCGAGATACAGCACTTAATGCTGGTGGGGT
TGAATTGCCTGTTGCAGTCAAAATTACCATGACAGCCATTTCAAAACTTATGACCAAAACCAGCTATTACATTTAA

Upstream 100 bases:

>100_bases
GTGATCACTGCGGTCTTAAGTGCAATCTTCACAATCTGGTTGTTACGTAAACTTCCTCCTATGCTTCATCAGGCTCAAGA
TTCTTTAGAGGACTAACTTT

Downstream 100 bases:

>100_bases
GCCATCAATTCATTCAATAATAAAAACCCGCAAAAGTGGGTTTTATTATTTTAAGCCATGCTCGTATTTAAATTTCTCAA
GAACTCGAATTGCATCACGA

Product: ubiquinone biosynthesis protein

Products: NA

Alternate protein names: 5-demethoxyubiquinone hydroxylase; DMQ hydroxylase

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MRHYTGIDRLINSFDQALRSLVPGTTAAQRSNPAEQTQAPLTVSDARHVAGLMRVNHSGEVCAQALYHGQALTAKLPNVR
LEMEQAAIEEQDHLAWCEDRLKELDSVPSLLNPVWYSLSFGMGAIAGIAGDKYSLGFVAETERQVSSHLQDHLKQLPTHD
ERSKRILEQMNQDELHHRDTALNAGGVELPVAVKITMTAISKLMTKTSYYI

Sequences:

>Translated_211_residues
MRHYTGIDRLINSFDQALRSLVPGTTAAQRSNPAEQTQAPLTVSDARHVAGLMRVNHSGEVCAQALYHGQALTAKLPNVR
LEMEQAAIEEQDHLAWCEDRLKELDSVPSLLNPVWYSLSFGMGAIAGIAGDKYSLGFVAETERQVSSHLQDHLKQLPTHD
ERSKRILEQMNQDELHHRDTALNAGGVELPVAVKITMTAISKLMTKTSYYI
>Mature_211_residues
MRHYTGIDRLINSFDQALRSLVPGTTAAQRSNPAEQTQAPLTVSDARHVAGLMRVNHSGEVCAQALYHGQALTAKLPNVR
LEMEQAAIEEQDHLAWCEDRLKELDSVPSLLNPVWYSLSFGMGAIAGIAGDKYSLGFVAETERQVSSHLQDHLKQLPTHD
ERSKRILEQMNQDELHHRDTALNAGGVELPVAVKITMTAISKLMTKTSYYI

Specific function: Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol

COG id: COG2941

COG function: function code H; Ubiquinone biosynthesis protein COQ7

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COQ7 family

Homologues:

Organism=Caenorhabditis elegans, GI17552756, Length=145, Percent_Identity=29.6551724137931, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COQ7_ACIAD (Q6F9T3)

Other databases:

- EMBL:   CR543861
- RefSeq:   YP_047002.1
- ProteinModelPortal:   Q6F9T3
- STRING:   Q6F9T3
- GeneID:   2879449
- GenomeReviews:   CR543861_GR
- KEGG:   aci:ACIAD2405
- NMPDR:   fig|62977.3.peg.2289
- eggNOG:   COG2941
- HOGENOM:   HBG289195
- OMA:   YQGQALT
- PhylomeDB:   Q6F9T3
- ProtClustDB:   CLSK866016
- BioCyc:   ASP62977:ACIAD2405-MONOMER
- HAMAP:   MF_01658
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR011566
- Gene3D:   G3DSA:1.20.1260.10
- PANTHER:   PTHR11237

Pfam domain/function: PF03232 COQ7; SSF47240 Ferritin/RR_like

EC number: 1.14.13.-

Molecular weight: Translated: 23414; Mature: 23414

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHYTGIDRLINSFDQALRSLVPGTTAAQRSNPAEQTQAPLTVSDARHVAGLMRVNHSGE
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHCCCCCHHHHHHHHHHHHCCCCHH
VCAQALYHGQALTAKLPNVRLEMEQAAIEEQDHLAWCEDRLKELDSVPSLLNPVWYSLSF
HHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMGAIAGIAGDKYSLGFVAETERQVSSHLQDHLKQLPTHDERSKRILEQMNQDELHHRDT
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHH
ALNAGGVELPVAVKITMTAISKLMTKTSYYI
HCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRHYTGIDRLINSFDQALRSLVPGTTAAQRSNPAEQTQAPLTVSDARHVAGLMRVNHSGE
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHCCCCCHHHHHHHHHHHHCCCCHH
VCAQALYHGQALTAKLPNVRLEMEQAAIEEQDHLAWCEDRLKELDSVPSLLNPVWYSLSF
HHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMGAIAGIAGDKYSLGFVAETERQVSSHLQDHLKQLPTHDERSKRILEQMNQDELHHRDT
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHH
ALNAGGVELPVAVKITMTAISKLMTKTSYYI
HCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA