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The map label for this gene is ydhP [H]

Identifier: 50085473

GI number: 50085473

Start: 2342094

End: 2343305

Strand: Direct

Name: ydhP [H]

Synonym: ACIAD2385

Alternate gene names: 50085473

Gene position: 2342094-2343305 (Clockwise)

Preceding gene: 50085471

Following gene: 50085479

Centisome position: 65.08

GC content: 43.98

Gene sequence:

>1212_bases
ATGTCTTCTTCATCAAATACATCGGTTCCTCCCATCCGACAGTATCCCCTATTTCTTATTATTTTAGCACTTGCTACAGG
TGGTTTTTGTATTGGTACAACCGAGTTTGTGGCCATGGGTCTCATTCAGGAAATTGCAGCCGATTTACATATTAGCGTTC
CACAAGCAGGACATTTCATCAGTGCCTATGCTTTAGGTGTAGTTATTGGTGCCCCGGTGATTGCGATCTTGGGCGCACGC
GTGCCGCGCAAATCATTACTTCTAGGATTAATGCTGTTTTATGGCGTTGCCAATGCTTTGACAGCCTTAGCGAAAACACC
AGAAATGGTTCTGATATCACGTTTCATTGCTGGTTTCCCACACGGGGCATATTTTGGTGTAGCTGCACTGGTTGCCGCAG
AACTGGCTGGCCCTAAAAAACGTGCATCAGCAGTTGCACAAGTGATGATGGGATTGACCGTAGCAACTGTTTTAGGCGTT
CCACTTGCAACCTGGATTGGTCAACAATTTGGCTGGCGAGCAGGTTTTGAATTTTCTGCTGCAATTGCTTTTATTACTTT
AATTTCGGTGGCTATTTTTGTTCCGCACATTGCAGTCAGAACAACAGCCAGTATAAAAACCGAACTGGCTGGTCTTAAAA
ATATCAATATGTGGCTGACATTGGCTGTAGGTGCAATTGGTTTTGGTGGCATGTTTTCTGTATATAGCTATGTATCACCT
ATTCTTACAGAATATACCAAAGTCAATATTGATATCGTCCCGATTGCATTGGCCATTTGGGGTATTGGCATGGTCATTGG
TGGCTTGGTCGCTGGATGGTTGGCAGATAAAAATTTAAATAGAACTCTAGTTGGTGTCCTGATCAGTTCTGCACTTGCGT
TTATTCTTGCCAGCTTTCTTATGAGTAATATTTATACCGCCATAGCAGGCCTATTTTTAATTGGTATTACGGTGATGGGG
CTTGGTGGCGGCTTACAAATGCGTCTCATGGATGTTGCTGGCGATGCTCAAGGCGTAGCTGCTTCCCTCAATCATTCTGC
ATTTAACATTGCCAATGCACTCGGTGCATTCTTGGGTGGCTGGGTATTGAGCCATCAAATGGGATGGATTGCGCCAATCT
GGGTAGGCTTTGTTTTAAGCCTCGGAGGGTTGATTATTTTACTGATTGCCTTTGCTGTCGAGAAAAAAACTTCGTCAAAT
CAATGCGCTTAA

Upstream 100 bases:

>100_bases
AGCATTTGTTGAACCCAGTAATAGACACGAAAAATGTCTTAACTTTACTACGCAGTTTCCACTATAATTCCTTGCTATTT
TATATTCTCTCCAATTTTTT

Downstream 100 bases:

>100_bases
TCTTGTTAAACTTTTGAATGAATCACCATGATCAATATCATGATGATTCATGCTATTTAAGATACAATCTACTGATACGT
TGCCAGACGCTCTGATAGCA

Product: major facilitator superfamily permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MSSSSNTSVPPIRQYPLFLIILALATGGFCIGTTEFVAMGLIQEIAADLHISVPQAGHFISAYALGVVIGAPVIAILGAR
VPRKSLLLGLMLFYGVANALTALAKTPEMVLISRFIAGFPHGAYFGVAALVAAELAGPKKRASAVAQVMMGLTVATVLGV
PLATWIGQQFGWRAGFEFSAAIAFITLISVAIFVPHIAVRTTASIKTELAGLKNINMWLTLAVGAIGFGGMFSVYSYVSP
ILTEYTKVNIDIVPIALAIWGIGMVIGGLVAGWLADKNLNRTLVGVLISSALAFILASFLMSNIYTAIAGLFLIGITVMG
LGGGLQMRLMDVAGDAQGVAASLNHSAFNIANALGAFLGGWVLSHQMGWIAPIWVGFVLSLGGLIILLIAFAVEKKTSSN
QCA

Sequences:

>Translated_403_residues
MSSSSNTSVPPIRQYPLFLIILALATGGFCIGTTEFVAMGLIQEIAADLHISVPQAGHFISAYALGVVIGAPVIAILGAR
VPRKSLLLGLMLFYGVANALTALAKTPEMVLISRFIAGFPHGAYFGVAALVAAELAGPKKRASAVAQVMMGLTVATVLGV
PLATWIGQQFGWRAGFEFSAAIAFITLISVAIFVPHIAVRTTASIKTELAGLKNINMWLTLAVGAIGFGGMFSVYSYVSP
ILTEYTKVNIDIVPIALAIWGIGMVIGGLVAGWLADKNLNRTLVGVLISSALAFILASFLMSNIYTAIAGLFLIGITVMG
LGGGLQMRLMDVAGDAQGVAASLNHSAFNIANALGAFLGGWVLSHQMGWIAPIWVGFVLSLGGLIILLIAFAVEKKTSSN
QCA
>Mature_402_residues
SSSSNTSVPPIRQYPLFLIILALATGGFCIGTTEFVAMGLIQEIAADLHISVPQAGHFISAYALGVVIGAPVIAILGARV
PRKSLLLGLMLFYGVANALTALAKTPEMVLISRFIAGFPHGAYFGVAALVAAELAGPKKRASAVAQVMMGLTVATVLGVP
LATWIGQQFGWRAGFEFSAAIAFITLISVAIFVPHIAVRTTASIKTELAGLKNINMWLTLAVGAIGFGGMFSVYSYVSPI
LTEYTKVNIDIVPIALAIWGIGMVIGGLVAGWLADKNLNRTLVGVLISSALAFILASFLMSNIYTAIAGLFLIGITVMGL
GGGLQMRLMDVAGDAQGVAASLNHSAFNIANALGAFLGGWVLSHQMGWIAPIWVGFVLSLGGLIILLIAFAVEKKTSSNQ
CA

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=392, Percent_Identity=37.7551020408163, Blast_Score=215, Evalue=4e-57,
Organism=Escherichia coli, GI1786595, Length=346, Percent_Identity=33.8150289017341, Blast_Score=184, Evalue=7e-48,
Organism=Escherichia coli, GI1787808, Length=356, Percent_Identity=28.6516853932584, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI145693198, Length=372, Percent_Identity=20.4301075268817, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41967; Mature: 41835

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSSNTSVPPIRQYPLFLIILALATGGFCIGTTEFVAMGLIQEIAADLHISVPQAGHFI
CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHEECCCCCCHHH
SAYALGVVIGAPVIAILGARVPRKSLLLGLMLFYGVANALTALAKTPEMVLISRFIAGFP
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
HGAYFGVAALVAAELAGPKKRASAVAQVMMGLTVATVLGVPLATWIGQQFGWRAGFEFSA
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
AIAFITLISVAIFVPHIAVRTTASIKTELAGLKNINMWLTLAVGAIGFGGMFSVYSYVSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
ILTEYTKVNIDIVPIALAIWGIGMVIGGLVAGWLADKNLNRTLVGVLISSALAFILASFL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
MSNIYTAIAGLFLIGITVMGLGGGLQMRLMDVAGDAQGVAASLNHSAFNIANALGAFLGG
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHH
WVLSHQMGWIAPIWVGFVLSLGGLIILLIAFAVEKKTSSNQCA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SSSSNTSVPPIRQYPLFLIILALATGGFCIGTTEFVAMGLIQEIAADLHISVPQAGHFI
CCCCCCCCCCHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHEECCCCCCHHH
SAYALGVVIGAPVIAILGARVPRKSLLLGLMLFYGVANALTALAKTPEMVLISRFIAGFP
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
HGAYFGVAALVAAELAGPKKRASAVAQVMMGLTVATVLGVPLATWIGQQFGWRAGFEFSA
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
AIAFITLISVAIFVPHIAVRTTASIKTELAGLKNINMWLTLAVGAIGFGGMFSVYSYVSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
ILTEYTKVNIDIVPIALAIWGIGMVIGGLVAGWLADKNLNRTLVGVLISSALAFILASFL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
MSNIYTAIAGLFLIGITVMGLGGGLQMRLMDVAGDAQGVAASLNHSAFNIANALGAFLGG
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHH
WVLSHQMGWIAPIWVGFVLSLGGLIILLIAFAVEKKTSSNQCA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]