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The map label for this gene is xcpW [H]

Identifier: 50085446

GI number: 50085446

Start: 2316171

End: 2316797

Strand: Reverse

Name: xcpW [H]

Synonym: ACIAD2355

Alternate gene names: 50085446

Gene position: 2316797-2316171 (Counterclockwise)

Preceding gene: 50085447

Following gene: 50085445

Centisome position: 64.38

GC content: 36.2

Gene sequence:

>627_bases
ATGAAAAGGCATCTAGGTTTTACATTGATTGAACTGCTGGTATCGATTGCAATTTTTGCAATACTTTCTGCGTTGGGATG
GAAAATATTTGACTATCTCATCAAAATTAAAGACCGTAACCAGGTATATGAACAACAATTATTTGAGTTGCAGGATGCAT
ATCAGCTTTTACTTCGTGATAGTTTGCAAATTATTCCGAATACAGCAAACATCAATGGTCAGCTTAGGCCTGCATTGAGT
TTAAGTGAAAATATATTGCAATTTAGTAGGGGTGGGGTAAGCGATCCACTCAAAGAGGGTTTGGCACCTTATGAACGCAT
AGAATATCGTTATGTGGCTTCTGAAAAAGTGGTATATCGACTCAAATATAAAAACCTGAATGTTGTTAGTAGTGAGCAAC
CCGTATCTAGTGTTGTACTTAAAAATGTAGATCAGTTTCAAATTGCTGTGCTTAATCCACAGCTATCAACTCAATGGCCA
GATCCACAAATAGATCTTACACAGTCTCAAAATCTAAGAATTTTGCCAAGAGGTTTGAAAGTTAATCTTAATATTGCGGG
AACAGAATATGAATGGATTTTCCCGCTGATGGATACTCAGTTTTTGAGTGGTGTTCAGAACAATTAA

Upstream 100 bases:

>100_bases
TTGAAATACAGGTTAGTCTTTTTGATACCCAGCAAAATAAGGTTGAAGCGGGAATTACCAATCTGGTTTTTTTTAATTAT
CCGCAAAAAGAGAATGCCTC

Downstream 100 bases:

>100_bases
GAGGGTGACGTGATATGAAACAACAAAAAGGCGTCGCCCTCATTACAATATTGGTCATGGTGGCTTTGGCTACAATTTTG
GCTGCGACCATAGCGAAGCA

Product: general secretion pathway protein J

Products: NA

Alternate protein names: PilD-dependent protein pddD [H]

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MKRHLGFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRDSLQIIPNTANINGQLRPALS
LSENILQFSRGGVSDPLKEGLAPYERIEYRYVASEKVVYRLKYKNLNVVSSEQPVSSVVLKNVDQFQIAVLNPQLSTQWP
DPQIDLTQSQNLRILPRGLKVNLNIAGTEYEWIFPLMDTQFLSGVQNN

Sequences:

>Translated_208_residues
MKRHLGFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRDSLQIIPNTANINGQLRPALS
LSENILQFSRGGVSDPLKEGLAPYERIEYRYVASEKVVYRLKYKNLNVVSSEQPVSSVVLKNVDQFQIAVLNPQLSTQWP
DPQIDLTQSQNLRILPRGLKVNLNIAGTEYEWIFPLMDTQFLSGVQNN
>Mature_208_residues
MKRHLGFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRDSLQIIPNTANINGQLRPALS
LSENILQFSRGGVSDPLKEGLAPYERIEYRYVASEKVVYRLKYKNLNVVSSEQPVSSVVLKNVDQFQIAVLNPQLSTQWP
DPQIDLTQSQNLRILPRGLKVNLNIAGTEYEWIFPLMDTQFLSGVQNN

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: COG4795

COG function: function code U; Type II secretory pathway, component PulJ

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP J family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010055
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 23853; Mature: 23853

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRHLGFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
SLQIIPNTANINGQLRPALSLSENILQFSRGGVSDPLKEGLAPYERIEYRYVASEKVVYR
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHEEEEECCEEEEE
LKYKNLNVVSSEQPVSSVVLKNVDQFQIAVLNPQLSTQWPDPQIDLTQSQNLRILPRGLK
EEECCCCEECCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCEEEECCEE
VNLNIAGTEYEWIFPLMDTQFLSGVQNN
EEEEEECCCEEEEECHHHHHHHHHCCCC
>Mature Secondary Structure
MKRHLGFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
SLQIIPNTANINGQLRPALSLSENILQFSRGGVSDPLKEGLAPYERIEYRYVASEKVVYR
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHEEEEECCEEEEE
LKYKNLNVVSSEQPVSSVVLKNVDQFQIAVLNPQLSTQWPDPQIDLTQSQNLRILPRGLK
EEECCCCEECCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCEEEECCEE
VNLNIAGTEYEWIFPLMDTQFLSGVQNN
EEEEEECCCEEEEECHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1588814; 1309616; 10984043 [H]