| Definition | Acinetobacter sp. ADP1 chromosome, complete genome. |
|---|---|
| Accession | NC_005966 |
| Length | 3,598,621 |
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The map label for this gene is mrcB [H]
Identifier: 50085340
GI number: 50085340
Start: 2204321
End: 2206720
Strand: Direct
Name: mrcB [H]
Synonym: ACIAD2234
Alternate gene names: 50085340
Gene position: 2204321-2206720 (Clockwise)
Preceding gene: 50085339
Following gene: 50085341
Centisome position: 61.25
GC content: 41.42
Gene sequence:
>2400_bases ATGAAGTTTGAACGCGGCATAGGTTTTTTTGCGCTGATTTTTGCTATTCTTGTTATTGGCGGTTTTGTTGCTTTTAGTAT TTATATTATTCGTTTAGATACAGTGATACGCCATAAATTTGAAGGACAGCGCTGGGATATCCCTGCAAAGGTATTTGCAC GTCCATTAGAGATTTATACCAATGCACCGATTACCCAGCAAAATCTGACACAAGAGCTCGGTTTACTTGGCTACAAAAAT TCTGAAAACTATACCAAGTCGGGAACATATGTCACCCAAGGCAATAGTATGTATGTACATACGCGTGGCTTTGACTTTGG TGATAGTAGTGAACCTGAACAAGTACTTGAATTGACATTTGCAAATGATCAGGTTGCAGATGTACGTGCCACTAAACCTT CTACCACTGGTATTGCCCGATTAGAACCACTTTTAATTGGCGGAATTTATCCTCAGCACAATGAAGATCGTGTCTTAATC AAACTCAATAAAGTTCCTAAAACGTTAATTGAAGCACTTATTGCAACAGAAGACCGTAATTTTTATCATCATCATGGCTT ATCAGTACGTGGTACTGCACGTGCGCTAGTAAGTAACGTGACAGGTGGTAAACGCCAAGGCGGTTCAACACTCACTCAGC AATTGGTTAAAAATTTCTATTTGAGTCCAGAGCGTACTTTAAAGCGTAAGGTCAACGAAGCCTTGATGTCATTGCTACTT GAATTACACTACAATAAAGATGAAATTCTTGAAGCTTATTTAAATGAAGTTAATCTCGGACAAAACGGTAACTATTCAAT TAATGGCTACGGTCTGGCTTCACAATTTTATTTTGGATTACCATTACGCGAACTCAATATTGCGCAGCAAGCTTACTTGG TGGGTCTGGTACAAGGGCCATCACTCTATAACCCTTGGCGCAACCCAGAAGGTGCATTAAAACGTCGTAATACTGTTTTG AATAACATGTTGGTTATGGGTTATTTATCTCAGTCACAATACGACGAAGAAGTTGCCCGCCCTTTAGGTGTGGTATCAAA ACCAACACTTGGCCCTGCTAAATTCCCTGATTTTCTAGATATTGTCCGCCGTCAGCTACGTGCCGAATATCAAGAAAGCG ATTTGACCAACCAGGGTCTACGTATTTTTACAACGCTTGATCCAATTGCACAAACCAATGTTCAAAATGCCTTTAAAGCG TCTGTGAGTCAGTTGGCCAAAGGTAACCCGTCTCGATTACGTAATTTACAAGGTGCTGTCTTGATTGCGCATCCAGAAAA TGGCGAGTTGATTGCGGCGGTAGGTTCAACACAAGACTTTACAGGTTTTAACCGTGCAGTAGATGCGAAACGTCAAGTCG GTTCATTATTAAAACCAGTCATTTATCTCAATGCAATTGAATCGGGTCGCTACAATTGGGCAAGCCGTATTCAGGATAGT GCTGTCAGCATTCCTGTTGGAAATGATCAAAGTTGGACGCCAAAGAACTACAGTGGCGGTGAACATGGTGTCGTTCCAAT GGTACAAGCGCTCGCCAACTCTTATAACCTATCTGCGGTACGTTTAGGTCAGGAGTTTGGTGTATCTACCTTTAGTAATC AGTTGAAGAAATTTGGTGTCACATCGAATATTCCGTCTTATCCATCTATTTTTCTTGGTGCTGTGAATATGTCACCAATG GAAATGCTTGGTATTTATAGCAACTTTGCGACAGGTGGATTTAAATATCCAACGCGCGCTATTCGTTCAGTGGTAGATGC CAATGGTCGGGTATTAGAACGTTTTGGACTAAATGTTCAACAAACGATCGAGCCATCCTCTGCTTATATCTTAAACTATG GTTTACAACAGGTTATGGCATCAGGTACAGGCCGCTCGGCTTATAATAGTTTGCCAACCTCTTTAAAACTCGCAGGTAAA TCTGGTACTACCAATGATACACGTGACTCTTGGTTTGCTGGTTATTCAGGTAACTACGTTGCGGTAGTCTGGTTAGGTTT AGATGATAATAAGATTACAGGTCTGACGGGCTCGTCAGGCGCCCTGCCTGTCTGGACAAATGTGATGCGTCAGTTGCGTC AGCAGCCAGTAAATTTACGCCAGCCAGATGATGTACAGTGGCAATGGATTGATGTTGCAACTGGAAACCTTTCAGCACAA GGCTGCGAAGGTGCAATGTATATTCCAATGTTACGCTACACGGTTCCTCAACAAGCAACTGCTTGCGGACTACCTAACTA TCAAACAGCACCTATAGATGGCGATGGAACAGATAGCAATCCAAATACCAATCAGGGCGATACTACTGATCAATATATTC AAGAAAGTGAAAATCAAATGCAGAATGATTTGTCGCAAAATCAAAATAAAGTCATTTCAAGTGGTAGTTATAACTACTAA
Upstream 100 bases:
>100_bases TAATTTTGGCTTTTTCAGTTTGTTCACAGTTTTATCATTGCAAAGAAAATGTAGCTATCGCATGATTGGCAGAATTGATT AGACTTTTTATGACAGATTT
Downstream 100 bases:
>100_bases CTAGCGTAATTTGATGAGAGATACTATGTTGAAAAAAAGTCTTTTTATCTTAGGTACTATATCGATGGTGGGCTGTTCAA CGCTCACCTCGCTTGAACAA
Product: penicillin-binding protein 1B
Products: NA
Alternate protein names: PBP-1b; PBP1b; Murein polymerase; Penicillin-insensitive transglycosylase; Peptidoglycan TGase; Peptidoglycan glycosyltransferase; Penicillin-sensitive transpeptidase; DD-transpeptidase [H]
Number of amino acids: Translated: 799; Mature: 799
Protein sequence:
>799_residues MKFERGIGFFALIFAILVIGGFVAFSIYIIRLDTVIRHKFEGQRWDIPAKVFARPLEIYTNAPITQQNLTQELGLLGYKN SENYTKSGTYVTQGNSMYVHTRGFDFGDSSEPEQVLELTFANDQVADVRATKPSTTGIARLEPLLIGGIYPQHNEDRVLI KLNKVPKTLIEALIATEDRNFYHHHGLSVRGTARALVSNVTGGKRQGGSTLTQQLVKNFYLSPERTLKRKVNEALMSLLL ELHYNKDEILEAYLNEVNLGQNGNYSINGYGLASQFYFGLPLRELNIAQQAYLVGLVQGPSLYNPWRNPEGALKRRNTVL NNMLVMGYLSQSQYDEEVARPLGVVSKPTLGPAKFPDFLDIVRRQLRAEYQESDLTNQGLRIFTTLDPIAQTNVQNAFKA SVSQLAKGNPSRLRNLQGAVLIAHPENGELIAAVGSTQDFTGFNRAVDAKRQVGSLLKPVIYLNAIESGRYNWASRIQDS AVSIPVGNDQSWTPKNYSGGEHGVVPMVQALANSYNLSAVRLGQEFGVSTFSNQLKKFGVTSNIPSYPSIFLGAVNMSPM EMLGIYSNFATGGFKYPTRAIRSVVDANGRVLERFGLNVQQTIEPSSAYILNYGLQQVMASGTGRSAYNSLPTSLKLAGK SGTTNDTRDSWFAGYSGNYVAVVWLGLDDNKITGLTGSSGALPVWTNVMRQLRQQPVNLRQPDDVQWQWIDVATGNLSAQ GCEGAMYIPMLRYTVPQQATACGLPNYQTAPIDGDGTDSNPNTNQGDTTDQYIQESENQMQNDLSQNQNKVISSGSYNY
Sequences:
>Translated_799_residues MKFERGIGFFALIFAILVIGGFVAFSIYIIRLDTVIRHKFEGQRWDIPAKVFARPLEIYTNAPITQQNLTQELGLLGYKN SENYTKSGTYVTQGNSMYVHTRGFDFGDSSEPEQVLELTFANDQVADVRATKPSTTGIARLEPLLIGGIYPQHNEDRVLI KLNKVPKTLIEALIATEDRNFYHHHGLSVRGTARALVSNVTGGKRQGGSTLTQQLVKNFYLSPERTLKRKVNEALMSLLL ELHYNKDEILEAYLNEVNLGQNGNYSINGYGLASQFYFGLPLRELNIAQQAYLVGLVQGPSLYNPWRNPEGALKRRNTVL NNMLVMGYLSQSQYDEEVARPLGVVSKPTLGPAKFPDFLDIVRRQLRAEYQESDLTNQGLRIFTTLDPIAQTNVQNAFKA SVSQLAKGNPSRLRNLQGAVLIAHPENGELIAAVGSTQDFTGFNRAVDAKRQVGSLLKPVIYLNAIESGRYNWASRIQDS AVSIPVGNDQSWTPKNYSGGEHGVVPMVQALANSYNLSAVRLGQEFGVSTFSNQLKKFGVTSNIPSYPSIFLGAVNMSPM EMLGIYSNFATGGFKYPTRAIRSVVDANGRVLERFGLNVQQTIEPSSAYILNYGLQQVMASGTGRSAYNSLPTSLKLAGK SGTTNDTRDSWFAGYSGNYVAVVWLGLDDNKITGLTGSSGALPVWTNVMRQLRQQPVNLRQPDDVQWQWIDVATGNLSAQ GCEGAMYIPMLRYTVPQQATACGLPNYQTAPIDGDGTDSNPNTNQGDTTDQYIQESENQMQNDLSQNQNKVISSGSYNY >Mature_799_residues MKFERGIGFFALIFAILVIGGFVAFSIYIIRLDTVIRHKFEGQRWDIPAKVFARPLEIYTNAPITQQNLTQELGLLGYKN SENYTKSGTYVTQGNSMYVHTRGFDFGDSSEPEQVLELTFANDQVADVRATKPSTTGIARLEPLLIGGIYPQHNEDRVLI KLNKVPKTLIEALIATEDRNFYHHHGLSVRGTARALVSNVTGGKRQGGSTLTQQLVKNFYLSPERTLKRKVNEALMSLLL ELHYNKDEILEAYLNEVNLGQNGNYSINGYGLASQFYFGLPLRELNIAQQAYLVGLVQGPSLYNPWRNPEGALKRRNTVL NNMLVMGYLSQSQYDEEVARPLGVVSKPTLGPAKFPDFLDIVRRQLRAEYQESDLTNQGLRIFTTLDPIAQTNVQNAFKA SVSQLAKGNPSRLRNLQGAVLIAHPENGELIAAVGSTQDFTGFNRAVDAKRQVGSLLKPVIYLNAIESGRYNWASRIQDS AVSIPVGNDQSWTPKNYSGGEHGVVPMVQALANSYNLSAVRLGQEFGVSTFSNQLKKFGVTSNIPSYPSIFLGAVNMSPM EMLGIYSNFATGGFKYPTRAIRSVVDANGRVLERFGLNVQQTIEPSSAYILNYGLQQVMASGTGRSAYNSLPTSLKLAGK SGTTNDTRDSWFAGYSGNYVAVVWLGLDDNKITGLTGSSGALPVWTNVMRQLRQQPVNLRQPDDVQWQWIDVATGNLSAQ GCEGAMYIPMLRYTVPQQATACGLPNYQTAPIDGDGTDSNPNTNQGDTTDQYIQESENQMQNDLSQNQNKVISSGSYNY
Specific function: Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal
COG id: COG0744
COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)
Gene ontology:
Cell location: Cell inner membrane; Single-pass type II membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI1786343, Length=752, Percent_Identity=37.3670212765958, Blast_Score=469, Evalue=1e-133, Organism=Escherichia coli, GI1788867, Length=560, Percent_Identity=29.4642857142857, Blast_Score=174, Evalue=3e-44, Organism=Escherichia coli, GI87082258, Length=258, Percent_Identity=37.984496124031, Blast_Score=172, Evalue=8e-44, Organism=Escherichia coli, GI1789601, Length=191, Percent_Identity=29.3193717277487, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001264 - InterPro: IPR011813 - InterPro: IPR001460 [H]
Pfam domain/function: PF00912 Transgly; PF00905 Transpeptidase [H]
EC number: =2.4.1.129 [H]
Molecular weight: Translated: 88208; Mature: 88208
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFERGIGFFALIFAILVIGGFVAFSIYIIRLDTVIRHKFEGQRWDIPAKVFARPLEIYT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHC NAPITQQNLTQELGLLGYKNSENYTKSGTYVTQGNSMYVHTRGFDFGDSSEPEQVLELTF CCCCCHHHHHHHHHCEECCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCHHHHHEEEE ANDQVADVRATKPSTTGIARLEPLLIGGIYPQHNEDRVLIKLNKVPKTLIEALIATEDRN CCCCCCEEECCCCCCCCHHHHCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCC FYHHHGLSVRGTARALVSNVTGGKRQGGSTLTQQLVKNFYLSPERTLKRKVNEALMSLLL CHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ELHYNKDEILEAYLNEVNLGQNGNYSINGYGLASQFYFGLPLRELNIAQQAYLVGLVQGP HHCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHEECCCHHHHHHHHHHHEEEEECCC SLYNPWRNPEGALKRRNTVLNNMLVMGYLSQSQYDEEVARPLGVVSKPTLGPAKFPDFLD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH IVRRQLRAEYQESDLTNQGLRIFTTLDPIAQTNVQNAFKASVSQLAKGNPSRLRNLQGAV HHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEE LIAHPENGELIAAVGSTQDFTGFNRAVDAKRQVGSLLKPVIYLNAIESGRYNWASRIQDS EEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC AVSIPVGNDQSWTPKNYSGGEHGVVPMVQALANSYNLSAVRLGQEFGVSTFSNQLKKFGV EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHCHHHHHHHHHHCCC TSNIPSYPSIFLGAVNMSPMEMLGIYSNFATGGFKYPTRAIRSVVDANGRVLERFGLNVQ CCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHCCCHH QTIEPSSAYILNYGLQQVMASGTGRSAYNSLPTSLKLAGKSGTTNDTRDSWFAGYSGNYV HHCCCCCHHEEHHHHHHHHHCCCCCHHHHCCCCCEEEECCCCCCCCCCCCEECCCCCCEE AVVWLGLDDNKITGLTGSSGALPVWTNVMRQLRQQPVNLRQPDDVQWQWIDVATGNLSAQ EEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCC GCEGAMYIPMLRYTVPQQATACGLPNYQTAPIDGDGTDSNPNTNQGDTTDQYIQESENQM CCCCEEEHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH QNDLSQNQNKVISSGSYNY HHHHHHCHHHEECCCCCCC >Mature Secondary Structure MKFERGIGFFALIFAILVIGGFVAFSIYIIRLDTVIRHKFEGQRWDIPAKVFARPLEIYT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHC NAPITQQNLTQELGLLGYKNSENYTKSGTYVTQGNSMYVHTRGFDFGDSSEPEQVLELTF CCCCCHHHHHHHHHCEECCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCHHHHHEEEE ANDQVADVRATKPSTTGIARLEPLLIGGIYPQHNEDRVLIKLNKVPKTLIEALIATEDRN CCCCCCEEECCCCCCCCHHHHCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCC FYHHHGLSVRGTARALVSNVTGGKRQGGSTLTQQLVKNFYLSPERTLKRKVNEALMSLLL CHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ELHYNKDEILEAYLNEVNLGQNGNYSINGYGLASQFYFGLPLRELNIAQQAYLVGLVQGP HHCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHEECCCHHHHHHHHHHHEEEEECCC SLYNPWRNPEGALKRRNTVLNNMLVMGYLSQSQYDEEVARPLGVVSKPTLGPAKFPDFLD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH IVRRQLRAEYQESDLTNQGLRIFTTLDPIAQTNVQNAFKASVSQLAKGNPSRLRNLQGAV HHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEE LIAHPENGELIAAVGSTQDFTGFNRAVDAKRQVGSLLKPVIYLNAIESGRYNWASRIQDS EEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC AVSIPVGNDQSWTPKNYSGGEHGVVPMVQALANSYNLSAVRLGQEFGVSTFSNQLKKFGV EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHCHHHHHHHHHHCCC TSNIPSYPSIFLGAVNMSPMEMLGIYSNFATGGFKYPTRAIRSVVDANGRVLERFGLNVQ CCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHCCCHH QTIEPSSAYILNYGLQQVMASGTGRSAYNSLPTSLKLAGKSGTTNDTRDSWFAGYSGNYV HHCCCCCHHEEHHHHHHHHHCCCCCHHHHCCCCCEEEECCCCCCCCCCCCEECCCCCCEE AVVWLGLDDNKITGLTGSSGALPVWTNVMRQLRQQPVNLRQPDDVQWQWIDVATGNLSAQ EEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCC GCEGAMYIPMLRYTVPQQATACGLPNYQTAPIDGDGTDSNPNTNQGDTTDQYIQESENQM CCCCEEEHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH QNDLSQNQNKVISSGSYNY HHHHHHCHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]