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The map label for this gene is 50085110

Identifier: 50085110

GI number: 50085110

Start: 1961807

End: 1962409

Strand: Direct

Name: 50085110

Synonym: ACIAD1973

Alternate gene names: NA

Gene position: 1961807-1962409 (Clockwise)

Preceding gene: 50085089

Following gene: 50085114

Centisome position: 54.52

GC content: 39.97

Gene sequence:

>603_bases
CTGATAATGAACTATCTAAATCGTGAACAGCGTCGTGCCATGATTATTGATGCAGCTAAAGAAGTTGCTTTACAAGACGG
ATTGAATGGTTTGACGGTAAGGCGTATTGCTACAGAGGCGCAAGTCTCTACAGGACAAGTGCATCATCATTTTCAATCCA
GCTCTCATTTAAAAGCAGAAGTATTTATCGAACTGATGGATCAACTCACTGAAGTTGAAAAACAAATGCAAACATCTAAC
AGTTTTGAAAGATTATCGTTACTACTCGGTTTTGAAAATCTGGAGCAGACACAACCTTATCTTCGATTATGGAATGAAGC
TGAAGTATTGATTGATCAGGATATCGAGATTAAAAGAGCTTACAATATCACGATGGAACGTTGGCATAGCACGTTGGTGA
ATGCAATTGAGCAAGGAATGGAAAATCACGAGTTTTCGCTTCCTTTACACAGTCCAATTAAAGACATCGCATGGCGACTC
ATCGCTTTTGTGTGCGGCATGGAAGGTATTTATCAACTCGGTTTAAATGGTCTCGACGCGCATTCTTTCAAACATCATGT
CGAGATCATGCTAGATATGGAGTTGAGACCTAAAACGCGTTAG

Upstream 100 bases:

>100_bases
CCCAAATTAAAGTTGGACACTTGTTCAAGTTGAGGACATTATATTCAAACTTGAACAGATGTCCAACTTTGTTTAATATG
TCTTCTGTAATTGAGGTAGA

Downstream 100 bases:

>100_bases
AACCAACCTTTACCTCCTTTTATAATCTGGTCTGCACATCGCAAAGTCTCTTGAGTTAACCCCCAAAGCCGATAATCGCC
TGTGATCGACCCAATTTGAA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; TetR Family Regulatory Protein; Regulatory Protein

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MIMNYLNREQRRAMIIDAAKEVALQDGLNGLTVRRIATEAQVSTGQVHHHFQSSSHLKAEVFIELMDQLTEVEKQMQTSN
SFERLSLLLGFENLEQTQPYLRLWNEAEVLIDQDIEIKRAYNITMERWHSTLVNAIEQGMENHEFSLPLHSPIKDIAWRL
IAFVCGMEGIYQLGLNGLDAHSFKHHVEIMLDMELRPKTR

Sequences:

>Translated_200_residues
MIMNYLNREQRRAMIIDAAKEVALQDGLNGLTVRRIATEAQVSTGQVHHHFQSSSHLKAEVFIELMDQLTEVEKQMQTSN
SFERLSLLLGFENLEQTQPYLRLWNEAEVLIDQDIEIKRAYNITMERWHSTLVNAIEQGMENHEFSLPLHSPIKDIAWRL
IAFVCGMEGIYQLGLNGLDAHSFKHHVEIMLDMELRPKTR
>Mature_200_residues
MIMNYLNREQRRAMIIDAAKEVALQDGLNGLTVRRIATEAQVSTGQVHHHFQSSSHLKAEVFIELMDQLTEVEKQMQTSN
SFERLSLLLGFENLEQTQPYLRLWNEAEVLIDQDIEIKRAYNITMERWHSTLVNAIEQGMENHEFSLPLHSPIKDIAWRL
IAFVCGMEGIYQLGLNGLDAHSFKHHVEIMLDMELRPKTR

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23226; Mature: 23226

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMNYLNREQRRAMIIDAAKEVALQDGLNGLTVRRIATEAQVSTGQVHHHFQSSSHLKAE
CCCCHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
VFIELMDQLTEVEKQMQTSNSFERLSLLLGFENLEQTQPYLRLWNEAEVLIDQDIEIKRA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHEEECCCCHHHHH
YNITMERWHSTLVNAIEQGMENHEFSLPLHSPIKDIAWRLIAFVCGMEGIYQLGLNGLDA
HHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCCCH
HSFKHHVEIMLDMELRPKTR
HHHHHHEEEEEECCCCCCCC
>Mature Secondary Structure
MIMNYLNREQRRAMIIDAAKEVALQDGLNGLTVRRIATEAQVSTGQVHHHFQSSSHLKAE
CCCCHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
VFIELMDQLTEVEKQMQTSNSFERLSLLLGFENLEQTQPYLRLWNEAEVLIDQDIEIKRA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHEEECCCCHHHHH
YNITMERWHSTLVNAIEQGMENHEFSLPLHSPIKDIAWRLIAFVCGMEGIYQLGLNGLDA
HHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCCCH
HSFKHHVEIMLDMELRPKTR
HHHHHHEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA