Click here to switch to the map view.

The map label for this gene is nasT [H]

Identifier: 50085053

GI number: 50085053

Start: 1904224

End: 1904829

Strand: Direct

Name: nasT [H]

Synonym: ACIAD1913

Alternate gene names: 50085053

Gene position: 1904224-1904829 (Clockwise)

Preceding gene: 50085052

Following gene: 50085054

Centisome position: 52.92

GC content: 37.95

Gene sequence:

>606_bases
ATGTCTAAATTAAAAATTGCACTCATTGATGATGACCTCGAACGAGCCGAATTTATTCGGCAGGATTTACGTGCACATGA
TTTTGATGTCGTTGCTTGCATGACACTGGATCATTTGAATGTACTCAAACTTGAAAAACTTCAGGCCGATGTTATTTTGC
TGGATATGGATCATCCTCACCGAGATATTATAGAAAGCTGTGTCAGCCGTTTCGATTTACCTACGGTACTTTTTACCAAA
AACACGCATAAAGATACGATTAAGCAAGCCATTGCTGCTGGTGTAACAGCCTATATTGTCGATGGAATTGACCCATCACG
TTTAGATACCATTCTAGAAATATCAATTGAGCAGTATAAAAAGCATAAGCAGCTTGAGAGTGATCTCAAAGAAACCAAAA
TAAAACTGGCAGACCGTAAAGATATCGAAAAAGCCAAAGTTTTATTAATGCAGTTACATCACTTGAGTGAAGATACTGCA
TTTCAATTGTTGCGTAAAAATGCCATGAGTCATCGTATCACTATGGGAGAAATGGCACGGCGTTTAATTGATGCACAACA
GTTACTTCTTAACCCGTTAAAAGAGGATTCTCATGAGTCAGATTGA

Upstream 100 bases:

>100_bases
ATTGCATTGTTTTTTTCATGGCATCGATTTTGCAATGCAATTTTGTCATTGATTTCGCTTACACTATTTCGCAAATGCGA
AAAAATTTGCTCTATTTCTT

Downstream 100 bases:

>100_bases
AAAAAAACAATTGCAGCTCGGATATATTCCTCTTTTAGACTGCATTGCACTCCTTTGGGCCAAAGAACGTGGCTACTTTG
AAGAAATGGGATTAGATGTC

Product: response regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MSKLKIALIDDDLERAEFIRQDLRAHDFDVVACMTLDHLNVLKLEKLQADVILLDMDHPHRDIIESCVSRFDLPTVLFTK
NTHKDTIKQAIAAGVTAYIVDGIDPSRLDTILEISIEQYKKHKQLESDLKETKIKLADRKDIEKAKVLLMQLHHLSEDTA
FQLLRKNAMSHRITMGEMARRLIDAQQLLLNPLKEDSHESD

Sequences:

>Translated_201_residues
MSKLKIALIDDDLERAEFIRQDLRAHDFDVVACMTLDHLNVLKLEKLQADVILLDMDHPHRDIIESCVSRFDLPTVLFTK
NTHKDTIKQAIAAGVTAYIVDGIDPSRLDTILEISIEQYKKHKQLESDLKETKIKLADRKDIEKAKVLLMQLHHLSEDTA
FQLLRKNAMSHRITMGEMARRLIDAQQLLLNPLKEDSHESD
>Mature_200_residues
SKLKIALIDDDLERAEFIRQDLRAHDFDVVACMTLDHLNVLKLEKLQADVILLDMDHPHRDIIESCVSRFDLPTVLFTKN
THKDTIKQAIAAGVTAYIVDGIDPSRLDTILEISIEQYKKHKQLESDLKETKIKLADRKDIEKAKVLLMQLHHLSEDTAF
QLLRKNAMSHRITMGEMARRLIDAQQLLLNPLKEDSHESD

Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]

COG id: COG3707

COG function: function code T; Response regulator with putative antiterminator output domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005561
- InterPro:   IPR011006
- InterPro:   IPR008327
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23142; Mature: 23011

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS50921 ANTAR ; PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLKIALIDDDLERAEFIRQDLRAHDFDVVACMTLDHLNVLKLEKLQADVILLDMDHPH
CCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEHHCCCHHHHHHHHCCCEEEEECCCCH
RDIIESCVSRFDLPTVLFTKNTHKDTIKQAIAAGVTAYIVDGIDPSRLDTILEISIEQYK
HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KHKQLESDLKETKIKLADRKDIEKAKVLLMQLHHLSEDTAFQLLRKNAMSHRITMGEMAR
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHH
RLIDAQQLLLNPLKEDSHESD
HHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SKLKIALIDDDLERAEFIRQDLRAHDFDVVACMTLDHLNVLKLEKLQADVILLDMDHPH
CCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEHHCCCHHHHHHHHCCCEEEEECCCCH
RDIIESCVSRFDLPTVLFTKNTHKDTIKQAIAAGVTAYIVDGIDPSRLDTILEISIEQYK
HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KHKQLESDLKETKIKLADRKDIEKAKVLLMQLHHLSEDTAFQLLRKNAMSHRITMGEMAR
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHH
RLIDAQQLLLNPLKEDSHESD
HHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]