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The map label for this gene is ydeK [H]

Identifier: 50085037

GI number: 50085037

Start: 1886048

End: 1886923

Strand: Reverse

Name: ydeK [H]

Synonym: ACIAD1896

Alternate gene names: 50085037

Gene position: 1886923-1886048 (Counterclockwise)

Preceding gene: 50085039

Following gene: 50085032

Centisome position: 52.43

GC content: 38.24

Gene sequence:

>876_bases
ATGATTATGAATTCTAAATCTTTAGCGTGGATAAGCGGGTTTATTGGTGTTGTAATTTTTTCGGGTTCACTTCCAGCCAC
TCGTATTGCAGTAATGGATTTAGATCCGTGGTTTCTTACGGGTGCACGTGCCGTCATCGCTGGGATAATTGCCATAATTT
TGCTTAAATTATTTAATATTCAAATACCTAAAAGAGAAGACAGATTGAGTTTAGTGTATGTATCTATAGGTGTGGTCATA
GGATTTCCATTATTTACAGCTTTAGCACTGCAATATATGAATGCTGCTTCATCAATTGTGTTTATTGGATTATTACCATT
AAGTACAGCCATATTTGCAGTTATCTGTGGTGGGGAGCATCCGCAAAAAAACTTTTGGATTTTTGTTTTAATAGGTGCTG
GTCTTGTCATTCTGTATATTTTTCTAGAGGCTTCGCCAAATACAAATCATATTTTAGGCATCTTTTATATGCTGATATCG
GTTCTTGTATGTGGACTCGGTTATGCAGAAGGCGGGAAATTGGCACGTAAGATGGGAGGCTGGCAAGTGATTTGTTGGGC
ACTAGTGCTTTCTCTACCTATTATGCTGGGGATTATGGTTTGGAATTATTCTAACGACGTAATCACTAAACTTTCATTAT
CAGGTTTGATCGCACTCGTATACGTTTCACTATTTAGTATGCTGATCGGATTTTTCTTTTGGTACTATGGTTTATCAAAG
GGGGGAATTGCTACAGTAGGGCAGTTACAATTACTGCAACCATTATTTGGTCTCTCACTTGCAGCAATCCTGTTGCATGA
ACCGATCAGCTCAACGATGCTGATGATCACAGTGGGTGTGATGATCTGTGTCGCATATGCAAAAAAATTTGCTTAA

Upstream 100 bases:

>100_bases
GGAAATTATGAGCAGTACAGTTTTTTAAAATTGTACTGCATTGTCTCTGTCGTAAAGCACAATATAAGCCTATAAAAATA
AACATCAAGTAAGATGTTAT

Downstream 100 bases:

>100_bases
TGTATTACAAGCAATTTGCAGGTTTGGGAACACCAGCCAATCGACTTAAATGTCTGGCCACCAGACCTGTATTAAATCGC
TGCTGCAATATCGCATTATT

Product: permease (drug/metabolite transporter)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MIMNSKSLAWISGFIGVVIFSGSLPATRIAVMDLDPWFLTGARAVIAGIIAIILLKLFNIQIPKREDRLSLVYVSIGVVI
GFPLFTALALQYMNAASSIVFIGLLPLSTAIFAVICGGEHPQKNFWIFVLIGAGLVILYIFLEASPNTNHILGIFYMLIS
VLVCGLGYAEGGKLARKMGGWQVICWALVLSLPIMLGIMVWNYSNDVITKLSLSGLIALVYVSLFSMLIGFFFWYYGLSK
GGIATVGQLQLLQPLFGLSLAAILLHEPISSTMLMITVGVMICVAYAKKFA

Sequences:

>Translated_291_residues
MIMNSKSLAWISGFIGVVIFSGSLPATRIAVMDLDPWFLTGARAVIAGIIAIILLKLFNIQIPKREDRLSLVYVSIGVVI
GFPLFTALALQYMNAASSIVFIGLLPLSTAIFAVICGGEHPQKNFWIFVLIGAGLVILYIFLEASPNTNHILGIFYMLIS
VLVCGLGYAEGGKLARKMGGWQVICWALVLSLPIMLGIMVWNYSNDVITKLSLSGLIALVYVSLFSMLIGFFFWYYGLSK
GGIATVGQLQLLQPLFGLSLAAILLHEPISSTMLMITVGVMICVAYAKKFA
>Mature_291_residues
MIMNSKSLAWISGFIGVVIFSGSLPATRIAVMDLDPWFLTGARAVIAGIIAIILLKLFNIQIPKREDRLSLVYVSIGVVI
GFPLFTALALQYMNAASSIVFIGLLPLSTAIFAVICGGEHPQKNFWIFVLIGAGLVILYIFLEASPNTNHILGIFYMLIS
VLVCGLGYAEGGKLARKMGGWQVICWALVLSLPIMLGIMVWNYSNDVITKLSLSGLIALVYVSLFSMLIGFFFWYYGLSK
GGIATVGQLQLLQPLFGLSLAAILLHEPISSTMLMITVGVMICVAYAKKFA

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31583; Mature: 31583

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMNSKSLAWISGFIGVVIFSGSLPATRIAVMDLDPWFLTGARAVIAGIIAIILLKLFNI
CCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCC
QIPKREDRLSLVYVSIGVVIGFPLFTALALQYMNAASSIVFIGLLPLSTAIFAVICGGEH
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PQKNFWIFVLIGAGLVILYIFLEASPNTNHILGIFYMLISVLVCGLGYAEGGKLARKMGG
CCCCEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
WQVICWALVLSLPIMLGIMVWNYSNDVITKLSLSGLIALVYVSLFSMLIGFFFWYYGLSK
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GGIATVGQLQLLQPLFGLSLAAILLHEPISSTMLMITVGVMICVAYAKKFA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIMNSKSLAWISGFIGVVIFSGSLPATRIAVMDLDPWFLTGARAVIAGIIAIILLKLFNI
CCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCC
QIPKREDRLSLVYVSIGVVIGFPLFTALALQYMNAASSIVFIGLLPLSTAIFAVICGGEH
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PQKNFWIFVLIGAGLVILYIFLEASPNTNHILGIFYMLISVLVCGLGYAEGGKLARKMGG
CCCCEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
WQVICWALVLSLPIMLGIMVWNYSNDVITKLSLSGLIALVYVSLFSMLIGFFFWYYGLSK
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GGIATVGQLQLLQPLFGLSLAAILLHEPISSTMLMITVGVMICVAYAKKFA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]