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The map label for this gene is yagI [C]

Identifier: 50084969

GI number: 50084969

Start: 1829293

End: 1830072

Strand: Reverse

Name: yagI [C]

Synonym: ACIAD1822

Alternate gene names: 50084969

Gene position: 1830072-1829293 (Counterclockwise)

Preceding gene: 50084977

Following gene: 50084963

Centisome position: 50.85

GC content: 44.36

Gene sequence:

>780_bases
ATGCAATCTTCGCAAGTCAAATCTGCTATGCGAGCACTTGAAATTATGGAATTTTTTCGCGCCGTCAAACAGCCGCGATC
GATGAGTGAAATCTCGATTGCGCTGGGTTATCCACAGTCGAGTACCACTGTGCTTTTAAAAACGTTAATTTCGTTGGGAT
ATCTGAATTTCAATCGCAAAGAGCGTTTGTATTTTCCTACACTCAAGGTCTCAGCGCTCGGCGACTGGATCGCCAACAGC
TTATTTTCTTCACGGGATATTCTGGAAGTTTTGCAGGATATTCACATGGAAACGGGTGAGACTGTAGCGATTGCCACCAA
AAATGATATTTATCTGCAATATATTCAGATCATAGAATCTGTTCATGCACTGCGTTTTCATGTAGATGAAAATGCTATAC
GACCGCTGACAATGTCATCAAATGGTTGGATGCTGATGTCGACCATGAACGACAAAGCCATCGACAATACCGTACGGCGA
GCCAATACAATCACGCAAAAAGATGGTATTCGTTTTGAGGTAGACGATATGATGGCACGGATTCGCCAAGTCCGTGAACA
AGGCTACGCCAGTGCCGAACACATTCCTTTTGTCGGTGGTGGTACCATTTGTGTCTTGCTTCCAATGACCATTCAGGGAC
AGCCTGTAACGATGGGGCTTGGTGGTGCACTTGACAGAATTAAGCAAAATTACGACCGCTATTTAGAACTATTACTCAAT
GGCGTGCAGCAACTCAAAAAGAGCGACAGCTTTCATCAACCAATCGAACTGGCTCACTAA

Upstream 100 bases:

>100_bases
ATATATCGTGTCACGTGATGCTAACCAGAGACAATAAAAATATGGATATGCAAATAAATTTCACAGATGTGATATTTACA
GCTAAAAAGGAGTTAAAGCG

Downstream 100 bases:

>100_bases
AGTACATCAGCATTTCATGCCCATACGCTGATGCGAATGGGCATGAATGAATGGTTAAGGCAATTGCAGTACGGCTTTGG
CCAAAATATTACGCTGGATT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Regulatory Protein IclR; Regulatory Proteins IclR; Transcriptional Regulator Family Protein; Transcriptional Regulator IclR Family; Ranscription Regulator IclR Family.; IclR Helix-Turn-Helix Domain-Containing; Transcription Regulator; IclR Family Transcriptional Regulator Family; IclR Helix-Turn-Helix Domain Family; Transcriptional Regulator IclR

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MQSSQVKSAMRALEIMEFFRAVKQPRSMSEISIALGYPQSSTTVLLKTLISLGYLNFNRKERLYFPTLKVSALGDWIANS
LFSSRDILEVLQDIHMETGETVAIATKNDIYLQYIQIIESVHALRFHVDENAIRPLTMSSNGWMLMSTMNDKAIDNTVRR
ANTITQKDGIRFEVDDMMARIRQVREQGYASAEHIPFVGGGTICVLLPMTIQGQPVTMGLGGALDRIKQNYDRYLELLLN
GVQQLKKSDSFHQPIELAH

Sequences:

>Translated_259_residues
MQSSQVKSAMRALEIMEFFRAVKQPRSMSEISIALGYPQSSTTVLLKTLISLGYLNFNRKERLYFPTLKVSALGDWIANS
LFSSRDILEVLQDIHMETGETVAIATKNDIYLQYIQIIESVHALRFHVDENAIRPLTMSSNGWMLMSTMNDKAIDNTVRR
ANTITQKDGIRFEVDDMMARIRQVREQGYASAEHIPFVGGGTICVLLPMTIQGQPVTMGLGGALDRIKQNYDRYLELLLN
GVQQLKKSDSFHQPIELAH
>Mature_259_residues
MQSSQVKSAMRALEIMEFFRAVKQPRSMSEISIALGYPQSSTTVLLKTLISLGYLNFNRKERLYFPTLKVSALGDWIANS
LFSSRDILEVLQDIHMETGETVAIATKNDIYLQYIQIIESVHALRFHVDENAIRPLTMSSNGWMLMSTMNDKAIDNTVRR
ANTITQKDGIRFEVDDMMARIRQVREQGYASAEHIPFVGGGTICVLLPMTIQGQPVTMGLGGALDRIKQNYDRYLELLLN
GVQQLKKSDSFHQPIELAH

Specific function: Unknown

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29301; Mature: 29301

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSSQVKSAMRALEIMEFFRAVKQPRSMSEISIALGYPQSSTTVLLKTLISLGYLNFNRK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCC
ERLYFPTLKVSALGDWIANSLFSSRDILEVLQDIHMETGETVAIATKNDIYLQYIQIIES
CEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH
VHALRFHVDENAIRPLTMSSNGWMLMSTMNDKAIDNTVRRANTITQKDGIRFEVDDMMAR
HHHHHEEECCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHH
IRQVREQGYASAEHIPFVGGGTICVLLPMTIQGQPVTMGLGGALDRIKQNYDRYLELLLN
HHHHHHHCCCCCCCCCEECCCEEEEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHH
GVQQLKKSDSFHQPIELAH
HHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQSSQVKSAMRALEIMEFFRAVKQPRSMSEISIALGYPQSSTTVLLKTLISLGYLNFNRK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCC
ERLYFPTLKVSALGDWIANSLFSSRDILEVLQDIHMETGETVAIATKNDIYLQYIQIIES
CEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH
VHALRFHVDENAIRPLTMSSNGWMLMSTMNDKAIDNTVRRANTITQKDGIRFEVDDMMAR
HHHHHEEECCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHH
IRQVREQGYASAEHIPFVGGGTICVLLPMTIQGQPVTMGLGGALDRIKQNYDRYLELLLN
HHHHHHHCCCCCCCCCEECCCEEEEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHH
GVQQLKKSDSFHQPIELAH
HHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA