Click here to switch to the map view.

The map label for this gene is mdcA

Identifier: 50084904

GI number: 50084904

Start: 1759599

End: 1761278

Strand: Direct

Name: mdcA

Synonym: ACIAD1753

Alternate gene names: NA

Gene position: 1759599-1761278 (Clockwise)

Preceding gene: 50084899

Following gene: 50084905

Centisome position: 48.9

GC content: 42.74

Gene sequence:

>1680_bases
ATGGAAGGTTCTGTTCAACACAAAGAACGACTATGGACAACACGTCGACAAAGCAAACAACTTAAGCTGGAAATGGCACA
AAAGTATAGCGATGGTGTAGTCATTCCAACTCAAGATATTATTAAAGTTTTAGAAATTTTAATTACCCCAGGTGATCGGG
TAGTACTCGAAGGGAATAATCAAAAACAGGCTGATTTTTTATCGCGCTCATTGGCAAAAACTAATCCAGAAATCCTTCAT
GATCTACATATGATTATGCCAAGTGTTGGACGTCCAGAGCATTTGGATTTATTTGAACATGGTATTGCACGCAAACTCGA
TTTTTCATTTGCAGGTACACAAAGCTTAAGGATTAGTCAACTCTTAGAAGATGGCTTGCTTGAAATAGGCGCAATCCATA
CTTATATCGAATTATATTCTCGTTTACTGGTCGATCTGATCCCGAACGTGGTGTTATCAGCGGGATTTATGGCAGATCGC
CAAGGCAATATTTACACCGGACCAAGTACAGAAGATTCACCTGCACTGATCGAACCAGCAGCATTTAGTGATGGAATCGT
GATCGTTCAAGTGAATGAACTGGTCGATGATGTAACAGATTTACCTCGTGTAGATATACCATCATCTTGGGTCGATTTTG
TGGTTGTCGCAGATCAACCATTTTATATTGAGCCGTTATTTACCCGAGATCCCAAACATATTAAACCTGTGCATGTACTT
ATGGCCATGATGGCGATTCGCGGTATTTATGAAAAGCATCAGGTGCAATCGCTTAATCATGGTATTGGTTTTAATACGGC
TGCCATAGAGCTTATTTTACCGATCTATGGTGAATCATTAGGTTTAAAAGGAAAAATCTGTCGGAACTGGACCTTAAACC
CACATCCTACTTTAATTCCGGCGATCGAAACGGGTTGGGTCGAAAGTGTGCATTGTTTTGGTACAGAGCTCGGAATGGAA
AAGTACATTGCTGCACGCCCTGATGTATTTTTTACTGGACGAGATGGTTCTTTACGCTCCAACCGTATGATGTGTCAGCT
TGCAGGTCAGTATGCGGTTGATTTATTTATTGGTGCAACTTTACAGGTGGATGGTGATGGACATTCTTCTACGGTAACCA
AGGGCCGTTTGGCTGGCTTTGGCGGTGCACCAAATATGGGACATGACCCGCGTGGCCGCCGTCATGCGACACCTGCTTGG
ATGGATATGCGTATTGCAGGCAATACTGAAACAGATACCTACTTGGCAAGGGGCAAAAAACTGGTTGTTCAAATGGTAGA
AACCTATCAGGAAGGTGGCAAGCCAACATTTGTCAAGACTTTAGATGCTGTGGATGTGGCCAAAAAAGCTGGCATGGCTT
TGGCACCCATTATGGTCTATGGCGATGATGTCACACATTTATTAACGGAAGAAGGAATTGCCTATCTTTATAAAGCCAGA
AGTTTAGAAGAACGTCGCGATATGATTGCTGCTGTGGCAGGCGTAACCGATATCGGTCTGAACCATGATCCGAAGAAGAC
ACAAAAATTGCGTCAGGAAGGATTGGTGGTATTTCCAGAAGATTTAGGAATTCGTCGTACAGATGCAACCCGAGAACTTT
TGGCTGCAAAAAATATCGCAGATTTGGTGACATGGTCTGACGGCTTATATCAACCACCAGCAAAATTCAGGAGCTGGTAA

Upstream 100 bases:

>100_bases
ATTAACTTTAAGTTAATGAAAGTGGGTTTTGGTTGATTGATCTAACTTTTAAAAGGGTATTTGATAAGACACAGACCAAA
ATATTCACAAGGAAACGTAC

Downstream 100 bases:

>100_bases
TGAATGCGATTTTAAAAAAGACTCACTTTTCTACAGCCGAATATTTAGCTGATTTGGCCGTTCAAGCGCTGATAGACGAA
GTAAATTTAACACCAAAGCC

Product: malonate decarboxylase, alpha subunit

Products: NA

Alternate protein names: Alpha Subunit Of Malonate Decarboxylase; Malonate Decarboxylase Subunit Alpha; Malonate Decarboxylase Alpha-Subunit; Subunit Alpha Of Malonate Decarboxylase

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MEGSVQHKERLWTTRRQSKQLKLEMAQKYSDGVVIPTQDIIKVLEILITPGDRVVLEGNNQKQADFLSRSLAKTNPEILH
DLHMIMPSVGRPEHLDLFEHGIARKLDFSFAGTQSLRISQLLEDGLLEIGAIHTYIELYSRLLVDLIPNVVLSAGFMADR
QGNIYTGPSTEDSPALIEPAAFSDGIVIVQVNELVDDVTDLPRVDIPSSWVDFVVVADQPFYIEPLFTRDPKHIKPVHVL
MAMMAIRGIYEKHQVQSLNHGIGFNTAAIELILPIYGESLGLKGKICRNWTLNPHPTLIPAIETGWVESVHCFGTELGME
KYIAARPDVFFTGRDGSLRSNRMMCQLAGQYAVDLFIGATLQVDGDGHSSTVTKGRLAGFGGAPNMGHDPRGRRHATPAW
MDMRIAGNTETDTYLARGKKLVVQMVETYQEGGKPTFVKTLDAVDVAKKAGMALAPIMVYGDDVTHLLTEEGIAYLYKAR
SLEERRDMIAAVAGVTDIGLNHDPKKTQKLRQEGLVVFPEDLGIRRTDATRELLAAKNIADLVTWSDGLYQPPAKFRSW

Sequences:

>Translated_559_residues
MEGSVQHKERLWTTRRQSKQLKLEMAQKYSDGVVIPTQDIIKVLEILITPGDRVVLEGNNQKQADFLSRSLAKTNPEILH
DLHMIMPSVGRPEHLDLFEHGIARKLDFSFAGTQSLRISQLLEDGLLEIGAIHTYIELYSRLLVDLIPNVVLSAGFMADR
QGNIYTGPSTEDSPALIEPAAFSDGIVIVQVNELVDDVTDLPRVDIPSSWVDFVVVADQPFYIEPLFTRDPKHIKPVHVL
MAMMAIRGIYEKHQVQSLNHGIGFNTAAIELILPIYGESLGLKGKICRNWTLNPHPTLIPAIETGWVESVHCFGTELGME
KYIAARPDVFFTGRDGSLRSNRMMCQLAGQYAVDLFIGATLQVDGDGHSSTVTKGRLAGFGGAPNMGHDPRGRRHATPAW
MDMRIAGNTETDTYLARGKKLVVQMVETYQEGGKPTFVKTLDAVDVAKKAGMALAPIMVYGDDVTHLLTEEGIAYLYKAR
SLEERRDMIAAVAGVTDIGLNHDPKKTQKLRQEGLVVFPEDLGIRRTDATRELLAAKNIADLVTWSDGLYQPPAKFRSW
>Mature_559_residues
MEGSVQHKERLWTTRRQSKQLKLEMAQKYSDGVVIPTQDIIKVLEILITPGDRVVLEGNNQKQADFLSRSLAKTNPEILH
DLHMIMPSVGRPEHLDLFEHGIARKLDFSFAGTQSLRISQLLEDGLLEIGAIHTYIELYSRLLVDLIPNVVLSAGFMADR
QGNIYTGPSTEDSPALIEPAAFSDGIVIVQVNELVDDVTDLPRVDIPSSWVDFVVVADQPFYIEPLFTRDPKHIKPVHVL
MAMMAIRGIYEKHQVQSLNHGIGFNTAAIELILPIYGESLGLKGKICRNWTLNPHPTLIPAIETGWVESVHCFGTELGME
KYIAARPDVFFTGRDGSLRSNRMMCQLAGQYAVDLFIGATLQVDGDGHSSTVTKGRLAGFGGAPNMGHDPRGRRHATPAW
MDMRIAGNTETDTYLARGKKLVVQMVETYQEGGKPTFVKTLDAVDVAKKAGMALAPIMVYGDDVTHLLTEEGIAYLYKAR
SLEERRDMIAAVAGVTDIGLNHDPKKTQKLRQEGLVVFPEDLGIRRTDATRELLAAKNIADLVTWSDGLYQPPAKFRSW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62028; Mature: 62028

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGSVQHKERLWTTRRQSKQLKLEMAQKYSDGVVIPTQDIIKVLEILITPGDRVVLEGNN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHCCCCCEEEEECCC
QKQADFLSRSLAKTNPEILHDLHMIMPSVGRPEHLDLFEHGIARKLDFSFAGTQSLRISQ
CHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH
LLEDGLLEIGAIHTYIELYSRLLVDLIPNVVLSAGFMADRQGNIYTGPSTEDSPALIEPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCEECCC
AFSDGIVIVQVNELVDDVTDLPRVDIPSSWVDFVVVADQPFYIEPLFTRDPKHIKPVHVL
CCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCHHHHH
MAMMAIRGIYEKHQVQSLNHGIGFNTAAIELILPIYGESLGLKGKICRNWTLNPHPTLIP
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEHHCCCCCCCCCEECCCCCCCCCCEEE
AIETGWVESVHCFGTELGMEKYIAARPDVFFTGRDGSLRSNRMMCQLAGQYAVDLFIGAT
CCCCCCHHHHHHHHHHHCHHHHHHCCCCEEEECCCCCCCCCCHHEEHHCCCEEEEEEEEE
LQVDGDGHSSTVTKGRLAGFGGAPNMGHDPRGRRHATPAWMDMRIAGNTETDTYLARGKK
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH
LVVQMVETYQEGGKPTFVKTLDAVDVAKKAGMALAPIMVYGDDVTHLLTEEGIAYLYKAR
HHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHH
SLEERRDMIAAVAGVTDIGLNHDPKKTQKLRQEGLVVFPEDLGIRRTDATRELLAAKNIA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHH
DLVTWSDGLYQPPAKFRSW
HHHCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MEGSVQHKERLWTTRRQSKQLKLEMAQKYSDGVVIPTQDIIKVLEILITPGDRVVLEGNN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHCCCCCEEEEECCC
QKQADFLSRSLAKTNPEILHDLHMIMPSVGRPEHLDLFEHGIARKLDFSFAGTQSLRISQ
CHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH
LLEDGLLEIGAIHTYIELYSRLLVDLIPNVVLSAGFMADRQGNIYTGPSTEDSPALIEPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCEECCC
AFSDGIVIVQVNELVDDVTDLPRVDIPSSWVDFVVVADQPFYIEPLFTRDPKHIKPVHVL
CCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCHHHHH
MAMMAIRGIYEKHQVQSLNHGIGFNTAAIELILPIYGESLGLKGKICRNWTLNPHPTLIP
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEHHCCCCCCCCCEECCCCCCCCCCEEE
AIETGWVESVHCFGTELGMEKYIAARPDVFFTGRDGSLRSNRMMCQLAGQYAVDLFIGAT
CCCCCCHHHHHHHHHHHCHHHHHHCCCCEEEECCCCCCCCCCHHEEHHCCCEEEEEEEEE
LQVDGDGHSSTVTKGRLAGFGGAPNMGHDPRGRRHATPAWMDMRIAGNTETDTYLARGKK
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH
LVVQMVETYQEGGKPTFVKTLDAVDVAKKAGMALAPIMVYGDDVTHLLTEEGIAYLYKAR
HHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHH
SLEERRDMIAAVAGVTDIGLNHDPKKTQKLRQEGLVVFPEDLGIRRTDATRELLAAKNIA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHH
DLVTWSDGLYQPPAKFRSW
HHHCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA