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The map label for this gene is cioB [H]

Identifier: 50084901

GI number: 50084901

Start: 1756089

End: 1757099

Strand: Reverse

Name: cioB [H]

Synonym: ACIAD1749

Alternate gene names: 50084901

Gene position: 1757099-1756089 (Counterclockwise)

Preceding gene: 50084902

Following gene: 50084900

Centisome position: 48.83

GC content: 39.66

Gene sequence:

>1011_bases
TTGATCATGATTGATTTATCTTTAATCTGGATTGTCATCATTGCTGTAGGTGTATTTATTTATATTGTTCTGGATGGCTT
TGACTTAGGAATTGGTATTTTATTCCCATTTATCAAAGACCAACATGAACGTGATGTCATGATGAATACGGTCGCACCCG
TCTGGGATGGTAATGAAACCTGGATGGTTTTGGGTGGAGCGGGACTGTTTGCAGCTTTTCCCATGGTTTATTCCGCCGTG
TTATCAGCACTTTATTTGCCAATAATTCTTATGGTAATCGCACTGATCTTCCGCGGCGTGGCTTTTGAATTTCGTTTTAA
GGCCAATCGTACCAAACATTTATGGGATGCTGCTTTTATTGGTGGTTCTATAATCTCAAGCTTCTTACAAGGGGTAATTT
TAGGTGCTTATATTCAGGGTATCCATATCGTAGATGGCCGTTATGCAGGCGGTGGTTTAGACTGGCTCACTCCATTTTCA
TTATTTACGGGTGTTGGTGTTGTAGTAGTCTATGCTGCTCTGGGCTGTGGTTGGTTGATTATGAAAACAGATCATCGATT
ACAACTTAATATGTATAGCTTAATGCCTAAACTCATGTATGCATTATTAATCATTTTTGTCTGTGTCAGTATTTATACGC
CGTTATCACAGCCTCAAATTGCTGCACGCTGGTTTACTCAGCCTCAATTGACCTATTTTAGCCCTGTTCCAATTTTAGTG
GTTATATTTACTTTTCTTACAGTTCGGGCATGTAGCAAACGTCAGGAATCTATGCCCTTTCTTTATACATTGGCATTGGT
GTTCCTTGCATATACAGGCTTCTTGATTAGTATTTTCCCCTACATTATTCCACCGTCAGTGACTATTTGGGATGCAGCAG
CTCCCGCCAATAGTCAGCTTTTTGCATTAATTGGCGCGCTAATTCTGATTCCAATTATCATTATGTATACCATCATGGCA
TATTGGGTATTTAGAGATAAAGTTCGTGTGGGTGATGAAGGTTATCACTAG

Upstream 100 bases:

>100_bases
ATAGCCAACCTGAACAAGTCGGTGGTGTTGGACATTTTAAAACCCCAATGCGCCCACTCAGTGCCGCTGATGAGCAAATT
GATGATCAGAATAAAGGAGC

Downstream 100 bases:

>100_bases
GAGCAATTTCAAATGAAGTTATCTAAATTTCAGTGGTTTGTTGTACTCTGGCTTGCTGGTTTCTTCGGGCTTTTGATCAT
TGCGATGGCTTTTAGATTGC

Product: ubiquinol oxidase subunit II, cyanide insensitive

Products: NA

Alternate protein names: Cytochrome bd-I oxidase subunit II; Cytochrome d ubiquinol oxidase subunit II [H]

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MIMIDLSLIWIVIIAVGVFIYIVLDGFDLGIGILFPFIKDQHERDVMMNTVAPVWDGNETWMVLGGAGLFAAFPMVYSAV
LSALYLPIILMVIALIFRGVAFEFRFKANRTKHLWDAAFIGGSIISSFLQGVILGAYIQGIHIVDGRYAGGGLDWLTPFS
LFTGVGVVVVYAALGCGWLIMKTDHRLQLNMYSLMPKLMYALLIIFVCVSIYTPLSQPQIAARWFTQPQLTYFSPVPILV
VIFTFLTVRACSKRQESMPFLYTLALVFLAYTGFLISIFPYIIPPSVTIWDAAAPANSQLFALIGALILIPIIIMYTIMA
YWVFRDKVRVGDEGYH

Sequences:

>Translated_336_residues
MIMIDLSLIWIVIIAVGVFIYIVLDGFDLGIGILFPFIKDQHERDVMMNTVAPVWDGNETWMVLGGAGLFAAFPMVYSAV
LSALYLPIILMVIALIFRGVAFEFRFKANRTKHLWDAAFIGGSIISSFLQGVILGAYIQGIHIVDGRYAGGGLDWLTPFS
LFTGVGVVVVYAALGCGWLIMKTDHRLQLNMYSLMPKLMYALLIIFVCVSIYTPLSQPQIAARWFTQPQLTYFSPVPILV
VIFTFLTVRACSKRQESMPFLYTLALVFLAYTGFLISIFPYIIPPSVTIWDAAAPANSQLFALIGALILIPIIIMYTIMA
YWVFRDKVRVGDEGYH
>Mature_336_residues
MIMIDLSLIWIVIIAVGVFIYIVLDGFDLGIGILFPFIKDQHERDVMMNTVAPVWDGNETWMVLGGAGLFAAFPMVYSAV
LSALYLPIILMVIALIFRGVAFEFRFKANRTKHLWDAAFIGGSIISSFLQGVILGAYIQGIHIVDGRYAGGGLDWLTPFS
LFTGVGVVVVYAALGCGWLIMKTDHRLQLNMYSLMPKLMYALLIIFVCVSIYTPLSQPQIAARWFTQPQLTYFSPVPILV
VIFTFLTVRACSKRQESMPFLYTLALVFLAYTGFLISIFPYIIPPSVTIWDAAAPANSQLFALIGALILIPIIIMYTIMA
YWVFRDKVRVGDEGYH

Specific function: Cytochrome d terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at low aeration [H]

COG id: COG1294

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli AppB [H]

Homologues:

Organism=Escherichia coli, GI1786954, Length=373, Percent_Identity=29.7587131367292, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI1787213, Length=355, Percent_Identity=29.0140845070423, Blast_Score=131, Evalue=6e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003317 [H]

Pfam domain/function: PF02322 Cyto_ox_2 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 37558; Mature: 37558

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMIDLSLIWIVIIAVGVFIYIVLDGFDLGIGILFPFIKDQHERDVMMNTVAPVWDGNET
CEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCE
WMVLGGAGLFAAFPMVYSAVLSALYLPIILMVIALIFRGVAFEFRFKANRTKHLWDAAFI
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCHHHHHHHHH
GGSIISSFLQGVILGAYIQGIHIVDGRYAGGGLDWLTPFSLFTGVGVVVVYAALGCGWLI
HHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
MKTDHRLQLNMYSLMPKLMYALLIIFVCVSIYTPLSQPQIAARWFTQPQLTYFSPVPILV
EECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEECCHHHHH
VIFTFLTVRACSKRQESMPFLYTLALVFLAYTGFLISIFPYIIPPSVTIWDAAAPANSQL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHH
FALIGALILIPIIIMYTIMAYWVFRDKVRVGDEGYH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIMIDLSLIWIVIIAVGVFIYIVLDGFDLGIGILFPFIKDQHERDVMMNTVAPVWDGNET
CEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCE
WMVLGGAGLFAAFPMVYSAVLSALYLPIILMVIALIFRGVAFEFRFKANRTKHLWDAAFI
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCHHHHHHHHH
GGSIISSFLQGVILGAYIQGIHIVDGRYAGGGLDWLTPFSLFTGVGVVVVYAALGCGWLI
HHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
MKTDHRLQLNMYSLMPKLMYALLIIFVCVSIYTPLSQPQIAARWFTQPQLTYFSPVPILV
EECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEECCHHHHH
VIFTFLTVRACSKRQESMPFLYTLALVFLAYTGFLISIFPYIIPPSVTIWDAAAPANSQL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHH
FALIGALILIPIIIMYTIMAYWVFRDKVRVGDEGYH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]