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The map label for this gene is quiX

Identifier: 50084869

GI number: 50084869

Start: 1719660

End: 1720979

Strand: Direct

Name: quiX

Synonym: ACIAD1715

Alternate gene names: 50084869

Gene position: 1719660-1720979 (Clockwise)

Preceding gene: 50084868

Following gene: 50084870

Centisome position: 47.79

GC content: 40.91

Gene sequence:

>1320_bases
ATGCGTCATTTTTTTAAACTAGGTTTAGTGTCAGCGGCAGTTTTGGGCAGTCAAATGACACTAGCCAATGACTTTTGGTC
ACAAGATCGTCAATGGTTACTCGGTGACTGGGGCGGCGAACGTCAGCAGCTAGAAAAGCAGGGCTATAAATTTACAGCGT
CGATTATGAGTCAGGCCGCCACTAATCTTGATGGTGGGTATAACGACAGCAATACGCTTGAAAATGCTGGACAACTGACG
CTGGGTGCAAATTTTGATTTAAGCAAAATCGCAGGTTGGGAAGATACGACAGCAGCCATCATGATCACCAAACGTGATGG
TAACTCTTTGACTCTGGAACGTATTAAAGATCCACGCTCGACTACGCTTGGCAATACCCAGGAAATTTATGGACGTGGAA
AAATCTGGCGTTTAACACAAGCTTGGGTGAAAAAAGGATTCAATGACAATACGGTTCAATTTAAAATTGGTCGTATGGGG
ATGTCAGATGATTTTAATAGCTCACAATGTGAATTCCAGAATTTATTACTCTGTGGTGGACAGCTTGGAAAATCCATTGG
TTCGATCTGGTACAACTGGCCAGTAGGGCTATGGGGTACCAATGTAAAATACCAATTTGCGCCTGAGTGGACTTTAGGTT
TGGGCGTTTATGAAGTCAATCCAGATAACGTCAAAACCCAATCAAATAGTGATGGTTTTAATCTGGATATGAATAATGTC
AAAGGGGCAACCATTCCTGTAGAGTTAGCATGGAAACCTAAACTTGCAATGTTTAATGGTTTGCCAGGTGAATATAAAGT
AGGTGCTTTATACTCTACAGCAGATGCTAATGATGTGGGGACAGTGAGTAAAGTCCATGATAGCAAGCATAGCTTCTGGA
TTAATACTCAACAACAATTGACTCAGCATAATGATAACGCCAAACGTGGTTTATTCGTCAGCTTTAATGGTGTGGTGAAT
GATAAAGCGACTACAATGGTAGAAAGTACCCAGCAATTGGCACTTTGGTATAAAGGCCCTTTTGATAGTCGCCCAAATGA
TTCAATTGGTTTTGGTTTGGCAAACTATGTCGTAAATAAACGAGTACGTGATCGTCAAATTGCAACCAATGAAAGCCGTG
GTTATTATGAATATGATGATTTGGCGTCAAATTATGTTCCAATTCAGCACGATGAACTGAATGTTGAATTGAATTATACC
TATCAATGGTCTCCAGCCGTGATGTTGCGCCCAAATATTCAATATATTCATCAACCTGCTGGTGTGAAAGAGGTTGATGA
TGCATGGGTTGCGGGTTTAAGTATGCGTTTAAATTTCTAA

Upstream 100 bases:

>100_bases
TCAGAGTTAAGTTCTGCAGTGAAAATGAGATAATAAAAATATTCACCAGGATGTTTGCAATTTTATCAATACATTCTGGT
GAAACAATAAGGAATACGAT

Downstream 100 bases:

>100_bases
CAGTATCATCATTTCAATAAAAAATATTGATTAAAATACAAGCAAAGATATTGTTGATTTTAAACTTAATTCGAACAGCT
AAAGTCATTAACATGACTTT

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MRHFFKLGLVSAAVLGSQMTLANDFWSQDRQWLLGDWGGERQQLEKQGYKFTASIMSQAATNLDGGYNDSNTLENAGQLT
LGANFDLSKIAGWEDTTAAIMITKRDGNSLTLERIKDPRSTTLGNTQEIYGRGKIWRLTQAWVKKGFNDNTVQFKIGRMG
MSDDFNSSQCEFQNLLLCGGQLGKSIGSIWYNWPVGLWGTNVKYQFAPEWTLGLGVYEVNPDNVKTQSNSDGFNLDMNNV
KGATIPVELAWKPKLAMFNGLPGEYKVGALYSTADANDVGTVSKVHDSKHSFWINTQQQLTQHNDNAKRGLFVSFNGVVN
DKATTMVESTQQLALWYKGPFDSRPNDSIGFGLANYVVNKRVRDRQIATNESRGYYEYDDLASNYVPIQHDELNVELNYT
YQWSPAVMLRPNIQYIHQPAGVKEVDDAWVAGLSMRLNF

Sequences:

>Translated_439_residues
MRHFFKLGLVSAAVLGSQMTLANDFWSQDRQWLLGDWGGERQQLEKQGYKFTASIMSQAATNLDGGYNDSNTLENAGQLT
LGANFDLSKIAGWEDTTAAIMITKRDGNSLTLERIKDPRSTTLGNTQEIYGRGKIWRLTQAWVKKGFNDNTVQFKIGRMG
MSDDFNSSQCEFQNLLLCGGQLGKSIGSIWYNWPVGLWGTNVKYQFAPEWTLGLGVYEVNPDNVKTQSNSDGFNLDMNNV
KGATIPVELAWKPKLAMFNGLPGEYKVGALYSTADANDVGTVSKVHDSKHSFWINTQQQLTQHNDNAKRGLFVSFNGVVN
DKATTMVESTQQLALWYKGPFDSRPNDSIGFGLANYVVNKRVRDRQIATNESRGYYEYDDLASNYVPIQHDELNVELNYT
YQWSPAVMLRPNIQYIHQPAGVKEVDDAWVAGLSMRLNF
>Mature_439_residues
MRHFFKLGLVSAAVLGSQMTLANDFWSQDRQWLLGDWGGERQQLEKQGYKFTASIMSQAATNLDGGYNDSNTLENAGQLT
LGANFDLSKIAGWEDTTAAIMITKRDGNSLTLERIKDPRSTTLGNTQEIYGRGKIWRLTQAWVKKGFNDNTVQFKIGRMG
MSDDFNSSQCEFQNLLLCGGQLGKSIGSIWYNWPVGLWGTNVKYQFAPEWTLGLGVYEVNPDNVKTQSNSDGFNLDMNNV
KGATIPVELAWKPKLAMFNGLPGEYKVGALYSTADANDVGTVSKVHDSKHSFWINTQQQLTQHNDNAKRGLFVSFNGVVN
DKATTMVESTQQLALWYKGPFDSRPNDSIGFGLANYVVNKRVRDRQIATNESRGYYEYDDLASNYVPIQHDELNVELNYT
YQWSPAVMLRPNIQYIHQPAGVKEVDDAWVAGLSMRLNF

Specific function: Could be involved in the transport of quinate or shikimate

COG id: COG3659

COG function: function code M; Carbohydrate-selective porin

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oprB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): QUIX_ACIAD (Q43923)

Other databases:

- EMBL:   L05770
- EMBL:   CR543861
- PIR:   I39524
- RefSeq:   YP_046379.1
- STRING:   Q43923
- GeneID:   2879470
- GenomeReviews:   CR543861_GR
- KEGG:   aci:ACIAD1715
- NMPDR:   fig|62977.3.peg.1641
- eggNOG:   COG3659
- HOGENOM:   HBG640334
- OMA:   QFAPEWT
- ProtClustDB:   CLSK707363
- BioCyc:   ASP62977:ACIAD1715-MONOMER
- InterPro:   IPR007049

Pfam domain/function: PF04966 OprB

EC number: NA

Molecular weight: Translated: 49310; Mature: 49310

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHFFKLGLVSAAVLGSQMTLANDFWSQDRQWLLGDWGGERQQLEKQGYKFTASIMSQAA
CCHHHHHHHHHHHHHCCCEEEHHHHHCCCCCEEEECCCCHHHHHHHCCCEEEHHHHHHHH
TNLDGGYNDSNTLENAGQLTLGANFDLSKIAGWEDTTAAIMITKRDGNSLTLERIKDPRS
HCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCEEEEEEEECCCCEEEHHHCCCCCC
TTLGNTQEIYGRGKIWRLTQAWVKKGFNDNTVQFKIGRMGMSDDFNSSQCEFQNLLLCGG
CCCCCCHHHHCCCCEEEEHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHEEECH
QLGKSIGSIWYNWPVGLWGTNVKYQFAPEWTLGLGVYEVNPDNVKTQSNSDGFNLDMNNV
HHHHHHHCEEEECCCCEECCCEEEEECCCEEEEEEEEEECCCCEEECCCCCCCEEECCCC
KGATIPVELAWKPKLAMFNGLPGEYKVGALYSTADANDVGTVSKVHDSKHSFWINTQQQL
CCCEEEEEEECCCCCHHCCCCCCCEEEEEEEECCCCCCCCCHHHHCCCCCEEEECCHHHH
TQHNDNAKRGLFVSFNGVVNDKATTMVESTQQLALWYKGPFDSRPNDSIGFGLANYVVNK
HHCCCCCCCCEEEEECCEECCCHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHC
RVRDRQIATNESRGYYEYDDLASNYVPIQHDELNVELNYTYQWSPAVMLRPNIQYIHQPA
CHHCCCCCCCCCCCEEEHHHHCCCCCCEECCCEEEEEEEEEEECCEEEECCCHHEEECCC
GVKEVDDAWVAGLSMRLNF
CCCHHCHHHHCCEEEEECC
>Mature Secondary Structure
MRHFFKLGLVSAAVLGSQMTLANDFWSQDRQWLLGDWGGERQQLEKQGYKFTASIMSQAA
CCHHHHHHHHHHHHHCCCEEEHHHHHCCCCCEEEECCCCHHHHHHHCCCEEEHHHHHHHH
TNLDGGYNDSNTLENAGQLTLGANFDLSKIAGWEDTTAAIMITKRDGNSLTLERIKDPRS
HCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCEEEEEEEECCCCEEEHHHCCCCCC
TTLGNTQEIYGRGKIWRLTQAWVKKGFNDNTVQFKIGRMGMSDDFNSSQCEFQNLLLCGG
CCCCCCHHHHCCCCEEEEHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHEEECH
QLGKSIGSIWYNWPVGLWGTNVKYQFAPEWTLGLGVYEVNPDNVKTQSNSDGFNLDMNNV
HHHHHHHCEEEECCCCEECCCEEEEECCCEEEEEEEEEECCCCEEECCCCCCCEEECCCC
KGATIPVELAWKPKLAMFNGLPGEYKVGALYSTADANDVGTVSKVHDSKHSFWINTQQQL
CCCEEEEEEECCCCCHHCCCCCCCEEEEEEEECCCCCCCCCHHHHCCCCCEEEECCHHHH
TQHNDNAKRGLFVSFNGVVNDKATTMVESTQQLALWYKGPFDSRPNDSIGFGLANYVVNK
HHCCCCCCCCEEEEECCEECCCHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHC
RVRDRQIATNESRGYYEYDDLASNYVPIQHDELNVELNYTYQWSPAVMLRPNIQYIHQPA
CHHCCCCCCCCCCCEEEHHHHCCCCCCEECCCEEEEEEEEEEECCEEEECCCHHEEECCC
GVKEVDDAWVAGLSMRLNF
CCCHHCHHHHCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7592351