Click here to switch to the map view.

The map label for this gene is yxaC [H]

Identifier: 50084830

GI number: 50084830

Start: 1679602

End: 1680294

Strand: Reverse

Name: yxaC [H]

Synonym: ACIAD1673

Alternate gene names: 50084830

Gene position: 1680294-1679602 (Counterclockwise)

Preceding gene: 50084831

Following gene: 50084826

Centisome position: 46.69

GC content: 38.96

Gene sequence:

>693_bases
ATGAATATTGCATTATTGTGGTTATTCGGAACGCTTATGGGTTATGTTATCGCCAAACCTATTTACCGTCGTTTACCGTA
TTTACCTTTTTCACCCGCTATTTTAGTTCCTGTCATTATTATTGCAATTCTTCTCACTTTTAATATTCCTTATGACGTTT
ATATGCAGGATAACCAGTGGATTGTATGGATGCTCGGTCCAACCACTGTAGCATTTGCAATCCCAATTTATGAATATCGC
AATATTATTAAAGCGCATGCTATTACCATTTCTGTTGGTATTTTAGTTGGAATGACTGCAGGAATGATCAGTGCATTTTA
TCTAGCTCGTTTATTTCATTTTGACCAACCAACCACACTAAGCCTCATGGCGCGTTCAATTTCTACCCCTTTTGCAATCG
CCTTAACCGAACATATCGATGGATCAGTGCAATTGGTGATTTTATTCACCATGATCACAGGCATTGTCGGAATGATGTTT
GGTGATTTAGTACTCGCAGGCTTAAAGCTTAAATCTTATTTGGCCAATGGTGCATCTTTGGGGAGTGCAGCACACGGGTT
TGGAACAAGCAAAGCCTATCAACGAGGCAAAGATGAAGGTGTTATTGCCAGCTTAACAATGGTTCTTGCAGGCATCTTTA
TGGTGATTGTAGGTCCCTTTTTGGTACACATTATTTTTAAGCTTCTTGCTTAA

Upstream 100 bases:

>100_bases
TGGTGTTTACTGCCTATAGTGTTCATATATGTTTTAAGCTAGAAGCATGGCTTAAACGACATCATAGATCTGGCCATCAA
CAACGATCTGGAGTGAAATC

Downstream 100 bases:

>100_bases
TTTATGATGAGTTTGCTTAGTCAAGATAAATCTCCTCAAATAAAATTGAGAAGATAGCTTAAATAAGCCAGACTCATCGT
AGTGAAATCAACAAACTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MNIALLWLFGTLMGYVIAKPIYRRLPYLPFSPAILVPVIIIAILLTFNIPYDVYMQDNQWIVWMLGPTTVAFAIPIYEYR
NIIKAHAITISVGILVGMTAGMISAFYLARLFHFDQPTTLSLMARSISTPFAIALTEHIDGSVQLVILFTMITGIVGMMF
GDLVLAGLKLKSYLANGASLGSAAHGFGTSKAYQRGKDEGVIASLTMVLAGIFMVIVGPFLVHIIFKLLA

Sequences:

>Translated_230_residues
MNIALLWLFGTLMGYVIAKPIYRRLPYLPFSPAILVPVIIIAILLTFNIPYDVYMQDNQWIVWMLGPTTVAFAIPIYEYR
NIIKAHAITISVGILVGMTAGMISAFYLARLFHFDQPTTLSLMARSISTPFAIALTEHIDGSVQLVILFTMITGIVGMMF
GDLVLAGLKLKSYLANGASLGSAAHGFGTSKAYQRGKDEGVIASLTMVLAGIFMVIVGPFLVHIIFKLLA
>Mature_230_residues
MNIALLWLFGTLMGYVIAKPIYRRLPYLPFSPAILVPVIIIAILLTFNIPYDVYMQDNQWIVWMLGPTTVAFAIPIYEYR
NIIKAHAITISVGILVGMTAGMISAFYLARLFHFDQPTTLSLMARSISTPFAIALTEHIDGSVQLVILFTMITGIVGMMF
GDLVLAGLKLKSYLANGASLGSAAHGFGTSKAYQRGKDEGVIASLTMVLAGIFMVIVGPFLVHIIFKLLA

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=219, Percent_Identity=28.310502283105, Blast_Score=104, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 25149; Mature: 25149

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIALLWLFGTLMGYVIAKPIYRRLPYLPFSPAILVPVIIIAILLTFNIPYDVYMQDNQW
CCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCE
IVWMLGPTTVAFAIPIYEYRNIIKAHAITISVGILVGMTAGMISAFYLARLFHFDQPTTL
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
SLMARSISTPFAIALTEHIDGSVQLVILFTMITGIVGMMFGDLVLAGLKLKSYLANGASL
HHHHHHHCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GSAAHGFGTSKAYQRGKDEGVIASLTMVLAGIFMVIVGPFLVHIIFKLLA
CCHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNIALLWLFGTLMGYVIAKPIYRRLPYLPFSPAILVPVIIIAILLTFNIPYDVYMQDNQW
CCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCE
IVWMLGPTTVAFAIPIYEYRNIIKAHAITISVGILVGMTAGMISAFYLARLFHFDQPTTL
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
SLMARSISTPFAIALTEHIDGSVQLVILFTMITGIVGMMFGDLVLAGLKLKSYLANGASL
HHHHHHHCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GSAAHGFGTSKAYQRGKDEGVIASLTMVLAGIFMVIVGPFLVHIIFKLLA
CCHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377; 10568751 [H]