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The map label for this gene is oruR [H]

Identifier: 50084771

GI number: 50084771

Start: 1607107

End: 1608150

Strand: Reverse

Name: oruR [H]

Synonym: ACIAD1610

Alternate gene names: 50084771

Gene position: 1608150-1607107 (Counterclockwise)

Preceding gene: 50084775

Following gene: 50084764

Centisome position: 44.69

GC content: 35.73

Gene sequence:

>1044_bases
ATGGATTTATTATCCCATTCCAATAAAGGGACAATTTCAATTGCTCTGGTTAATGAGGCTTTGCAGGGAGCTTATACGAC
AGGCTTGGATGTCGAAAAAATTGTGAAAGCTGTAGGGATTTCGCCCGAACTGCTGGCATTTCCCAAAGCTCGTGTCACTA
TTGATCAATATGCCCGCCTTTGGATTGAATTAGCCGACGTTTTGAATGATGAGTTTTTTGCAATGGACTCTCATCCCATG
CGCAGAGGAAGTTACCGATTACTGGCCAAACTTGCCATGCAATCAGAAACTTTAGAAAAAGCCTTACAAGATATTCTTCA
CTATTTTTCGAATATTCTGGATGATATTCATCCGCAACTTAAAATAGACAATCATCAGGCTTATATTGTTTTACAGGATC
GTCAGCACCCTAAACGCATGTTTGTTTACGCAACACTGATTATGTTAATTCATGGTTTATTATGCTGGTTATCTGATCAA
AGAATTAGTATTGATCATATTAAAATAAAATCTGTCAAACCTATCTACCCTCAAGATTATTACATTCGTTTTTGTGAAAA
AATTGAATTTTCTTCAGATGAGAATCTGATCGCGATTAATTCAGCATGTTTAAAATTAAAAATCAAAAAAAATAAAAATG
ATCTGATTAATTTTTTAAAACATACCCCTCATAATTTGTTAGTTCGCTACAAAAATGAAGATGCACTTGGTCTTCTCATT
AGAAGGCACCTTATTCGTCATCATCCTTCAGAATGGCCAGAGTTAAAGCAACTTTCCCATGAATTACACATGTCGGAAGC
AACCCTTCAACGACGTCTCAAAGCTGAAAATATGAGCTATCAAGCTTTAAAAAATGAAATTCGTTGCGATATTGCGATTG
AGCAATTGATTAATACCAAACATACTTTAAATGAAATCAGTGAAGCACTGGATTTTCATGATCCAAGTGCTTTCCATAGA
GCATTTAAAAAGTGGATGGGAATGAGTCCAAGTGCATATAGAAAAGCATATTTCCAGCACAAAATTCCGCCTGTCTCTGC
ATAA

Upstream 100 bases:

>100_bases
TTGTTTTGATTAAAGTACAATTTCAAATGGTTTCAATTGCTTTGAAGGTTGTAAAAAAGCATTCTAATCAAAGTAAAAAT
TAAAGGATTAAGGTTGTAAT

Downstream 100 bases:

>100_bases
AAGCATATTTAGAACTAGCGGAATAGCAGCAAGAAATCTCTTACGCTTGCCAGTAAGTCAGTCTGAAATGACTAACCTAA
TTGGCCTAATATATTATCTA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MDLLSHSNKGTISIALVNEALQGAYTTGLDVEKIVKAVGISPELLAFPKARVTIDQYARLWIELADVLNDEFFAMDSHPM
RRGSYRLLAKLAMQSETLEKALQDILHYFSNILDDIHPQLKIDNHQAYIVLQDRQHPKRMFVYATLIMLIHGLLCWLSDQ
RISIDHIKIKSVKPIYPQDYYIRFCEKIEFSSDENLIAINSACLKLKIKKNKNDLINFLKHTPHNLLVRYKNEDALGLLI
RRHLIRHHPSEWPELKQLSHELHMSEATLQRRLKAENMSYQALKNEIRCDIAIEQLINTKHTLNEISEALDFHDPSAFHR
AFKKWMGMSPSAYRKAYFQHKIPPVSA

Sequences:

>Translated_347_residues
MDLLSHSNKGTISIALVNEALQGAYTTGLDVEKIVKAVGISPELLAFPKARVTIDQYARLWIELADVLNDEFFAMDSHPM
RRGSYRLLAKLAMQSETLEKALQDILHYFSNILDDIHPQLKIDNHQAYIVLQDRQHPKRMFVYATLIMLIHGLLCWLSDQ
RISIDHIKIKSVKPIYPQDYYIRFCEKIEFSSDENLIAINSACLKLKIKKNKNDLINFLKHTPHNLLVRYKNEDALGLLI
RRHLIRHHPSEWPELKQLSHELHMSEATLQRRLKAENMSYQALKNEIRCDIAIEQLINTKHTLNEISEALDFHDPSAFHR
AFKKWMGMSPSAYRKAYFQHKIPPVSA
>Mature_347_residues
MDLLSHSNKGTISIALVNEALQGAYTTGLDVEKIVKAVGISPELLAFPKARVTIDQYARLWIELADVLNDEFFAMDSHPM
RRGSYRLLAKLAMQSETLEKALQDILHYFSNILDDIHPQLKIDNHQAYIVLQDRQHPKRMFVYATLIMLIHGLLCWLSDQ
RISIDHIKIKSVKPIYPQDYYIRFCEKIEFSSDENLIAINSACLKLKIKKNKNDLINFLKHTPHNLLVRYKNEDALGLLI
RRHLIRHHPSEWPELKQLSHELHMSEATLQRRLKAENMSYQALKNEIRCDIAIEQLINTKHTLNEISEALDFHDPSAFHR
AFKKWMGMSPSAYRKAYFQHKIPPVSA

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 40324; Mature: 40324

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLSHSNKGTISIALVNEALQGAYTTGLDVEKIVKAVGISPELLAFPKARVTIDQYARL
CCCCCCCCCCEEEEEEEHHHHHCHHCCCCCHHHHHHHHCCCHHHHCCCCHHEEHHHHHHH
WIELADVLNDEFFAMDSHPMRRGSYRLLAKLAMQSETLEKALQDILHYFSNILDDIHPQL
HHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
KIDNHQAYIVLQDRQHPKRMFVYATLIMLIHGLLCWLSDQRISIDHIKIKSVKPIYPQDY
EECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHH
YIRFCEKIEFSSDENLIAINSACLKLKIKKNKNDLINFLKHTPHNLLVRYKNEDALGLLI
HHHHHHHHCCCCCCCEEEEECEEEEEEEECCHHHHHHHHHHCCCCEEEEECCCCHHHHHH
RRHLIRHHPSEWPELKQLSHELHMSEATLQRRLKAENMSYQALKNEIRCDIAIEQLINTK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHH
HTLNEISEALDFHDPSAFHRAFKKWMGMSPSAYRKAYFQHKIPPVSA
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDLLSHSNKGTISIALVNEALQGAYTTGLDVEKIVKAVGISPELLAFPKARVTIDQYARL
CCCCCCCCCCEEEEEEEHHHHHCHHCCCCCHHHHHHHHCCCHHHHCCCCHHEEHHHHHHH
WIELADVLNDEFFAMDSHPMRRGSYRLLAKLAMQSETLEKALQDILHYFSNILDDIHPQL
HHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
KIDNHQAYIVLQDRQHPKRMFVYATLIMLIHGLLCWLSDQRISIDHIKIKSVKPIYPQDY
EECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHH
YIRFCEKIEFSSDENLIAINSACLKLKIKKNKNDLINFLKHTPHNLLVRYKNEDALGLLI
HHHHHHHHCCCCCCCEEEEECEEEEEEEECCHHHHHHHHHHCCCCEEEEECCCCHHHHHH
RRHLIRHHPSEWPELKQLSHELHMSEATLQRRLKAENMSYQALKNEIRCDIAIEQLINTK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHH
HTLNEISEALDFHDPSAFHRAFKKWMGMSPSAYRKAYFQHKIPPVSA
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]