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The map label for this gene is 50084718

Identifier: 50084718

GI number: 50084718

Start: 1551417

End: 1552193

Strand: Direct

Name: 50084718

Synonym: ACIAD1556

Alternate gene names: NA

Gene position: 1551417-1552193 (Clockwise)

Preceding gene: 50084717

Following gene: 50084719

Centisome position: 43.11

GC content: 42.47

Gene sequence:

>777_bases
ATGGCAGCTTTAAAACATCCTTTGGTTGAAGATCGCATCATTGAAGGGCAAGGTACATCTAGAGAACAATGGTTACATGC
ATTTTTTCAACAGCCCCTCTCACCACTGAATCTTGAAAAATTTCACTCGAAACGAATTGTGATTGTGGCACCGCATCCAG
ATGATGAAATACTCGGTTGTGGCGGCTTGATGCAACAGTTGATTAATTTGAATTGTCATTTATTGATTATTGCCGTCAGC
AATGGTACCCAAAGCCATCCGAATTCAAGCAAATATAGTCCAGAACAATTAAATCAAATTCGTCCACAAGAAAGTCTAGC
GGCATTACATTGTTTAGAGGTTTCAGATTTTGCTCAACGAATTGCCTTAAATTTACCAGATGGACAGATTCATTTGCAGA
CAGAGCAACTTTGGCAAGCATTAGACGCGCTGGTTCAAGCAGAGGATATTCTGATTTGTAGCTATGCGCAGGATGGACAT
CCCGATCATGAAGCGGTAGGAAAAACGGTACAAGCCTTTGCTTTAGCGCATGATCTAGCATATTTACAGGTGCTGATCTG
GGCATGGCATTGGGCGCGGCCGTTAGATCCGCGTATCAACTGGCAACAGGCCAGAGCTTATAGCTTGACGCAAACGCAAT
TAATCAAAAAACGTCAGGCCATTATGCAGTTCAAAAGTCAGATCGAAGCTGATGAGAGTACAGGAAATGCTGCGGTTTTA
TCTGCAGCAATTATCGAACGTTTATTGATGCCTTGGGAGGTTTATCTTTGTGAATGA

Upstream 100 bases:

>100_bases
TTGCCAGTCTAATGGCAGATTTACCAGTATTTATTCGGCAAAGTCATGCGGCATTTGATGATGAGCAAATTGCTGAGCGA
TGTTTACAGGAGCAAGTGTC

Downstream 100 bases:

>100_bases
TTCTAGTCAATATTTCGAAGATTTATATCATACCAATAATGACCCTTGGGGCTATGATCATCATTGGTATGAGGCTCGTA
AAAGGCAGATTTGTTTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: LmbE-Like Protein; LmbE Protein; N-Acetylglucosaminylphosphatidylinositol Deacetylase; Gpi Deacetylase; GlcNAc-PI De-N-Acetylase Family Protein; GlcNAc-PI De-N-Acetylase; Acyl-CoA Dehydrogenase/Methyltransferase

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MAALKHPLVEDRIIEGQGTSREQWLHAFFQQPLSPLNLEKFHSKRIVIVAPHPDDEILGCGGLMQQLINLNCHLLIIAVS
NGTQSHPNSSKYSPEQLNQIRPQESLAALHCLEVSDFAQRIALNLPDGQIHLQTEQLWQALDALVQAEDILICSYAQDGH
PDHEAVGKTVQAFALAHDLAYLQVLIWAWHWARPLDPRINWQQARAYSLTQTQLIKKRQAIMQFKSQIEADESTGNAAVL
SAAIIERLLMPWEVYLCE

Sequences:

>Translated_258_residues
MAALKHPLVEDRIIEGQGTSREQWLHAFFQQPLSPLNLEKFHSKRIVIVAPHPDDEILGCGGLMQQLINLNCHLLIIAVS
NGTQSHPNSSKYSPEQLNQIRPQESLAALHCLEVSDFAQRIALNLPDGQIHLQTEQLWQALDALVQAEDILICSYAQDGH
PDHEAVGKTVQAFALAHDLAYLQVLIWAWHWARPLDPRINWQQARAYSLTQTQLIKKRQAIMQFKSQIEADESTGNAAVL
SAAIIERLLMPWEVYLCE
>Mature_257_residues
AALKHPLVEDRIIEGQGTSREQWLHAFFQQPLSPLNLEKFHSKRIVIVAPHPDDEILGCGGLMQQLINLNCHLLIIAVSN
GTQSHPNSSKYSPEQLNQIRPQESLAALHCLEVSDFAQRIALNLPDGQIHLQTEQLWQALDALVQAEDILICSYAQDGHP
DHEAVGKTVQAFALAHDLAYLQVLIWAWHWARPLDPRINWQQARAYSLTQTQLIKKRQAIMQFKSQIEADESTGNAAVLS
AAIIERLLMPWEVYLCE

Specific function: Unknown

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29138; Mature: 29006

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALKHPLVEDRIIEGQGTSREQWLHAFFQQPLSPLNLEKFHSKRIVIVAPHPDDEILGC
CCCCCCCCHHCEEECCCCCCHHHHHHHHHHCCCCCCCHHHHCCCEEEEEECCCCCCEECC
GGLMQQLINLNCHLLIIAVSNGTQSHPNSSKYSPEQLNQIRPQESLAALHCLEVSDFAQR
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH
IALNLPDGQIHLQTEQLWQALDALVQAEDILICSYAQDGHPDHEAVGKTVQAFALAHDLA
HEECCCCCEEEEEHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
YLQVLIWAWHWARPLDPRINWQQARAYSLTQTQLIKKRQAIMQFKSQIEADESTGNAAVL
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
SAAIIERLLMPWEVYLCE
HHHHHHHHHCCCEEEEEC
>Mature Secondary Structure 
AALKHPLVEDRIIEGQGTSREQWLHAFFQQPLSPLNLEKFHSKRIVIVAPHPDDEILGC
CCCCCCCHHCEEECCCCCCHHHHHHHHHHCCCCCCCHHHHCCCEEEEEECCCCCCEECC
GGLMQQLINLNCHLLIIAVSNGTQSHPNSSKYSPEQLNQIRPQESLAALHCLEVSDFAQR
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH
IALNLPDGQIHLQTEQLWQALDALVQAEDILICSYAQDGHPDHEAVGKTVQAFALAHDLA
HEECCCCCEEEEEHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
YLQVLIWAWHWARPLDPRINWQQARAYSLTQTQLIKKRQAIMQFKSQIEADESTGNAAVL
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
SAAIIERLLMPWEVYLCE
HHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA