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The map label for this gene is tonB2 [H]

Identifier: 50084694

GI number: 50084694

Start: 1527439

End: 1528266

Strand: Direct

Name: tonB2 [H]

Synonym: ACIAD1528

Alternate gene names: 50084694

Gene position: 1527439-1528266 (Clockwise)

Preceding gene: 50084693

Following gene: 50084695

Centisome position: 42.45

GC content: 43.6

Gene sequence:

>828_bases
ATGCGTGATCAAATCTTTAATCCCCATAAGCGGGCTTTGCTCTTTGAGCAATTTGTGACAGGTGCAACTACACCTGAAAT
TGCAGATCCGTTTACACGGCATGAACAAGAAGCTATTCAACCTGCTCCAGTGAAGTCGAATAAAGTCTTAATCGCAATTA
TTGCGGTTGTTTCAGCACATCTTGGAATTTGGTATGTCGCAAAACAATTACCGACACCCGCTTTAGATATTCATAAACCC
GAACCTGTGGTGATTGAAATCGTAAAACCCGTTGAACCACCTAAAGTGATTGAACCCAAAATTCCACCGATTACTGAAAA
ACCCAAAGTTCCACCTGTCGTGGAAAAGCCTAAGCCAATTCCCAAACAGGTTGAACAGCCCAAACCTGTCCAAAAAAGTG
TGGAACAACCTAAGCCAGTTGCAAAAGCGGTGGCTGAACCAACTCCACAAAAGGTTGCAGAGCCTGTGGCCACAAAAGAA
GTAGTCGCAGAACCAGTTAAAAAAGTAGCTGAGCCTGTAAAAGCGTCAGATGACAATTTACCTGTGACTGAAGCCAAAGG
TTATGCCGGATATCTCAGTAACCCTGCACCTGAATACCCTGAACAAGCTTTAGAACGTGGTTGGGAAGGCTCAGTGATTT
TACGGGTCAAGGTATTAGCAAATGGCAGTCCAGATACAGTCAGTGTCAAGCAAAGTAGTGGAAAAAAACTTCTAGACAGT
GCTGCCGTAAGAACAGTAAAGCAATGGAAATTTTCACCTGCGCTGAAAGGGAAAACCCCTGTAGAAGGCTGGGTCGATGT
TCCAATTCATTATCAATTACCGAAATAA

Upstream 100 bases:

>100_bases
CTGAAAGATGTGAGTTAAATCTATAAAAAATAATAGCTTACTATTTTGGCATAGCTTGTGCAATTTCTCAGTCAATATTT
TATTTTTAGTTTAAGTTCCT

Downstream 100 bases:

>100_bases
AATTTAAATTAAGAGGATATTTTCATGTCAGATATTAATTCATTGATCCACGACGGCACGATCTGGTTGTTGGTTGCTTT
CTCAATTGTGACTTGGGTGT

Product: tonB-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MRDQIFNPHKRALLFEQFVTGATTPEIADPFTRHEQEAIQPAPVKSNKVLIAIIAVVSAHLGIWYVAKQLPTPALDIHKP
EPVVIEIVKPVEPPKVIEPKIPPITEKPKVPPVVEKPKPIPKQVEQPKPVQKSVEQPKPVAKAVAEPTPQKVAEPVATKE
VVAEPVKKVAEPVKASDDNLPVTEAKGYAGYLSNPAPEYPEQALERGWEGSVILRVKVLANGSPDTVSVKQSSGKKLLDS
AAVRTVKQWKFSPALKGKTPVEGWVDVPIHYQLPK

Sequences:

>Translated_275_residues
MRDQIFNPHKRALLFEQFVTGATTPEIADPFTRHEQEAIQPAPVKSNKVLIAIIAVVSAHLGIWYVAKQLPTPALDIHKP
EPVVIEIVKPVEPPKVIEPKIPPITEKPKVPPVVEKPKPIPKQVEQPKPVQKSVEQPKPVAKAVAEPTPQKVAEPVATKE
VVAEPVKKVAEPVKASDDNLPVTEAKGYAGYLSNPAPEYPEQALERGWEGSVILRVKVLANGSPDTVSVKQSSGKKLLDS
AAVRTVKQWKFSPALKGKTPVEGWVDVPIHYQLPK
>Mature_275_residues
MRDQIFNPHKRALLFEQFVTGATTPEIADPFTRHEQEAIQPAPVKSNKVLIAIIAVVSAHLGIWYVAKQLPTPALDIHKP
EPVVIEIVKPVEPPKVIEPKIPPITEKPKVPPVVEKPKPIPKQVEQPKPVQKSVEQPKPVAKAVAEPTPQKVAEPVATKE
VVAEPVKKVAEPVKASDDNLPVTEAKGYAGYLSNPAPEYPEQALERGWEGSVILRVKVLANGSPDTVSVKQSSGKKLLDS
AAVRTVKQWKFSPALKGKTPVEGWVDVPIHYQLPK

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 30065; Mature: 30065

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDQIFNPHKRALLFEQFVTGATTPEIADPFTRHEQEAIQPAPVKSNKVLIAIIAVVSAH
CCCCCCCHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
LGIWYVAKQLPTPALDIHKPEPVVIEIVKPVEPPKVIEPKIPPITEKPKVPPVVEKPKPI
HHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PKQVEQPKPVQKSVEQPKPVAKAVAEPTPQKVAEPVATKEVVAEPVKKVAEPVKASDDNL
CHHCCCCCHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PVTEAKGYAGYLSNPAPEYPEQALERGWEGSVILRVKVLANGSPDTVSVKQSSGKKLLDS
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEECCCCHHHHHH
AAVRTVKQWKFSPALKGKTPVEGWVDVPIHYQLPK
HHHHHHHHHCCCCCCCCCCCCCCEEECCEEEECCC
>Mature Secondary Structure
MRDQIFNPHKRALLFEQFVTGATTPEIADPFTRHEQEAIQPAPVKSNKVLIAIIAVVSAH
CCCCCCCHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
LGIWYVAKQLPTPALDIHKPEPVVIEIVKPVEPPKVIEPKIPPITEKPKVPPVVEKPKPI
HHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PKQVEQPKPVQKSVEQPKPVAKAVAEPTPQKVAEPVATKEVVAEPVKKVAEPVKASDDNL
CHHCCCCCHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PVTEAKGYAGYLSNPAPEYPEQALERGWEGSVILRVKVLANGSPDTVSVKQSSGKKLLDS
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEECCCCHHHHHH
AAVRTVKQWKFSPALKGKTPVEGWVDVPIHYQLPK
HHHHHHHHHCCCCCCCCCCCCCCEEECCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10689178; 10984043 [H]