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The map label for this gene is ssuC [H]

Identifier: 50084690

GI number: 50084690

Start: 1523095

End: 1523883

Strand: Reverse

Name: ssuC [H]

Synonym: ACIAD1524

Alternate gene names: 50084690

Gene position: 1523883-1523095 (Counterclockwise)

Preceding gene: 50084691

Following gene: 50084689

Centisome position: 42.35

GC content: 38.4

Gene sequence:

>789_bases
ATGTCTCAGCGTAGATTTACTTTAAAACAATCATGGCAACGGCCAATCATTTTAGTTCAAGGCCTGATACTGCCATTATT
GTTATTAGGCATATGGCAATACAGCTCGGGCTTAGGTGCTAGTCATGCCTATGCATTTGTTCCTTTACAAAACATTTATT
TCGCATTAGTTAGATTGCTTGAAACAGGTGAATTATGGCTAAACACATGGGGGAGTCTTAAAAAAGCTGGAATAGGATTC
ATCTTAGGTTCAATAAGCGGTTTAATTTTGGGTTCTTTGCTTGCCTATTCGAAAGTTTTAAATGCTTTAGTTTCTCCACT
ATTTAACAGTATTCGACAAGTTCCGTTACTGGGTTTAACACCTTTAATTGCCTTATGGTTTGGTAATGGAGAAGAAGCCA
AAATTTTTATTATCGCGCTTGCTTCGTTTTTTCCATTAGTAATTAATACATATCAGGGTCTTAGCCACAACGATGCAAAA
TACGACGAAATCGCACGTATTTATCAATTTTCATTTTGGCGAAAATTTAAAAAAATACGCCTTCCCCAAGCCCTACCCCA
TATTTTAACGGGTCTAAATTTAGCCATACCCTTTACTTGGATCACCACTACAGCAAGTGAGTTGCTATTCAATGCGGGTG
CGGGACTCGGTAACTTAATGATGAAAGCCGAGATTAATGCCGAAATGGATATTTTGTTGGTTTGCGCCATTACGGTTACC
CTTTGTGGGGCGTTTATGACAGCAAGTATTCATCTTATTTCAAAACGCCTACTGCTATGGCGTACCTAA

Upstream 100 bases:

>100_bases
GTGTGTTTATCACAGGCGTCGTCGGGTTTGGTTTAGATAAAGTTTTACGCTTAGTGGAACAACGCTTTATCTCACCTGCG
CTTATTTCGGGGGAAAAATA

Downstream 100 bases:

>100_bases
TTTGTCTTTTTTAAAAATATTGATAGGATTTTATATGTCATTCTCACTACTTTCTATTAGAAAACTTACTAAATCTTTTG
AGCGTGATCAAAATACTTTG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSQRRFTLKQSWQRPIILVQGLILPLLLLGIWQYSSGLGASHAYAFVPLQNIYFALVRLLETGELWLNTWGSLKKAGIGF
ILGSISGLILGSLLAYSKVLNALVSPLFNSIRQVPLLGLTPLIALWFGNGEEAKIFIIALASFFPLVINTYQGLSHNDAK
YDEIARIYQFSFWRKFKKIRLPQALPHILTGLNLAIPFTWITTTASELLFNAGAGLGNLMMKAEINAEMDILLVCAITVT
LCGAFMTASIHLISKRLLLWRT

Sequences:

>Translated_262_residues
MSQRRFTLKQSWQRPIILVQGLILPLLLLGIWQYSSGLGASHAYAFVPLQNIYFALVRLLETGELWLNTWGSLKKAGIGF
ILGSISGLILGSLLAYSKVLNALVSPLFNSIRQVPLLGLTPLIALWFGNGEEAKIFIIALASFFPLVINTYQGLSHNDAK
YDEIARIYQFSFWRKFKKIRLPQALPHILTGLNLAIPFTWITTTASELLFNAGAGLGNLMMKAEINAEMDILLVCAITVT
LCGAFMTASIHLISKRLLLWRT
>Mature_261_residues
SQRRFTLKQSWQRPIILVQGLILPLLLLGIWQYSSGLGASHAYAFVPLQNIYFALVRLLETGELWLNTWGSLKKAGIGFI
LGSISGLILGSLLAYSKVLNALVSPLFNSIRQVPLLGLTPLIALWFGNGEEAKIFIIALASFFPLVINTYQGLSHNDAKY
DEIARIYQFSFWRKFKKIRLPQALPHILTGLNLAIPFTWITTTASELLFNAGAGLGNLMMKAEINAEMDILLVCAITVTL
CGAFMTASIHLISKRLLLWRT

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=237, Percent_Identity=34.5991561181435, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1786564, Length=197, Percent_Identity=27.4111675126904, Blast_Score=74, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29151; Mature: 29020

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQRRFTLKQSWQRPIILVQGLILPLLLLGIWQYSSGLGASHAYAFVPLQNIYFALVRLL
CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHH
ETGELWLNTWGSLKKAGIGFILGSISGLILGSLLAYSKVLNALVSPLFNSIRQVPLLGLT
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
PLIALWFGNGEEAKIFIIALASFFPLVINTYQGLSHNDAKYDEIARIYQFSFWRKFKKIR
HHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
LPQALPHILTGLNLAIPFTWITTTASELLFNAGAGLGNLMMKAEINAEMDILLVCAITVT
CHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHCCCCHHHHHEEEECCCCHHHHHHHHHHHH
LCGAFMTASIHLISKRLLLWRT
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQRRFTLKQSWQRPIILVQGLILPLLLLGIWQYSSGLGASHAYAFVPLQNIYFALVRLL
CCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHH
ETGELWLNTWGSLKKAGIGFILGSISGLILGSLLAYSKVLNALVSPLFNSIRQVPLLGLT
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
PLIALWFGNGEEAKIFIIALASFFPLVINTYQGLSHNDAKYDEIARIYQFSFWRKFKKIR
HHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
LPQALPHILTGLNLAIPFTWITTTASELLFNAGAGLGNLMMKAEINAEMDILLVCAITVT
CHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHCCCCHHHHHEEEECCCCHHHHHHHHHHHH
LCGAFMTASIHLISKRLLLWRT
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8011666; 9782504; 9384377 [H]