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The map label for this gene is yliD [C]

Identifier: 50084676

GI number: 50084676

Start: 1504977

End: 1505825

Strand: Direct

Name: yliD [C]

Synonym: ACIAD1508

Alternate gene names: 50084676

Gene position: 1504977-1505825 (Clockwise)

Preceding gene: 50084675

Following gene: 50084677

Centisome position: 41.82

GC content: 41.46

Gene sequence:

>849_bases
ATGAGCTCACTTCATTGGTATCAAAGAAACTTTTTTCAAACATTAATCCGTGAAAGACAAGTACGTTTTGGCTTTGTAGT
TACAACTCTAGTTTTGATTTTTGCACTGGTTGGACAATTCTTAGTTCCCTTTGAGCCCACTGCATTGGTCGGCTTGACTT
ATGGACCACCTGAAGAAAAATCATTTTTAGGTTATGACTATATTGGTCATGATGTTTGGTCACGTGTACTTGCTGGCGGT
GCTTCAATTATCTGGATGACACTGGCTGCCAGTTTGGTCGCATTAGTGATTGGTTCTAGTTTGGGCATACTCGCTGCTTT
TGCCCGAAATAAGATTGATCAGTTCGTAACTTGGCTGACTGATGTTTTTATGGCCTTTCCTGATCTTATTTTGGTCTTAC
TTATTGTTTCGATGTTAGGTCGACAGCCTTGGCTCATTGTTTTAACAGTTTCAATTGCTTTTATTCCTGGAGTTGTACGT
CTTGCACGAAGCGTTGCACTTAACCTAGTGGAACAGGAATATATCGAAGCTGCCCGAATTCTTGGTTATTCAAAAACTTA
TATTCTATTCCGTGAAATTTTACCCAATATGTTGACACCATTACTCATTCATCTTGGTGTGATGCTGACATGGGCAGTGG
GGATGTTATCAGGTTTGGCTTTTCTGGGTTATGGCGTGGCACCTCCAGCAGCAGATTGGGGGCTCATGATTAATGAAAAT
CGCGCTGGTTTATTAGTTCAACCATGGGCCGTATTTACTCCTGTCATTTTAATTGCTTTGTTTGCACTTGGAACCAATGT
ATTGGCAGAGGGCGTTGGACGTGCAGCAGCTCGGATTGAGGAAAAATAA

Upstream 100 bases:

>100_bases
GCCGTCAGGCATTACGTTTATGGAAATCTGGCCGACCAATTACGGTAAAACCTGTCGATCGTCGCAATGCTCTAAAGAAT
ATTCAGCAAGGAGGTGGGAA

Downstream 100 bases:

>100_bases
ATATGGCAAATACATTTAAAAAAAGCGTATTGACCGTAACAGACTTAACCGTAGCATTGGTAAACACCGGTAATTATATC
GTTTCTAATATTTCATTTAA

Product: peptide ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MSSLHWYQRNFFQTLIRERQVRFGFVVTTLVLIFALVGQFLVPFEPTALVGLTYGPPEEKSFLGYDYIGHDVWSRVLAGG
ASIIWMTLAASLVALVIGSSLGILAAFARNKIDQFVTWLTDVFMAFPDLILVLLIVSMLGRQPWLIVLTVSIAFIPGVVR
LARSVALNLVEQEYIEAARILGYSKTYILFREILPNMLTPLLIHLGVMLTWAVGMLSGLAFLGYGVAPPAADWGLMINEN
RAGLLVQPWAVFTPVILIALFALGTNVLAEGVGRAAARIEEK

Sequences:

>Translated_282_residues
MSSLHWYQRNFFQTLIRERQVRFGFVVTTLVLIFALVGQFLVPFEPTALVGLTYGPPEEKSFLGYDYIGHDVWSRVLAGG
ASIIWMTLAASLVALVIGSSLGILAAFARNKIDQFVTWLTDVFMAFPDLILVLLIVSMLGRQPWLIVLTVSIAFIPGVVR
LARSVALNLVEQEYIEAARILGYSKTYILFREILPNMLTPLLIHLGVMLTWAVGMLSGLAFLGYGVAPPAADWGLMINEN
RAGLLVQPWAVFTPVILIALFALGTNVLAEGVGRAAARIEEK
>Mature_281_residues
SSLHWYQRNFFQTLIRERQVRFGFVVTTLVLIFALVGQFLVPFEPTALVGLTYGPPEEKSFLGYDYIGHDVWSRVLAGGA
SIIWMTLAASLVALVIGSSLGILAAFARNKIDQFVTWLTDVFMAFPDLILVLLIVSMLGRQPWLIVLTVSIAFIPGVVRL
ARSVALNLVEQEYIEAARILGYSKTYILFREILPNMLTPLLIHLGVMLTWAVGMLSGLAFLGYGVAPPAADWGLMINENR
AGLLVQPWAVFTPVILIALFALGTNVLAEGVGRAAARIEEK

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=273, Percent_Identity=29.3040293040293, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1787760, Length=249, Percent_Identity=31.7269076305221, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1787549, Length=218, Percent_Identity=31.1926605504587, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1789889, Length=268, Percent_Identity=26.4925373134328, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1789964, Length=274, Percent_Identity=26.6423357664234, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787498, Length=266, Percent_Identity=26.3157894736842, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1788505, Length=208, Percent_Identity=29.3269230769231, Blast_Score=78, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31066; Mature: 30935

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSLHWYQRNFFQTLIRERQVRFGFVVTTLVLIFALVGQFLVPFEPTALVGLTYGPPEEK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
SFLGYDYIGHDVWSRVLAGGASIIWMTLAASLVALVIGSSLGILAAFARNKIDQFVTWLT
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
DVFMAFPDLILVLLIVSMLGRQPWLIVLTVSIAFIPGVVRLARSVALNLVEQEYIEAARI
HHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGYSKTYILFREILPNMLTPLLIHLGVMLTWAVGMLSGLAFLGYGVAPPAADWGLMINEN
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC
RAGLLVQPWAVFTPVILIALFALGTNVLAEGVGRAAARIEEK
CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA