| Definition | Acinetobacter sp. ADP1 chromosome, complete genome. |
|---|---|
| Accession | NC_005966 |
| Length | 3,598,621 |
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The map label for this gene is gsiB [H]
Identifier: 50084674
GI number: 50084674
Start: 1502249
End: 1503823
Strand: Direct
Name: gsiB [H]
Synonym: ACIAD1506
Alternate gene names: 50084674
Gene position: 1502249-1503823 (Clockwise)
Preceding gene: 50084673
Following gene: 50084675
Centisome position: 41.75
GC content: 40.63
Gene sequence:
>1575_bases ATGAATAAAATTACCCGTAGGGAACTCATTAAACAAACTGGATTAGGTGTTGGTGCTTTTGCTGCAATCAGCCTCACAGG ATGTTCTAAACCTGATTCTTCATCCTCTGAAAGTACTACTGCCGCTATAACCCAAAGTGATACGCCGAAAAAAGGCGGTG TGATCAAAATTGGAGTGATCAATGGTAACCAAGCAGGTAATCTCGACGCGCATAAACCAATTGGTATGTCTAGTGCGTTT AGAGGTTGGCCTTTGTACGCGAAGTTATGGGAATGGGGTAGAGATATTCAGCCAAAACTTGCTCTTGCTGAATTTGCTGA ACCCAATGATGATGGGACGAAATGGACTATTCGTCTAAAAAAAGGGCTTGAGTTTCATCATGGTAAAACCATTTCAGCTG ATGATATCATTTTCTCTTTAAGACGGTTAACTGACCCCAAACTTGCCTCACCATTTGCAGCTTATCTTTATTCTTTACAA AGAGATGCAATTAAAAAGCGTGATGAATACACTGTTGAAATTCCTTTTTCTCAGGGAAAGGGATTGGTTGCTTTACCAGA AGCGTGGATGAGCTGGGGTGGTATTGTTCCTACAGATTATGATCCAGTTAAAAATGTAGTTGGAGCTGGCCCATTTAAGC TTGAAAGTTTTACACCTGGTCAGCGTTCACGTTTTATTCGTTTTGAAAATTACTGGAAAGAAAATCAACCTTATGCAGAT GCAATAGAAATTATTGATTTTAAGGATCAGACAGGGCGCCTTGCTGCTTTGCAATCCGGCCAAATTGATATTGCCTCTGG CGTAAGTGCTGAGCATATTGCTCTAATTCAGTCTAATAAACGGCTAAATCTAGTTTCATCGGAAACCGATGCTTGGCAAT CATTTGATATGAATACGTCTAAAGCACCGTTCAATGATGCTCGGGTACGACAAGCTTTTAGATTAATTGCTAATAGAGAC GATTTAGTTAAAAGGGCTTTAGCTGGACAAGGAAGAGTCGCAAATGATCTTTATTCATTTAGCGATCCTGTATATGACCA CAATATCGCTCAACGAAAGCAAGATTTGAATAAAGCCAAGCATTTGCTTAAAGAAGCTGGTTTTAATAACAGTTTAAAGG TCGATTTATATACAGGGCCAGATAGCAATGCCGCATTAGTTTTTGCTCAACATGCTGCTCAGGCAGGTGTCATTGTTAAT GTTAAACAGGTTGAAGCTGCTACTTTTGCGGATGCTGTAAAACAAGATTGGGCATTTAGTACAGGCTCGAACGTTTCACG TCCTTTCTTATTAACAGTTTTGCAAATTGATGGGCCGGGTGCGGCAAATAATAAAACTCGATTTAAGAATGAGCGTTTTA CCGAACTAGTGCATGCGGCATTGCAACAACCCGATTTAGAAAAACGAAAAGTTCTGGTTCACGAAGCACAGCATATTCAA CATGAGCAAGGTGGTTTACTCATTTGGGGGTTTAATAATGTCCTTGATGCACATTCGAACCAAATTGGTGGTGTAACACC TGATCGCACTGGTTTCGCTGCATGGCGTACAGATGAATTCTGGCGCAGAGGGTAA
Upstream 100 bases:
>100_bases TTATTGGAGCTTAATCATGGTTTTGAGTTGCCTAAGCTAAATAGAAATTCATCTATTGATTCCCACTTGAATCAAGAAGT CGTGGTTTAAGGGAGAAGGT
Downstream 100 bases:
>100_bases CCGATATGACAATTCAATCCAGCAAAATAGAAGCATCCATTCAACAACCAGCAATTACCAAGTCATTTGAATTTCCTGCA TGGTTACCTTGGTTTTTGAC
Product: peptide ABC transporter periplasmic substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 524; Mature: 524
Protein sequence:
>524_residues MNKITRRELIKQTGLGVGAFAAISLTGCSKPDSSSSESTTAAITQSDTPKKGGVIKIGVINGNQAGNLDAHKPIGMSSAF RGWPLYAKLWEWGRDIQPKLALAEFAEPNDDGTKWTIRLKKGLEFHHGKTISADDIIFSLRRLTDPKLASPFAAYLYSLQ RDAIKKRDEYTVEIPFSQGKGLVALPEAWMSWGGIVPTDYDPVKNVVGAGPFKLESFTPGQRSRFIRFENYWKENQPYAD AIEIIDFKDQTGRLAALQSGQIDIASGVSAEHIALIQSNKRLNLVSSETDAWQSFDMNTSKAPFNDARVRQAFRLIANRD DLVKRALAGQGRVANDLYSFSDPVYDHNIAQRKQDLNKAKHLLKEAGFNNSLKVDLYTGPDSNAALVFAQHAAQAGVIVN VKQVEAATFADAVKQDWAFSTGSNVSRPFLLTVLQIDGPGAANNKTRFKNERFTELVHAALQQPDLEKRKVLVHEAQHIQ HEQGGLLIWGFNNVLDAHSNQIGGVTPDRTGFAAWRTDEFWRRG
Sequences:
>Translated_524_residues MNKITRRELIKQTGLGVGAFAAISLTGCSKPDSSSSESTTAAITQSDTPKKGGVIKIGVINGNQAGNLDAHKPIGMSSAF RGWPLYAKLWEWGRDIQPKLALAEFAEPNDDGTKWTIRLKKGLEFHHGKTISADDIIFSLRRLTDPKLASPFAAYLYSLQ RDAIKKRDEYTVEIPFSQGKGLVALPEAWMSWGGIVPTDYDPVKNVVGAGPFKLESFTPGQRSRFIRFENYWKENQPYAD AIEIIDFKDQTGRLAALQSGQIDIASGVSAEHIALIQSNKRLNLVSSETDAWQSFDMNTSKAPFNDARVRQAFRLIANRD DLVKRALAGQGRVANDLYSFSDPVYDHNIAQRKQDLNKAKHLLKEAGFNNSLKVDLYTGPDSNAALVFAQHAAQAGVIVN VKQVEAATFADAVKQDWAFSTGSNVSRPFLLTVLQIDGPGAANNKTRFKNERFTELVHAALQQPDLEKRKVLVHEAQHIQ HEQGGLLIWGFNNVLDAHSNQIGGVTPDRTGFAAWRTDEFWRRG >Mature_524_residues MNKITRRELIKQTGLGVGAFAAISLTGCSKPDSSSSESTTAAITQSDTPKKGGVIKIGVINGNQAGNLDAHKPIGMSSAF RGWPLYAKLWEWGRDIQPKLALAEFAEPNDDGTKWTIRLKKGLEFHHGKTISADDIIFSLRRLTDPKLASPFAAYLYSLQ RDAIKKRDEYTVEIPFSQGKGLVALPEAWMSWGGIVPTDYDPVKNVVGAGPFKLESFTPGQRSRFIRFENYWKENQPYAD AIEIIDFKDQTGRLAALQSGQIDIASGVSAEHIALIQSNKRLNLVSSETDAWQSFDMNTSKAPFNDARVRQAFRLIANRD DLVKRALAGQGRVANDLYSFSDPVYDHNIAQRKQDLNKAKHLLKEAGFNNSLKVDLYTGPDSNAALVFAQHAAQAGVIVN VKQVEAATFADAVKQDWAFSTGSNVSRPFLLTVLQIDGPGAANNKTRFKNERFTELVHAALQQPDLEKRKVLVHEAQHIQ HEQGGLLIWGFNNVLDAHSNQIGGVTPDRTGFAAWRTDEFWRRG
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: COG0747
COG function: function code E; ABC-type dipeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=463, Percent_Identity=26.9978401727862, Blast_Score=129, Evalue=6e-31, Organism=Escherichia coli, GI1789966, Length=473, Percent_Identity=25.5813953488372, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI1787495, Length=467, Percent_Identity=25.6959314775161, Blast_Score=102, Evalue=8e-23, Organism=Escherichia coli, GI1789397, Length=456, Percent_Identity=22.8070175438596, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1787551, Length=520, Percent_Identity=22.5, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1787762, Length=418, Percent_Identity=23.2057416267943, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1789887, Length=276, Percent_Identity=26.0869565217391, Blast_Score=83, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 57975; Mature: 57975
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKITRRELIKQTGLGVGAFAAISLTGCSKPDSSSSESTTAAITQSDTPKKGGVIKIGVI CCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEE NGNQAGNLDAHKPIGMSSAFRGWPLYAKLWEWGRDIQPKLALAEFAEPNDDGTKWTIRLK ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCEEEEEEE KGLEFHHGKTISADDIIFSLRRLTDPKLASPFAAYLYSLQRDAIKKRDEYTVEIPFSQGK CCCEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCC GLVALPEAWMSWGGIVPTDYDPVKNVVGAGPFKLESFTPGQRSRFIRFENYWKENQPYAD CEEEECHHHHHCCCCCCCCCHHHHHHHCCCCEEECCCCCCCHHCEEEEHHHCCCCCCHHH AIEIIDFKDQTGRLAALQSGQIDIASGVSAEHIALIQSNKRLNLVSSETDAWQSFDMNTS HEEEEECCCCCCCEEEECCCCEEEECCCCCCEEEEEECCCEEEEEECCCCHHHHCCCCCC KAPFNDARVRQAFRLIANRDDLVKRALAGQGRVANDLYSFSDPVYDHNIAQRKQDLNKAK CCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH HLLKEAGFNNSLKVDLYTGPDSNAALVFAQHAAQAGVIVNVKQVEAATFADAVKQDWAFS HHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHCCCCC TGSNVSRPFLLTVLQIDGPGAANNKTRFKNERFTELVHAALQQPDLEKRKVLVHEAQHIQ CCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH HEQGGLLIWGFNNVLDAHSNQIGGVTPDRTGFAAWRTDEFWRRG HCCCCEEEEECHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHCC >Mature Secondary Structure MNKITRRELIKQTGLGVGAFAAISLTGCSKPDSSSSESTTAAITQSDTPKKGGVIKIGVI CCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEE NGNQAGNLDAHKPIGMSSAFRGWPLYAKLWEWGRDIQPKLALAEFAEPNDDGTKWTIRLK ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCEEEEEEE KGLEFHHGKTISADDIIFSLRRLTDPKLASPFAAYLYSLQRDAIKKRDEYTVEIPFSQGK CCCEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCC GLVALPEAWMSWGGIVPTDYDPVKNVVGAGPFKLESFTPGQRSRFIRFENYWKENQPYAD CEEEECHHHHHCCCCCCCCCHHHHHHHCCCCEEECCCCCCCHHCEEEEHHHCCCCCCHHH AIEIIDFKDQTGRLAALQSGQIDIASGVSAEHIALIQSNKRLNLVSSETDAWQSFDMNTS HEEEEECCCCCCCEEEECCCCEEEECCCCCCEEEEEECCCEEEEEECCCCHHHHCCCCCC KAPFNDARVRQAFRLIANRDDLVKRALAGQGRVANDLYSFSDPVYDHNIAQRKQDLNKAK CCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH HLLKEAGFNNSLKVDLYTGPDSNAALVFAQHAAQAGVIVNVKQVEAATFADAVKQDWAFS HHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHCCCCC TGSNVSRPFLLTVLQIDGPGAANNKTRFKNERFTELVHAALQQPDLEKRKVLVHEAQHIQ CCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH HEQGGLLIWGFNNVLDAHSNQIGGVTPDRTGFAAWRTDEFWRRG HCCCCEEEEECHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA