Click here to switch to the map view.

The map label for this gene is 50084666

Identifier: 50084666

GI number: 50084666

Start: 1493584

End: 1494306

Strand: Reverse

Name: 50084666

Synonym: ACIAD1496

Alternate gene names: NA

Gene position: 1494306-1493584 (Counterclockwise)

Preceding gene: 50084667

Following gene: 50084665

Centisome position: 41.52

GC content: 38.59

Gene sequence:

>723_bases
ATGTCTCAGTTTTTGAAGGGTGTTCTTGCAATAAGTATCATCCCGATAATGATGGTTGGCTGTACCACTGCTCCTCAAAA
AAAAGGAAAAATCTTAGACTTACCAAAGGGACATCGTATTCATATTCCTCAGGAAACTGTGACTATAGAACGTCCTGTTC
GCCCTAAAGTAACACCAAACTCTTATTTGAATTGGCTGCAAAATCCGTCTAATCGGATACAAATACAAGAATATGAGCAA
TTTTTATCACGAAACGATGTAGCAAATATTGTTCCAAATTACGAATTATTGAAAACAGCTCGCGATTGGCAAAAATGTGG
ACGATCCGAATATGCGGTTCCCAATAGAGAGCTTTGGAATAATGCCATTCCTACATTACGTGTGCTCAAATATTTAGTGG
CAGCAAAAATTTTGACTGATTTTGAGGTGACATCTGTTTATCGTGATTTACCATTAAATCAGTGTGCTGGTGGCGCGAAT
TCTTCCCGGCATTTGTTTAATTCGGCTATCGATTTTCGTATTGGTCCCGAAATTCCTCAACCGCAAGATTATGCTTTTAT
TGAAAATACCAAATTTAAGCTTTGCCAATTTTGGAATCAACATGGACAAAGTCTGAATATGGGACTAGGTCTGTACAGTT
CAGGTCAAATTCATATTGACACTCAAGGCTATCGTACATGGGGGCCAGACCATAGCCGAAACAGTTCAATGTGTAATTAC
TGA

Upstream 100 bases:

>100_bases
TTTTTTATACTTTAAATCAACATTTGATTGCAAAATTTTCAAAATTTGTTCTTCATTTTGCACTAAAATAACGAGCTTAG
AATAAGTTGTTGATTTTATT

Downstream 100 bases:

>100_bases
AAACTTTAAGTATATCTGATCAATTAAATGTTAATTATTTAACGTCGATACTTTATTTGTTTTTAAAAACTTTTTCCTTT
CGTTTTGAAATCTCATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MSQFLKGVLAISIIPIMMVGCTTAPQKKGKILDLPKGHRIHIPQETVTIERPVRPKVTPNSYLNWLQNPSNRIQIQEYEQ
FLSRNDVANIVPNYELLKTARDWQKCGRSEYAVPNRELWNNAIPTLRVLKYLVAAKILTDFEVTSVYRDLPLNQCAGGAN
SSRHLFNSAIDFRIGPEIPQPQDYAFIENTKFKLCQFWNQHGQSLNMGLGLYSSGQIHIDTQGYRTWGPDHSRNSSMCNY

Sequences:

>Translated_240_residues
MSQFLKGVLAISIIPIMMVGCTTAPQKKGKILDLPKGHRIHIPQETVTIERPVRPKVTPNSYLNWLQNPSNRIQIQEYEQ
FLSRNDVANIVPNYELLKTARDWQKCGRSEYAVPNRELWNNAIPTLRVLKYLVAAKILTDFEVTSVYRDLPLNQCAGGAN
SSRHLFNSAIDFRIGPEIPQPQDYAFIENTKFKLCQFWNQHGQSLNMGLGLYSSGQIHIDTQGYRTWGPDHSRNSSMCNY
>Mature_239_residues
SQFLKGVLAISIIPIMMVGCTTAPQKKGKILDLPKGHRIHIPQETVTIERPVRPKVTPNSYLNWLQNPSNRIQIQEYEQF
LSRNDVANIVPNYELLKTARDWQKCGRSEYAVPNRELWNNAIPTLRVLKYLVAAKILTDFEVTSVYRDLPLNQCAGGANS
SRHLFNSAIDFRIGPEIPQPQDYAFIENTKFKLCQFWNQHGQSLNMGLGLYSSGQIHIDTQGYRTWGPDHSRNSSMCNY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27437; Mature: 27306

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQFLKGVLAISIIPIMMVGCTTAPQKKGKILDLPKGHRIHIPQETVTIERPVRPKVTPN
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEECCCHHEEECCCCCCCCCHH
SYLNWLQNPSNRIQIQEYEQFLSRNDVANIVPNYELLKTARDWQKCGRSEYAVPNRELWN
HHHHHHCCCCCCEEHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHH
NAIPTLRVLKYLVAAKILTDFEVTSVYRDLPLNQCAGGANSSRHLFNSAIDFRIGPEIPQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHCEEECCCCCC
PQDYAFIENTKFKLCQFWNQHGQSLNMGLGLYSSGQIHIDTQGYRTWGPDHSRNSSMCNY
CCCCEEEECCHHHHHHHHHHCCCEEECCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SQFLKGVLAISIIPIMMVGCTTAPQKKGKILDLPKGHRIHIPQETVTIERPVRPKVTPN
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEECCCHHEEECCCCCCCCCHH
SYLNWLQNPSNRIQIQEYEQFLSRNDVANIVPNYELLKTARDWQKCGRSEYAVPNRELWN
HHHHHHCCCCCCEEHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHH
NAIPTLRVLKYLVAAKILTDFEVTSVYRDLPLNQCAGGANSSRHLFNSAIDFRIGPEIPQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHCEEECCCCCC
PQDYAFIENTKFKLCQFWNQHGQSLNMGLGLYSSGQIHIDTQGYRTWGPDHSRNSSMCNY
CCCCEEEECCHHHHHHHHHHCCCEEECCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA