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The map label for this gene is yneE [C]

Identifier: 50084636

GI number: 50084636

Start: 1460803

End: 1461711

Strand: Reverse

Name: yneE [C]

Synonym: ACIAD1461

Alternate gene names: 50084636

Gene position: 1461711-1460803 (Counterclockwise)

Preceding gene: 50084637

Following gene: 50084632

Centisome position: 40.62

GC content: 40.26

Gene sequence:

>909_bases
ATGATTATTCGAAATAAAGCCAATAGTTTTCGTTTGTTATTTGCTTGGAAAGGCACAATCTTGCCGCAGGTGTTACCCGC
CCTTGTGATTGTCATGCTAATTTCAGCAATGTTTGGACTGCTGAATAGCTGGCATTTTTTGAATATTCCCACCGTTCCTA
GCATCGGATTTACAATTTTTGGTGTCATTTTATCTATTTTTATTGGTTTTCGAAATTCTTCTTGTTACGACCGCTGGTGG
GAAGGACGCAAGCTCTGGGGAGCACTGATCGCAACATCCCGTCATATTGCGCGTGATAGTCATATTTTAAATCCTTTGCA
TCGTGAACGACTTTTGCACCAGACCATGGTATTTAGTAATGTTCTGAGGGATCGACTCAGACATCAAACCACACATCCGC
ATCATTTTTTAGATCATGGTTATCAAGATGATGATATTGCTTATTTTAACCAGCATATCAATACGCCTCAGCACATTTTG
GAAGACATGCAAAAAGATTTACTCACAAGCCTTCAGTCAGGCGAAATCAGCGACATAATTTATAGTATTTTAAGCCAGCA
TATTGTTTCTCTGGGCAATATTCAGGCGGGATGTGATCGTATTGCAAGCACGCCCTTACCGTATGCTTATTCTGTTTTAT
TGCACCGGGCAGTTTATTGCTTCTGCTTCATTTTGCCATTTAGTCTGGAAAATATTTTGGGGATCTGGACACCCCTTATG
GTTGGTTTGATTGCTTATATGTTTTTAGGTCTGGATGCCTTAAGTGGTCAGCTTGAAGAGCCCTTTGGTTTACAGGAAAA
TGATCTCCCTTTAGATTCGATTGTACGTTTAATTGAACGCGAGTTACTTCATTCCTTGGGTAAAGAATTGCCACCAGTGA
TTCAGGCCAATGGCGACAATTTACTTTAA

Upstream 100 bases:

>100_bases
CAATTTAAAACAGCTAAATTCCTTTATTCTCAACTACTCCCATATTGATTTTAAATTGGTTAGACTAAGCCTGTTTTAAT
CAAAATCACGATGCCTTCCC

Downstream 100 bases:

>100_bases
CTTACGGATATAGACTTAAATATCAATGTTCGGGTAACAGATTTCTGGTCTAGAACATCCAACTGAATGACAATGTTGCT
TTGAGTGGTTCACCAGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MIIRNKANSFRLLFAWKGTILPQVLPALVIVMLISAMFGLLNSWHFLNIPTVPSIGFTIFGVILSIFIGFRNSSCYDRWW
EGRKLWGALIATSRHIARDSHILNPLHRERLLHQTMVFSNVLRDRLRHQTTHPHHFLDHGYQDDDIAYFNQHINTPQHIL
EDMQKDLLTSLQSGEISDIIYSILSQHIVSLGNIQAGCDRIASTPLPYAYSVLLHRAVYCFCFILPFSLENILGIWTPLM
VGLIAYMFLGLDALSGQLEEPFGLQENDLPLDSIVRLIERELLHSLGKELPPVIQANGDNLL

Sequences:

>Translated_302_residues
MIIRNKANSFRLLFAWKGTILPQVLPALVIVMLISAMFGLLNSWHFLNIPTVPSIGFTIFGVILSIFIGFRNSSCYDRWW
EGRKLWGALIATSRHIARDSHILNPLHRERLLHQTMVFSNVLRDRLRHQTTHPHHFLDHGYQDDDIAYFNQHINTPQHIL
EDMQKDLLTSLQSGEISDIIYSILSQHIVSLGNIQAGCDRIASTPLPYAYSVLLHRAVYCFCFILPFSLENILGIWTPLM
VGLIAYMFLGLDALSGQLEEPFGLQENDLPLDSIVRLIERELLHSLGKELPPVIQANGDNLL
>Mature_302_residues
MIIRNKANSFRLLFAWKGTILPQVLPALVIVMLISAMFGLLNSWHFLNIPTVPSIGFTIFGVILSIFIGFRNSSCYDRWW
EGRKLWGALIATSRHIARDSHILNPLHRERLLHQTMVFSNVLRDRLRHQTTHPHHFLDHGYQDDDIAYFNQHINTPQHIL
EDMQKDLLTSLQSGEISDIIYSILSQHIVSLGNIQAGCDRIASTPLPYAYSVLLHRAVYCFCFILPFSLENILGIWTPLM
VGLIAYMFLGLDALSGQLEEPFGLQENDLPLDSIVRLIERELLHSLGKELPPVIQANGDNLL

Specific function: Unknown

COG id: COG3781

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0187 family [H]

Homologues:

Organism=Escherichia coli, GI87081925, Length=289, Percent_Identity=35.2941176470588, Blast_Score=175, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021134 [H]

Pfam domain/function: PF01062 Bestrophin [H]

EC number: NA

Molecular weight: Translated: 34427; Mature: 34427

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIRNKANSFRLLFAWKGTILPQVLPALVIVMLISAMFGLLNSWHFLNIPTVPSIGFTIF
CCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHH
GVILSIFIGFRNSSCYDRWWEGRKLWGALIATSRHIARDSHILNPLHRERLLHQTMVFSN
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
VLRDRLRHQTTHPHHFLDHGYQDDDIAYFNQHINTPQHILEDMQKDLLTSLQSGEISDII
HHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHH
YSILSQHIVSLGNIQAGCDRIASTPLPYAYSVLLHRAVYCFCFILPFSLENILGIWTPLM
HHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLIAYMFLGLDALSGQLEEPFGLQENDLPLDSIVRLIERELLHSLGKELPPVIQANGDN
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCC
LL
CC
>Mature Secondary Structure
MIIRNKANSFRLLFAWKGTILPQVLPALVIVMLISAMFGLLNSWHFLNIPTVPSIGFTIF
CCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHH
GVILSIFIGFRNSSCYDRWWEGRKLWGALIATSRHIARDSHILNPLHRERLLHQTMVFSN
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
VLRDRLRHQTTHPHHFLDHGYQDDDIAYFNQHINTPQHILEDMQKDLLTSLQSGEISDII
HHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHH
YSILSQHIVSLGNIQAGCDRIASTPLPYAYSVLLHRAVYCFCFILPFSLENILGIWTPLM
HHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLIAYMFLGLDALSGQLEEPFGLQENDLPLDSIVRLIERELLHSLGKELPPVIQANGDN
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCC
LL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]