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The map label for this gene is yraR [H]

Identifier: 50084568

GI number: 50084568

Start: 1385143

End: 1385805

Strand: Direct

Name: yraR [H]

Synonym: ACIAD1390

Alternate gene names: 50084568

Gene position: 1385143-1385805 (Clockwise)

Preceding gene: 50084566

Following gene: 50084569

Centisome position: 38.49

GC content: 36.65

Gene sequence:

>663_bases
ATGACATTTACAAAAAATAAAGCACTGGTTATTGGTGCAACTGGACTGGTTGGAAAATCTTTAGTGGAGCAATTGCAGGA
AGCTTCAGAGTTCGATGCTATCACCGTTATTGTTCGTCAGGAACTTGATGAATTTAAGTCTTTTTCAAAAGTGCAGCAAT
TTGTGCTGGAAGATTTTCTATTACTCAATGATCAGGATGTAAATGGTTATACCCACGCATTTAGTTGTTTAGGTTCTACC
ATAAAAAAAGCGGGATCAAAGCAAAAATTTTATGCAATTGACTATGAAATCAATGCGCATTTTGCTGATCTGATACAGGA
TAAGCAAACACATTTGTTACTGGTGAGTGCTTTAGGCGCGAATTCTTCCTCTATCATCTTTTACAACAGGGTGAAAGGAC
AACTTGAAGATTATTTGCAAACACTCGCATTAAGCAAACTCTCGATATTTCATCCATCTTTGCTGATTGGTGAGCGTCGT
GAGCAGCGTATCTTAGAAAATGTAGCTCAAAAAATATTTTTAGTCGTCAAAGATGTGATTAAGAAACCATTTCGCTATAA
ACCTGTCACGGCACAACAATTGGCTCATACCATGGTTGTCGCTGCAAATACGCAAATGGAAACATTTAAGGTTTATGATA
ATTTAGCGATACAAACAACATAA

Upstream 100 bases:

>100_bases
GGGTAAGTCAAGTCTTGAGATGTTTTTGCAACGTTTTTGATGCTGATAAATTGATAAGAACGCGGTAAATTAACATCAAA
ATACTTAGGATGCATAAAAT

Downstream 100 bases:

>100_bases
TTGGAAATGAAAAACATGACAACGACTGTACCTTTTGTGACTTGTGATTTACTTGATGATCATACTGATAAAGATATTCA
AGTGCTTACGCCATCACTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTFTKNKALVIGATGLVGKSLVEQLQEASEFDAITVIVRQELDEFKSFSKVQQFVLEDFLLLNDQDVNGYTHAFSCLGST
IKKAGSKQKFYAIDYEINAHFADLIQDKQTHLLLVSALGANSSSIIFYNRVKGQLEDYLQTLALSKLSIFHPSLLIGERR
EQRILENVAQKIFLVVKDVIKKPFRYKPVTAQQLAHTMVVAANTQMETFKVYDNLAIQTT

Sequences:

>Translated_220_residues
MTFTKNKALVIGATGLVGKSLVEQLQEASEFDAITVIVRQELDEFKSFSKVQQFVLEDFLLLNDQDVNGYTHAFSCLGST
IKKAGSKQKFYAIDYEINAHFADLIQDKQTHLLLVSALGANSSSIIFYNRVKGQLEDYLQTLALSKLSIFHPSLLIGERR
EQRILENVAQKIFLVVKDVIKKPFRYKPVTAQQLAHTMVVAANTQMETFKVYDNLAIQTT
>Mature_219_residues
TFTKNKALVIGATGLVGKSLVEQLQEASEFDAITVIVRQELDEFKSFSKVQQFVLEDFLLLNDQDVNGYTHAFSCLGSTI
KKAGSKQKFYAIDYEINAHFADLIQDKQTHLLLVSALGANSSSIIFYNRVKGQLEDYLQTLALSKLSIFHPSLLIGERRE
QRILENVAQKIFLVVKDVIKKPFRYKPVTAQQLAHTMVVAANTQMETFKVYDNLAIQTT

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To yeast YER004W [H]

Homologues:

Organism=Homo sapiens, GI148728166, Length=221, Percent_Identity=30.7692307692308, Blast_Score=84, Evalue=7e-17,
Organism=Homo sapiens, GI148728172, Length=221, Percent_Identity=30.7692307692308, Blast_Score=84, Evalue=7e-17,
Organism=Homo sapiens, GI148728168, Length=221, Percent_Identity=30.7692307692308, Blast_Score=84, Evalue=7e-17,
Organism=Homo sapiens, GI148728164, Length=221, Percent_Identity=30.7692307692308, Blast_Score=84, Evalue=7e-17,
Organism=Escherichia coli, GI87082218, Length=196, Percent_Identity=34.1836734693878, Blast_Score=107, Evalue=7e-25,
Organism=Caenorhabditis elegans, GI71983631, Length=213, Percent_Identity=30.5164319248826, Blast_Score=93, Evalue=8e-20,
Organism=Saccharomyces cerevisiae, GI6320840, Length=158, Percent_Identity=32.9113924050633, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000534 [H]

Pfam domain/function: PF01118 Semialdhyde_dh [H]

EC number: NA

Molecular weight: Translated: 24811; Mature: 24680

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFTKNKALVIGATGLVGKSLVEQLQEASEFDAITVIVRQELDEFKSFSKVQQFVLEDFL
CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLNDQDVNGYTHAFSCLGSTIKKAGSKQKFYAIDYEINAHFADLIQDKQTHLLLVSALGA
HCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHCCCCHHEEEEEECCC
NSSSIIFYNRVKGQLEDYLQTLALSKLSIFHPSLLIGERREQRILENVAQKIFLVVKDVI
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH
KKPFRYKPVTAQQLAHTMVVAANTQMETFKVYDNLAIQTT
HCCCCCCCCCHHHHHHHHHEEECCCHHHHHHECCEEEECC
>Mature Secondary Structure 
TFTKNKALVIGATGLVGKSLVEQLQEASEFDAITVIVRQELDEFKSFSKVQQFVLEDFL
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLNDQDVNGYTHAFSCLGSTIKKAGSKQKFYAIDYEINAHFADLIQDKQTHLLLVSALGA
HCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHCCCCHHEEEEEECCC
NSSSIIFYNRVKGQLEDYLQTLALSKLSIFHPSLLIGERREQRILENVAQKIFLVVKDVI
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH
KKPFRYKPVTAQQLAHTMVVAANTQMETFKVYDNLAIQTT
HCCCCCCCCCHHHHHHHHHEEECCCHHHHHHECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]