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The map label for this gene is hslR [H]

Identifier: 50084564

GI number: 50084564

Start: 1381899

End: 1382342

Strand: Reverse

Name: hslR [H]

Synonym: ACIAD1386

Alternate gene names: 50084564

Gene position: 1382342-1381899 (Counterclockwise)

Preceding gene: 50084567

Following gene: 50084563

Centisome position: 38.41

GC content: 37.84

Gene sequence:

>444_bases
ATGTCTAGACAGCAACATGAAGAACATAGTATTGATTCTATGCGAGTTGATAAATGGCTATGGGCTGCTCGTTTCTTTAA
AACACGTTCTATAGCTAAAGCAGCCATCGAAGGCGGAAAAGTTCACCACAATAGTGAACGTGTTAAAGTTTCCAAAGAAA
TTCGGGTAGGAATGGAATTGACCATTCAGCAAGGCTTTGAAAGAAAAACTGTTGTTGTAAAAGCATTATCTAATATGCGG
GGACCTGCACCTATAGCACAACAGCTCTATGATGAAACTGAAGTTAGTATTGCAAAAAGAGAGTTGATTGCTTCGCAAAG
AAAATTGCATAATTTAGCCCGACCAGATCATCGTCCTTCTAAAAAAGATCGACGACAGATTCATCGGTTTAAACAAGAAA
ATGATCAGAATTTTGAGCAGTCGTGGTCATATAATGATGATTAA

Upstream 100 bases:

>100_bases
CCTAGCAAAGAGTCCCTATATTAATAGCTATATTGCATCTTCTATCTTGATACTATCAAAATAGATTCTGTTTGCACTTT
TTCAATTTATAAGGATTTTG

Downstream 100 bases:

>100_bases
ATTTTTTGAATTATGCGCGTCATGTTATGTCGTAGTGACATAATATTGACATAGAATAGTGAAAATAAATCTGTCACTAT
ACTTCGGTGGAACAAGGTTG

Product: heat shock protein 15

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSRQQHEEHSIDSMRVDKWLWAARFFKTRSIAKAAIEGGKVHHNSERVKVSKEIRVGMELTIQQGFERKTVVVKALSNMR
GPAPIAQQLYDETEVSIAKRELIASQRKLHNLARPDHRPSKKDRRQIHRFKQENDQNFEQSWSYNDD

Sequences:

>Translated_147_residues
MSRQQHEEHSIDSMRVDKWLWAARFFKTRSIAKAAIEGGKVHHNSERVKVSKEIRVGMELTIQQGFERKTVVVKALSNMR
GPAPIAQQLYDETEVSIAKRELIASQRKLHNLARPDHRPSKKDRRQIHRFKQENDQNFEQSWSYNDD
>Mature_146_residues
SRQQHEEHSIDSMRVDKWLWAARFFKTRSIAKAAIEGGKVHHNSERVKVSKEIRVGMELTIQQGFERKTVVVKALSNMRG
PAPIAQQLYDETEVSIAKRELIASQRKLHNLARPDHRPSKKDRRQIHRFKQENDQNFEQSWSYNDD

Specific function: Involved in the recycling of free 50S ribosomal subunits that still carry a nascent chain. Binds RNA more specifically than DNA. Binds with very high affinity to the free 50S ribosomal subunit. Does not bind it when it is part of the 70S ribosome [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=120, Percent_Identity=52.5, Blast_Score=125, Evalue=9e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 17305; Mature: 17174

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRQQHEEHSIDSMRVDKWLWAARFFKTRSIAKAAIEGGKVHHNSERVKVSKEIRVGMEL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHH
TIQQGFERKTVVVKALSNMRGPAPIAQQLYDETEVSIAKRELIASQRKLHNLARPDHRPS
HHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KKDRRQIHRFKQENDQNFEQSWSYNDD
HHHHHHHHHHHHCCCCCHHHCCCCCCC
>Mature Secondary Structure 
SRQQHEEHSIDSMRVDKWLWAARFFKTRSIAKAAIEGGKVHHNSERVKVSKEIRVGMEL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHH
TIQQGFERKTVVVKALSNMRGPAPIAQQLYDETEVSIAKRELIASQRKLHNLARPDHRPS
HHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KKDRRQIHRFKQENDQNFEQSWSYNDD
HHHHHHHHHHHHCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]