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The map label for this gene is ydjA [H]

Identifier: 50084498

GI number: 50084498

Start: 1315070

End: 1315654

Strand: Direct

Name: ydjA [H]

Synonym: ACIAD1316

Alternate gene names: 50084498

Gene position: 1315070-1315654 (Clockwise)

Preceding gene: 50084496

Following gene: 50084499

Centisome position: 36.54

GC content: 42.74

Gene sequence:

>585_bases
ATGCCAATGCCAGAATTAGATGCAAGTCTTGTCCATCAAGTGATTTATCAACGTCAATCGATAGGGCAGCTCATTGAGCC
AGCACCTTCTATACAACAACTAGATCAGGCTTTTTCTGCTGCATTGACCGCGCCCGATCATCATCGTTTAAAACCGACTC
GTTTCTTTGTAATAGGCGCCGATCAACGCGCTGCGTTTGGAGAAGTGTTGACTGGGGCATTGAAAGATTTGGGAGAAACA
GATCCTGTACAGCTTGATCGAGTCAAGCATCATCCATTTCGTGCTCCACTTTTAGTGGTTGCGGCAACTCAGTTACAAGA
TCATCCTAAAGTTCCATTTTTTGAGCAGATTTTAAGTACTGGTGCAGCGATACAGAATTTTTTATTGTCTTTACAGGCTC
AGGGTTTTGCGACCATGTGGCGCTCAGGTGCAGTCATTGAATCTTCATGGTTTAAGCAGCACTTCGGTCTCAATGAAAGG
GATATTATTTCTGGAATTATTTATGTTGGTACGGCTGCCAAAGCAATTGCACCCCGTACAGAAATTGATCTACATAATTT
TGTAAAACAATGGTCAGCACAATAA

Upstream 100 bases:

>100_bases
AGTGTCATTTTAAAACTTATGAAAACCTGTAATTGGATGTGTTGGAAATAAACAGGAATATGCTAATCTAACTTGAGTGA
GTTTTTGATTTAGATTAATA

Downstream 100 bases:

>100_bases
AATAAATTGCCAGAACACTTAGGAACAAGAATGACCGATTTAAAATTTACTGATCTCGTTGAACCTGTCGTAATTGATAA
AAAGACAGCATTGCGTGTTA

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MPMPELDASLVHQVIYQRQSIGQLIEPAPSIQQLDQAFSAALTAPDHHRLKPTRFFVIGADQRAAFGEVLTGALKDLGET
DPVQLDRVKHHPFRAPLLVVAATQLQDHPKVPFFEQILSTGAAIQNFLLSLQAQGFATMWRSGAVIESSWFKQHFGLNER
DIISGIIYVGTAAKAIAPRTEIDLHNFVKQWSAQ

Sequences:

>Translated_194_residues
MPMPELDASLVHQVIYQRQSIGQLIEPAPSIQQLDQAFSAALTAPDHHRLKPTRFFVIGADQRAAFGEVLTGALKDLGET
DPVQLDRVKHHPFRAPLLVVAATQLQDHPKVPFFEQILSTGAAIQNFLLSLQAQGFATMWRSGAVIESSWFKQHFGLNER
DIISGIIYVGTAAKAIAPRTEIDLHNFVKQWSAQ
>Mature_193_residues
PMPELDASLVHQVIYQRQSIGQLIEPAPSIQQLDQAFSAALTAPDHHRLKPTRFFVIGADQRAAFGEVLTGALKDLGETD
PVQLDRVKHHPFRAPLLVVAATQLQDHPKVPFFEQILSTGAAIQNFLLSLQAQGFATMWRSGAVIESSWFKQHFGLNERD
IISGIIYVGTAAKAIAPRTEIDLHNFVKQWSAQ

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=159, Percent_Identity=37.7358490566038, Blast_Score=123, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 21515; Mature: 21384

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMPELDASLVHQVIYQRQSIGQLIEPAPSIQQLDQAFSAALTAPDHHRLKPTRFFVIGA
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEC
DQRAAFGEVLTGALKDLGETDPVQLDRVKHHPFRAPLLVVAATQLQDHPKVPFFEQILST
CCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHH
GAAIQNFLLSLQAQGFATMWRSGAVIESSWFKQHFGLNERDIISGIIYVGTAAKAIAPRT
HHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHCCCC
EIDLHNFVKQWSAQ
HHHHHHHHHHHCCC
>Mature Secondary Structure 
PMPELDASLVHQVIYQRQSIGQLIEPAPSIQQLDQAFSAALTAPDHHRLKPTRFFVIGA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEC
DQRAAFGEVLTGALKDLGETDPVQLDRVKHHPFRAPLLVVAATQLQDHPKVPFFEQILST
CCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHH
GAAIQNFLLSLQAQGFATMWRSGAVIESSWFKQHFGLNERDIISGIIYVGTAAKAIAPRT
HHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHCCCC
EIDLHNFVKQWSAQ
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]