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The map label for this gene is cmoA [H]

Identifier: 50084460

GI number: 50084460

Start: 1274947

End: 1275615

Strand: Direct

Name: cmoA [H]

Synonym: ACIAD1274

Alternate gene names: 50084460

Gene position: 1274947-1275615 (Clockwise)

Preceding gene: 50084459

Following gene: 50084461

Centisome position: 35.43

GC content: 35.58

Gene sequence:

>669_bases
ATGGCAAAAGATTTTACTTCACAGCGCGTGGTGGATGGCTACGATCAACATATTCGTCAGTTGATTCCTGGTTACGAAGT
TGTACACCAGCAAATTAAAGCGTTATTGAAAACGTATATGCCGTATAAAGCGCATCTGTTAATTGTGGGATGTGGTACAG
GTTATGAGCTTGGATATTTATTACAAGCCTTTCCAAATTGGCAGTTTACTGCAATTGATGTGTCTTCTACCATGCTTGAT
AAGGCAAAAACTTTTATCCATGCTTTAGGCGAGGATCAGCGCGTTAATTTTGTATTGGGCGATATAAGCCATCTAAATGA
TGATGTTTATTTTGATGCAGTTCTTTCAATACTGGTCACTCATTTTATTCCATTTGAACAAAAATATAATTTTCTACTGG
CTACACAGAAAAAATTAAAACAAGACGGGATTTTTATAACCTTTGATCTGACTCAAATCATAACGCAAAACGAAAAAGAA
ACTTTGAAGCATCTATGTGAGATAAATGGATTAACACCAGAGCAAACAGCGGTCATGCTGAAAAGATTAGATCATGATTT
TTTTCCATTGTCAGAAGAACGAACTTACCAGCTTTTGAGAAATGTAGGTTTTAAAGACATTAACCGTTTTACCCAAATCT
TATGCTACCAAGGTTTTATTGCTCAATAG

Upstream 100 bases:

>100_bases
TCCAGATTTAAAAGACATTTATCAACGTTTAAGTCAAGCCATTATAGCCAGACATCATACTCAACCATAGTTTGAGCAAT
AGAGAAAAGGCAAATATAAG

Downstream 100 bases:

>100_bases
AGAAAACAATCAAAATAACAATATGTTTGAATTAATAATCGCGGATTCATCCGCATAAGTCAGCGTACTTAGCTATTTTG
GATCGCTATTGTGCAATTCT

Product: SAM-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MAKDFTSQRVVDGYDQHIRQLIPGYEVVHQQIKALLKTYMPYKAHLLIVGCGTGYELGYLLQAFPNWQFTAIDVSSTMLD
KAKTFIHALGEDQRVNFVLGDISHLNDDVYFDAVLSILVTHFIPFEQKYNFLLATQKKLKQDGIFITFDLTQIITQNEKE
TLKHLCEINGLTPEQTAVMLKRLDHDFFPLSEERTYQLLRNVGFKDINRFTQILCYQGFIAQ

Sequences:

>Translated_222_residues
MAKDFTSQRVVDGYDQHIRQLIPGYEVVHQQIKALLKTYMPYKAHLLIVGCGTGYELGYLLQAFPNWQFTAIDVSSTMLD
KAKTFIHALGEDQRVNFVLGDISHLNDDVYFDAVLSILVTHFIPFEQKYNFLLATQKKLKQDGIFITFDLTQIITQNEKE
TLKHLCEINGLTPEQTAVMLKRLDHDFFPLSEERTYQLLRNVGFKDINRFTQILCYQGFIAQ
>Mature_221_residues
AKDFTSQRVVDGYDQHIRQLIPGYEVVHQQIKALLKTYMPYKAHLLIVGCGTGYELGYLLQAFPNWQFTAIDVSSTMLDK
AKTFIHALGEDQRVNFVLGDISHLNDDVYFDAVLSILVTHFIPFEQKYNFLLATQKKLKQDGIFITFDLTQIITQNEKET
LKHLCEINGLTPEQTAVMLKRLDHDFFPLSEERTYQLLRNVGFKDINRFTQILCYQGFIAQ

Specific function: Catalyzes the conversion of 5-methoxyuridine (mo5U) to uridine-5-oxyacetic acid (cmo5U) at position 34 in tRNA. May also participate in the methylation of uridine-5-oxyacetic acid (cmo5U) to uridine-5-oxyacetic acid methyl ester (mcmo5U) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013217
- InterPro:   IPR005271 [H]

Pfam domain/function: PF08242 Methyltransf_12 [H]

EC number: NA

Molecular weight: Translated: 25704; Mature: 25573

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKDFTSQRVVDGYDQHIRQLIPGYEVVHQQIKALLKTYMPYKAHLLIVGCGTGYELGYL
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHH
LQAFPNWQFTAIDVSSTMLDKAKTFIHALGEDQRVNFVLGDISHLNDDVYFDAVLSILVT
HHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCHHHHHHHHHHHHH
HFIPFEQKYNFLLATQKKLKQDGIFITFDLTQIITQNEKETLKHLCEINGLTPEQTAVML
HHCCHHHHCCHHHHHHHHHHHCCEEEEEEHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHH
KRLDHDFFPLSEERTYQLLRNVGFKDINRFTQILCYQGFIAQ
HHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AKDFTSQRVVDGYDQHIRQLIPGYEVVHQQIKALLKTYMPYKAHLLIVGCGTGYELGYL
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHH
LQAFPNWQFTAIDVSSTMLDKAKTFIHALGEDQRVNFVLGDISHLNDDVYFDAVLSILVT
HHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCHHHHHHHHHHHHH
HFIPFEQKYNFLLATQKKLKQDGIFITFDLTQIITQNEKETLKHLCEINGLTPEQTAVML
HHCCHHHHCCHHHHHHHHHHHCCEEEEEEHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHH
KRLDHDFFPLSEERTYQLLRNVGFKDINRFTQILCYQGFIAQ
HHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA