Click here to switch to the map view.

The map label for this gene is yfdH [C]

Identifier: 50084313

GI number: 50084313

Start: 1107128

End: 1108108

Strand: Reverse

Name: yfdH [C]

Synonym: ACIAD1119

Alternate gene names: 50084313

Gene position: 1108108-1107128 (Counterclockwise)

Preceding gene: 50084314

Following gene: 50084312

Centisome position: 30.79

GC content: 41.59

Gene sequence:

>981_bases
ATGCAATTAACGCCGTTCTTGTCATGTGTTGTTCCTGCCTACAATGAAGCTGAAAATCTGAAAAAGTTTATTCCAGCCTT
GGCCGCCAATTTAGAACAACAGCAATTAAGCTATGAAATTATTGTGGTTGATGACGGTAGTAGGGACGATACGCTGCATG
TTTTACAATCGATGGTCGATCACTATCCGCTAGTGGTGTTAGAACTATCCCGTAATTTTGGCAAAGAAGCGGCGCTCAGT
GCGGGTCTAGATCGCGTTCGGGGTGACATCACGCTGCTCATTGATGCAGATTTTCAGCATCCACTTGATGCGATTCCGAC
TATGGTCAACTTATGGAAAAACGGCTATGACATGGTATATGGCATTCGAGACAGAAGCAGTGAATCTTGGTTAAAACGTA
TTCTTACCAACAATTATTATAAAGTTCTAAATATGAGCTCACCTATTGATATTCCTGAAAATGCAGGCGATTTTCGTCTG
ATGGATGCCAAAGTAGTCGATGCTGTAAGACGTTTACCCGAGAAAAATCGCTATATGAAAGGCTTGTATGCATGGGTAGG
TTTTAAAAGTATTGGTATTCATTTTTCCGAGCAACAACGTCAATTTGGTCAATCCAGTTTTAATGGCAAAGCATTATTTC
GTCTTGCCATGTCGGGCTTGACGGGCTTTACCGATCTTCCTTTAAGACTGAGTATTTATCTGGGTGCTTTACTTGCTTTA
AGCGCAATGGGATATGGCATTTGGGTGTTGATTGAAACGCTGATTGAAGGAATTAGGGTACCTGGCTGGGCCACCTTAGT
GATTGGTCTGACATTGCTCGGTGGCATACAACTGCTCTTTCTGGGAATTGTGGGAGAATATATTGCACGAATTTATGCCG
AGGTCAAAAATCGGCCTAAATATATTGTGTCGAGTGAATATTCGCACGTAAAAGCTGCTCATCAATTACAAGATTTTGAT
CAACATGTTTCAAAGCCTTAA

Upstream 100 bases:

>100_bases
ATTCGGCACGAGTAGCAGAATACCAATATTTGCAATCTAATCAATTTGAACAGGATTGCCATAAGTTTAATATTCAGCGT
AGCAAAATAGGAGCAATATT

Downstream 100 bases:

>100_bases
AAATTTGCAGATTTTCTGGCAATTTGCCCGCTTTGGTGTGATTGGTATTTGTGCAGCATGTACCCATGTCTGTGTTGTTT
TAGTTCTAACAAAAATGTCT

Product: CPS-53 prophage, bactoprenol glucosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MQLTPFLSCVVPAYNEAENLKKFIPALAANLEQQQLSYEIIVVDDGSRDDTLHVLQSMVDHYPLVVLELSRNFGKEAALS
AGLDRVRGDITLLIDADFQHPLDAIPTMVNLWKNGYDMVYGIRDRSSESWLKRILTNNYYKVLNMSSPIDIPENAGDFRL
MDAKVVDAVRRLPEKNRYMKGLYAWVGFKSIGIHFSEQQRQFGQSSFNGKALFRLAMSGLTGFTDLPLRLSIYLGALLAL
SAMGYGIWVLIETLIEGIRVPGWATLVIGLTLLGGIQLLFLGIVGEYIARIYAEVKNRPKYIVSSEYSHVKAAHQLQDFD
QHVSKP

Sequences:

>Translated_326_residues
MQLTPFLSCVVPAYNEAENLKKFIPALAANLEQQQLSYEIIVVDDGSRDDTLHVLQSMVDHYPLVVLELSRNFGKEAALS
AGLDRVRGDITLLIDADFQHPLDAIPTMVNLWKNGYDMVYGIRDRSSESWLKRILTNNYYKVLNMSSPIDIPENAGDFRL
MDAKVVDAVRRLPEKNRYMKGLYAWVGFKSIGIHFSEQQRQFGQSSFNGKALFRLAMSGLTGFTDLPLRLSIYLGALLAL
SAMGYGIWVLIETLIEGIRVPGWATLVIGLTLLGGIQLLFLGIVGEYIARIYAEVKNRPKYIVSSEYSHVKAAHQLQDFD
QHVSKP
>Mature_326_residues
MQLTPFLSCVVPAYNEAENLKKFIPALAANLEQQQLSYEIIVVDDGSRDDTLHVLQSMVDHYPLVVLELSRNFGKEAALS
AGLDRVRGDITLLIDADFQHPLDAIPTMVNLWKNGYDMVYGIRDRSSESWLKRILTNNYYKVLNMSSPIDIPENAGDFRL
MDAKVVDAVRRLPEKNRYMKGLYAWVGFKSIGIHFSEQQRQFGQSSFNGKALFRLAMSGLTGFTDLPLRLSIYLGALLAL
SAMGYGIWVLIETLIEGIRVPGWATLVIGLTLLGGIQLLFLGIVGEYIARIYAEVKNRPKYIVSSEYSHVKAAHQLQDFD
QHVSKP

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=300, Percent_Identity=41.6666666666667, Blast_Score=246, Evalue=2e-66,
Organism=Escherichia coli, GI1788588, Length=305, Percent_Identity=29.8360655737705, Blast_Score=159, Evalue=2e-40,
Organism=Drosophila melanogaster, GI24585265, Length=120, Percent_Identity=35.8333333333333, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 36645; Mature: 36645

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTPFLSCVVPAYNEAENLKKFIPALAANLEQQQLSYEIIVVDDGSRDDTLHVLQSMVD
CCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHCEEEEEEEECCCCCHHHHHHHHHHH
HYPLVVLELSRNFGKEAALSAGLDRVRGDITLLIDADFQHPLDAIPTMVNLWKNGYDMVY
HCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEE
GIRDRSSESWLKRILTNNYYKVLNMSSPIDIPENAGDFRLMDAKVVDAVRRLPEKNRYMK
EECCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHCCHHHHHHH
GLYAWVGFKSIGIHFSEQQRQFGQSSFNGKALFRLAMSGLTGFTDLPLRLSIYLGALLAL
HHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
SAMGYGIWVLIETLIEGIRVPGWATLVIGLTLLGGIQLLFLGIVGEYIARIYAEVKNRPK
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YIVSSEYSHVKAAHQLQDFDQHVSKP
EEECCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQLTPFLSCVVPAYNEAENLKKFIPALAANLEQQQLSYEIIVVDDGSRDDTLHVLQSMVD
CCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHCEEEEEEEECCCCCHHHHHHHHHHH
HYPLVVLELSRNFGKEAALSAGLDRVRGDITLLIDADFQHPLDAIPTMVNLWKNGYDMVY
HCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEE
GIRDRSSESWLKRILTNNYYKVLNMSSPIDIPENAGDFRLMDAKVVDAVRRLPEKNRYMK
EECCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHCCHHHHHHH
GLYAWVGFKSIGIHFSEQQRQFGQSSFNGKALFRLAMSGLTGFTDLPLRLSIYLGALLAL
HHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
SAMGYGIWVLIETLIEGIRVPGWATLVIGLTLLGGIQLLFLGIVGEYIARIYAEVKNRPK
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YIVSSEYSHVKAAHQLQDFDQHVSKP
EEECCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]