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The map label for this gene is ureD

Identifier: 50084285

GI number: 50084285

Start: 1082910

End: 1083785

Strand: Direct

Name: ureD

Synonym: ACIAD1088

Alternate gene names: 50084285

Gene position: 1082910-1083785 (Clockwise)

Preceding gene: 50084282

Following gene: 50084286

Centisome position: 30.09

GC content: 42.58

Gene sequence:

>876_bases
ATGAATCAACCACAAGACTTTCCACCCCAAAAGTCTAAAGCTTTGTGGTACGCCCAGCTTGAATTAGGATTTAGGTTTGA
TGGTCAACGCACCATTATGAATCATCGTAAGCATCATGGTCCTGTTCGGGTGCAAAAAATGCTATGGCCTGAAAAAACTG
GGGTTTGTCATGCCATCATTGTGCATCCACCAGCAGGAATTGCAGGTGGTGATCATTTAACCTTTCAAGTGTCTACTGAG
CGTAAAGCACATGCGGTGGTTACTACACCAGGTGCTGGAAAATGGTACAAGACCAACGGCAAGCAGGCTTTTCAACATAT
TTATTTAAATATTGCAAATGATTCAACTCTGGAATGGCTACCGCAAGAAACCATGTTGTTTGATGCTGCATATGCTCAAT
CTGAAACCATCATTCATTTAGATCAAACTGCCAGTTTTATGGGTTGGGATATGTTGGTTTTAGGTAGACAGGCACGTTTA
GAAACCTTCGAACAAGGTTGTTACGCCAATCGATTTAAACTTTATCGAAATCACAAGTTATTAGTGGCAGACACATTACG
CTTTAAAGGGAAAGATCGCTGGTTATCATCGTGTTTAGGTATGAACGGTCATGCAGTCATGGGAAGTTTTTGGGCAGTTG
CGCCTGAAAAATATCGCGCGACATTATATTTGGAACAACATATTGAGCTGATTCGTGAACTGATGATGCGGATGGATGTT
CCTGTTACATTGACCTTATTGGATGACGTGGTTTGTGCACGTTTTCTGGGAGATGACGTTCGTGCATGTCACGATGCATT
TGCGGCTATTCGAGCCAGACTCCGTCGTTACTGGTTTGATCTGGATGAAGAGTTTCCACGTATCTGGAGAACTTAA

Upstream 100 bases:

>100_bases
AATTAGACATTCAAATGTTTAATTAGATTATCTGCTAGTTATTGGTGCAAAAATTGCATTACTGATCAGACCAGTATTAT
ATGTGACATAAAGGAACAGA

Downstream 100 bases:

>100_bases
TATATGTTCTTTCCAATAATGCTGTTGAGTCACATGACATATTCAGGTCAACACCACGATATGTGCACATATTTTGCTTA
AATGAATCATCAAGATTAGG

Product: urease accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MNQPQDFPPQKSKALWYAQLELGFRFDGQRTIMNHRKHHGPVRVQKMLWPEKTGVCHAIIVHPPAGIAGGDHLTFQVSTE
RKAHAVVTTPGAGKWYKTNGKQAFQHIYLNIANDSTLEWLPQETMLFDAAYAQSETIIHLDQTASFMGWDMLVLGRQARL
ETFEQGCYANRFKLYRNHKLLVADTLRFKGKDRWLSSCLGMNGHAVMGSFWAVAPEKYRATLYLEQHIELIRELMMRMDV
PVTLTLLDDVVCARFLGDDVRACHDAFAAIRARLRRYWFDLDEEFPRIWRT

Sequences:

>Translated_291_residues
MNQPQDFPPQKSKALWYAQLELGFRFDGQRTIMNHRKHHGPVRVQKMLWPEKTGVCHAIIVHPPAGIAGGDHLTFQVSTE
RKAHAVVTTPGAGKWYKTNGKQAFQHIYLNIANDSTLEWLPQETMLFDAAYAQSETIIHLDQTASFMGWDMLVLGRQARL
ETFEQGCYANRFKLYRNHKLLVADTLRFKGKDRWLSSCLGMNGHAVMGSFWAVAPEKYRATLYLEQHIELIRELMMRMDV
PVTLTLLDDVVCARFLGDDVRACHDAFAAIRARLRRYWFDLDEEFPRIWRT
>Mature_291_residues
MNQPQDFPPQKSKALWYAQLELGFRFDGQRTIMNHRKHHGPVRVQKMLWPEKTGVCHAIIVHPPAGIAGGDHLTFQVSTE
RKAHAVVTTPGAGKWYKTNGKQAFQHIYLNIANDSTLEWLPQETMLFDAAYAQSETIIHLDQTASFMGWDMLVLGRQARL
ETFEQGCYANRFKLYRNHKLLVADTLRFKGKDRWLSSCLGMNGHAVMGSFWAVAPEKYRATLYLEQHIELIRELMMRMDV
PVTLTLLDDVVCARFLGDDVRACHDAFAAIRARLRRYWFDLDEEFPRIWRT

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URED_ACIAD (Q6FD86)

Other databases:

- EMBL:   CR543861
- RefSeq:   YP_045795.1
- STRING:   Q6FD86
- GeneID:   2879203
- GenomeReviews:   CR543861_GR
- KEGG:   aci:ACIAD1088
- NMPDR:   fig|62977.3.peg.1300
- eggNOG:   COG0829
- HOGENOM:   HBG711156
- OMA:   CLGRPVM
- ProtClustDB:   CLSK707194
- BioCyc:   ASP62977:ACIAD1088-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01384
- InterPro:   IPR002669

Pfam domain/function: PF01774 UreD

EC number: NA

Molecular weight: Translated: 33694; Mature: 33694

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQPQDFPPQKSKALWYAQLELGFRFDGQRTIMNHRKHHGPVRVQKMLWPEKTGVCHAII
CCCCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHHHHCCCCEEEHHHHCCCCCCCEEEEE
VHPPAGIAGGDHLTFQVSTERKAHAVVTTPGAGKWYKTNGKQAFQHIYLNIANDSTLEWL
EECCCCCCCCCEEEEEEECCCCCEEEEECCCCCCEEECCCHHEEEEEEEEECCCCCHHHC
PQETMLFDAAYAQSETIIHLDQTASFMGWDMLVLGRQARLETFEQGCYANRFKLYRNHKL
CCHHHHHHHHHCCCCEEEEECCCCCCCCCHHEECCCHHHHHHHHCCCHHHHHHHCCCCEE
LVADTLRFKGKDRWLSSCLGMNGHAVMGSFWAVAPEKYRATLYLEQHIELIRELMMRMDV
EEEECEECCCCHHHHHHHHCCCCCEEHHHHHCCCCCHHEEEEEHHHHHHHHHHHHHHCCC
PVTLTLLDDVVCARFLGDDVRACHDAFAAIRARLRRYWFDLDEEFPRIWRT
CEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
>Mature Secondary Structure
MNQPQDFPPQKSKALWYAQLELGFRFDGQRTIMNHRKHHGPVRVQKMLWPEKTGVCHAII
CCCCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHHHHCCCCEEEHHHHCCCCCCCEEEEE
VHPPAGIAGGDHLTFQVSTERKAHAVVTTPGAGKWYKTNGKQAFQHIYLNIANDSTLEWL
EECCCCCCCCCEEEEEEECCCCCEEEEECCCCCCEEECCCHHEEEEEEEEECCCCCHHHC
PQETMLFDAAYAQSETIIHLDQTASFMGWDMLVLGRQARLETFEQGCYANRFKLYRNHKL
CCHHHHHHHHHCCCCEEEEECCCCCCCCCHHEECCCHHHHHHHHCCCHHHHHHHCCCCEE
LVADTLRFKGKDRWLSSCLGMNGHAVMGSFWAVAPEKYRATLYLEQHIELIRELMMRMDV
EEEECEECCCCHHHHHHHHCCCCCEEHHHHHCCCCCHHEEEEEHHHHHHHHHHHHHHCCC
PVTLTLLDDVVCARFLGDDVRACHDAFAAIRARLRRYWFDLDEEFPRIWRT
CEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA